RNA–Protein interactions for RNA: ENST00000591436.5

TMC6-218, Transcript of transmembrane channel like 6, humanhuman

TSL 1 (best) BASIC

Gene TMC6, Length 1,155 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-218ENST00000591436 RIMS2Q9UQ26 1411 aa34.39■■■■□ 3.1
TMC6-218ENST00000591436 PPP1R15AO75807 674 aaPredicted RBP34.39■■■■□ 3.1
TMC6-218ENST00000591436 SENP3Q9H4L4 574 aaPredicted RBP34.39■■■■□ 3.1
TMC6-218ENST00000591436 ALKQ9UM73 1620 aa34.39■■■■□ 3.1
TMC6-218ENST00000591436 HSPA1LP34931 641 aa34.38■■■■□ 3.09
TMC6-218ENST00000591436 HDGFP51858 240 aaKnown RBP34.38■■■■□ 3.09
TMC6-218ENST00000591436 KCNA6P17658 529 aa34.35■■■■□ 3.09
TMC6-218ENST00000591436 XIRP1Q702N8 1843 aaKnown RBP34.34■■■■□ 3.09
TMC6-218ENST00000591436 NAIPQ13075 1403 aa34.33■■■■□ 3.09
TMC6-218ENST00000591436 PLEKHG1Q9ULL1 1385 aa34.33■■■■□ 3.09
TMC6-218ENST00000591436 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.31■■■■□ 3.08
TMC6-218ENST00000591436 SPHKAPQ2M3C7 1700 aa34.29■■■■□ 3.08
TMC6-218ENST00000591436 NUTM2DQ5VT03 806 aaPredicted RBP34.28■■■■□ 3.08
TMC6-218ENST00000591436 PROSER2Q86WR7 435 aaPredicted RBP34.27■■■■□ 3.08
TMC6-218ENST00000591436 TMEM94Q12767 1356 aa34.26■■■■□ 3.08
TMC6-218ENST00000591436 NWD1Q149M9 1564 aa34.24■■■■□ 3.07
TMC6-218ENST00000591436 HFM1A2PYH4 1435 aa34.22■■■■□ 3.07
TMC6-218ENST00000591436 NKTRP30414 1462 aaKnown RBP34.22■■■■□ 3.07
TMC6-218ENST00000591436 RBM33Q96EV2 1170 aaKnown RBP34.21■■■■□ 3.07
TMC6-218ENST00000591436 TRIM52Q96A61 297 aa34.2■■■■□ 3.07
TMC6-218ENST00000591436 CHD2O14647 1828 aaKnown RBP34.2■■■■□ 3.07
TMC6-218ENST00000591436 ILDR2Q71H61 639 aa34.18■■■■□ 3.06
TMC6-218ENST00000591436 TBX22Q9Y458 520 aa34.18■■■■□ 3.06
TMC6-218ENST00000591436 ADAMTS13Q76LX8 1427 aa34.14■■■■□ 3.06
TMC6-218ENST00000591436 ZNF326Q5BKZ1 582 aaKnown RBP34.14■■■■□ 3.06
TMC6-218ENST00000591436 DIP2AQ14689 1571 aa34.12■■■■□ 3.05
TMC6-218ENST00000591436 CLTCL1P53675 1640 aa34.12■■■■□ 3.05
TMC6-218ENST00000591436 TRPM2O94759 1503 aa34.11■■■■□ 3.05
TMC6-218ENST00000591436 MSH6P52701 1360 aa34.09■■■■□ 3.05
TMC6-218ENST00000591436 MED1Q15648 1581 aaPredicted RBP34.07■■■■□ 3.05
TMC6-218ENST00000591436 SLC4A1APQ9BWU0 796 aaKnown RBP34.07■■■■□ 3.04
TMC6-218ENST00000591436 PIK3R4Q99570 1358 aa34.06■■■■□ 3.04
TMC6-218ENST00000591436 KIF1BO60333 1816 aa34.06■■■■□ 3.04
TMC6-218ENST00000591436 FAM135BQ49AJ0 1406 aa34.05■■■■□ 3.04
TMC6-218ENST00000591436 C14orf37Q86TY3 774 aa34■■■■□ 3.03
TMC6-218ENST00000591436 ROBO1Q9Y6N7 1651 aa33.99■■■■□ 3.03
TMC6-218ENST00000591436 SETBP1Q9Y6X0 1596 aa33.99■■■■□ 3.03
TMC6-218ENST00000591436 NRXN3Q9Y4C0 1643 aa33.99■■■■□ 3.03
TMC6-218ENST00000591436 AMOTL2Q9Y2J4 779 aa33.98■■■■□ 3.03
TMC6-218ENST00000591436 NEXMIFQ5QGS0 1516 aa33.98■■■■□ 3.03
TMC6-218ENST00000591436 NCOA3Q9Y6Q9 1424 aa33.96■■■■□ 3.03
TMC6-218ENST00000591436 PTPRUQ92729 1446 aa33.96■■■■□ 3.03
TMC6-218ENST00000591436 SLAIN2Q9P270 581 aa33.95■■■■□ 3.03
TMC6-218ENST00000591436 FOXD1Q16676 465 aa33.91■■■■□ 3.02
TMC6-218ENST00000591436 SOCS7O14512 581 aa33.9■■■■□ 3.02
TMC6-218ENST00000591436 PHF23Q9BUL5 403 aaPredicted RBP33.9■■■■□ 3.02
TMC6-218ENST00000591436 C19orf44Q9H6X5 657 aa33.88■■■■□ 3.01
TMC6-218ENST00000591436 XRN1Q8IZH2 1706 aaKnown RBP33.87■■■■□ 3.01
TMC6-218ENST00000591436 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.87■■■■□ 3.01
TMC6-218ENST00000591436 METP08581 1390 aa33.87■■■■□ 3.01
TMC6-218ENST00000591436 ATF3P18847 181 aa33.85■■■■□ 3.01
TMC6-218ENST00000591436 VGFO15240 615 aaPredicted RBP33.84■■■■□ 3.01
TMC6-218ENST00000591436 CADPS2Q86UW7 1296 aa33.84■■■■□ 3.01
TMC6-218ENST00000591436 MPHOSPH9Q99550 1183 aa33.84■■■■□ 3.01
TMC6-218ENST00000591436 RPGRIP1LQ68CZ1 1315 aa33.82■■■■□ 3.01
TMC6-218ENST00000591436 PHLPP1O60346 1717 aa33.81■■■■□ 3
TMC6-218ENST00000591436 CCDC144AA2RUR9 1427 aa33.79■■■■□ 3
TMC6-218ENST00000591436 PPLO60437 1756 aa33.78■■■■□ 3
TMC6-218ENST00000591436 SETD5Q9C0A6 1442 aa33.77■■■■□ 3
TMC6-218ENST00000591436 ACIN1Q9UKV3 1341 aaKnown RBP33.74■■■□□ 2.99
TMC6-218ENST00000591436 DCCP43146 1447 aa33.72■■■□□ 2.99
TMC6-218ENST00000591436 SETD1AO15047 1707 aaKnown RBP33.71■■■□□ 2.99
TMC6-218ENST00000591436 RGL3Q3MIN7 710 aa33.7■■■□□ 2.99
TMC6-218ENST00000591436 COL16A1Q07092 1604 aaPredicted RBP33.67■■■□□ 2.98
TMC6-218ENST00000591436 ADGRL3Q9HAR2 1447 aa33.66■■■□□ 2.98
TMC6-218ENST00000591436 JCADQ9P266 1359 aa33.66■■■□□ 2.98
TMC6-218ENST00000591436 SPATA31E1Q6ZUB1 1445 aa33.65■■■□□ 2.98
TMC6-218ENST00000591436 RAB3GAP2Q9H2M9 1393 aa33.64■■■□□ 2.98
TMC6-218ENST00000591436 BRINP3Q76B58 766 aa33.64■■■□□ 2.98
TMC6-218ENST00000591436 AHDC1Q5TGY3 1603 aaPredicted RBP33.64■■■□□ 2.98
TMC6-218ENST00000591436 NALCNQ8IZF0 1738 aa33.63■■■□□ 2.97
TMC6-218ENST00000591436 PTCH1Q13635 1447 aa33.62■■■□□ 2.97
TMC6-218ENST00000591436 ADGRF5Q8IZF2 1346 aa33.62■■■□□ 2.97
TMC6-218ENST00000591436 MST1RQ04912 1400 aa33.62■■■□□ 2.97
TMC6-218ENST00000591436 ROBO2Q9HCK4 1378 aa33.6■■■□□ 2.97
TMC6-218ENST00000591436 RGS17Q9UGC6 210 aaPredicted RBP33.6■■■□□ 2.97
TMC6-218ENST00000591436 ANKRD30BQ9BXX2 1392 aa33.6■■■□□ 2.97
TMC6-218ENST00000591436 IFT172Q9UG01 1749 aa33.59■■■□□ 2.97
TMC6-218ENST00000591436 ASXL1Q8IXJ9 1541 aa33.58■■■□□ 2.97
TMC6-218ENST00000591436 PRAG1Q86YV5 1406 aa33.54■■■□□ 2.96
TMC6-218ENST00000591436 SPATA31A6Q5VVP1 1343 aa33.5■■■□□ 2.95
TMC6-218ENST00000591436 SHPRHQ149N8 1683 aa33.49■■■□□ 2.95
TMC6-218ENST00000591436 NHSL1Q5SYE7 1610 aa33.48■■■□□ 2.95
TMC6-218ENST00000591436 STK26Q9P289 416 aa33.47■■■□□ 2.95
TMC6-218ENST00000591436 PIK3C2GO75747 1445 aa33.46■■■□□ 2.95
TMC6-218ENST00000591436 C1orf167Q5SNV9 1468 aa33.46■■■□□ 2.95
TMC6-218ENST00000591436 MEX3CQ5U5Q3 659 aaKnown RBP33.44■■■□□ 2.94
TMC6-218ENST00000591436 TMEM132EQ6IEE7 984 aa33.44■■■□□ 2.94
TMC6-218ENST00000591436 POTEAQ6S8J7 498 aa33.44■■■□□ 2.94
TMC6-218ENST00000591436 DDX17Q92841 729 aaKnown RBP33.44■■■□□ 2.94
TMC6-218ENST00000591436 LRP6O75581 1613 aa33.43■■■□□ 2.94
TMC6-218ENST00000591436 LRPPRCP42704 1394 aaKnown RBP33.42■■■□□ 2.94
TMC6-218ENST00000591436 TECPR2O15040 1411 aa33.39■■■□□ 2.94
TMC6-218ENST00000591436 LRRC59Q96AG4 307 aaKnown RBP33.39■■■□□ 2.94
TMC6-218ENST00000591436 NUTM2BA6NNL0 878 aaPredicted RBP33.38■■■□□ 2.93
TMC6-218ENST00000591436 NUTM2EB1AL46 878 aaPredicted RBP33.38■■■□□ 2.93
TMC6-218ENST00000591436 WAPLQ7Z5K2 1190 aa33.38■■■□□ 2.93
TMC6-218ENST00000591436 NUTM2AQ8IVF1 878 aaPredicted RBP33.38■■■□□ 2.93
TMC6-218ENST00000591436 ORAI2Q96SN7 254 aa33.38■■■□□ 2.93
TMC6-218ENST00000591436 ABCC11Q96J66 1382 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms