RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 KDM2AQ9Y2K7 1162 aa26.55■■□□□ 1.84
CROCCP3-205ENST00000591316 PPP1R15AO75807 674 aaPredicted RBP26.54■■□□□ 1.84
CROCCP3-205ENST00000591316 MYO5BQ9ULV0 1848 aa26.54■■□□□ 1.84
CROCCP3-205ENST00000591316 DCAF11Q8TEB1 546 aa26.54■■□□□ 1.84
CROCCP3-205ENST00000591316 RIMS2Q9UQ26 1411 aa26.53■■□□□ 1.84
CROCCP3-205ENST00000591316 BCANQ96GW7 911 aa26.52■■□□□ 1.84
CROCCP3-205ENST00000591316 RPGRIP1LQ68CZ1 1315 aa26.52■■□□□ 1.84
CROCCP3-205ENST00000591316 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.51■■□□□ 1.83
CROCCP3-205ENST00000591316 L3MBTL2Q969R5 705 aa26.5■■□□□ 1.83
CROCCP3-205ENST00000591316 KDM5AP29375 1690 aaKnown RBP26.49■■□□□ 1.83
CROCCP3-205ENST00000591316 VGFO15240 615 aaPredicted RBP26.48■■□□□ 1.83
CROCCP3-205ENST00000591316 ARHGAP23Q9P227 1491 aa26.46■■□□□ 1.83
CROCCP3-205ENST00000591316 SLIT1O75093 1534 aa26.46■■□□□ 1.83
CROCCP3-205ENST00000591316 TONSLQ96HA7 1378 aa26.46■■□□□ 1.83
CROCCP3-205ENST00000591316 ZFYVE9O95405 1425 aa26.46■■□□□ 1.83
CROCCP3-205ENST00000591316 ADGRF5Q8IZF2 1346 aa26.44■■□□□ 1.82
CROCCP3-205ENST00000591316 SCAF11Q99590 1463 aaKnown RBP26.43■■□□□ 1.82
CROCCP3-205ENST00000591316 NEXMIFQ5QGS0 1516 aa26.42■■□□□ 1.82
CROCCP3-205ENST00000591316 NEURL4Q96JN8 1562 aa26.41■■□□□ 1.82
CROCCP3-205ENST00000591316 SLC26A8Q96RN1 970 aa26.39■■□□□ 1.82
CROCCP3-205ENST00000591316 NPHP4O75161 1426 aaPredicted RBP26.36■■□□□ 1.81
CROCCP3-205ENST00000591316 STAC3Q96MF2 364 aa26.36■■□□□ 1.81
CROCCP3-205ENST00000591316 DMRT2Q9Y5R5 561 aa26.35■■□□□ 1.81
CROCCP3-205ENST00000591316 PLEKHG1Q9ULL1 1385 aa26.35■■□□□ 1.81
CROCCP3-205ENST00000591316 STRCQ7RTU9 1775 aa26.35■■□□□ 1.81
CROCCP3-205ENST00000591316 PPLO60437 1756 aa26.34■■□□□ 1.81
CROCCP3-205ENST00000591316 TIMELESSQ9UNS1 1208 aa26.33■■□□□ 1.8
CROCCP3-205ENST00000591316 MED14O60244 1454 aa26.31■■□□□ 1.8
CROCCP3-205ENST00000591316 CFAP70Q5T0N1 1121 aa26.31■■□□□ 1.8
CROCCP3-205ENST00000591316 POLR1AO95602 1720 aaPredicted RBP26.3■■□□□ 1.8
CROCCP3-205ENST00000591316 IFT172Q9UG01 1749 aa26.29■■□□□ 1.8
CROCCP3-205ENST00000591316 NBPF8Q3BBV2 869 aa26.28■■□□□ 1.8
CROCCP3-205ENST00000591316 MYOM2P54296 1465 aa26.28■■□□□ 1.8
CROCCP3-205ENST00000591316 TBX22Q9Y458 520 aa26.27■■□□□ 1.8
CROCCP3-205ENST00000591316 C14orf93Q9H972 538 aaKnown RBP26.26■■□□□ 1.79
CROCCP3-205ENST00000591316 TMEM132EQ6IEE7 984 aa26.25■■□□□ 1.79
CROCCP3-205ENST00000591316 IQGAP1P46940 1657 aa26.24■■□□□ 1.79
CROCCP3-205ENST00000591316 PIK3C2GO75747 1445 aa26.24■■□□□ 1.79
CROCCP3-205ENST00000591316 ADAMTS13Q76LX8 1427 aa26.24■■□□□ 1.79
CROCCP3-205ENST00000591316 NRXN1Q9ULB1 1477 aa26.23■■□□□ 1.79
CROCCP3-205ENST00000591316 PRAG1Q86YV5 1406 aa26.22■■□□□ 1.79
CROCCP3-205ENST00000591316 METP08581 1390 aa26.21■■□□□ 1.79
CROCCP3-205ENST00000591316 NBPF1Q3BBV0 1214 aa26.2■■□□□ 1.79
CROCCP3-205ENST00000591316 SETBP1Q9Y6X0 1596 aa26.2■■□□□ 1.78
CROCCP3-205ENST00000591316 ALKQ9UM73 1620 aa26.19■■□□□ 1.78
CROCCP3-205ENST00000591316 NRXN3Q9Y4C0 1643 aa26.18■■□□□ 1.78
CROCCP3-205ENST00000591316 STK26Q9P289 416 aa26.18■■□□□ 1.78
CROCCP3-205ENST00000591316 ZNF335Q9H4Z2 1342 aaPredicted RBP26.17■■□□□ 1.78
CROCCP3-205ENST00000591316 AMOTL2Q9Y2J4 779 aa26.16■■□□□ 1.78
CROCCP3-205ENST00000591316 KCNA6P17658 529 aa26.13■■□□□ 1.77
CROCCP3-205ENST00000591316 ROCK2O75116 1388 aaKnown RBP26.1■■□□□ 1.77
CROCCP3-205ENST00000591316 TRAK1Q9UPV9 953 aa26.1■■□□□ 1.77
CROCCP3-205ENST00000591316 PTPRUQ92729 1446 aa26.1■■□□□ 1.77
CROCCP3-205ENST00000591316 DIP2AQ14689 1571 aa26.1■■□□□ 1.77
CROCCP3-205ENST00000591316 RBM33Q96EV2 1170 aaKnown RBP26.08■■□□□ 1.77
CROCCP3-205ENST00000591316 PIK3R4Q99570 1358 aa26.08■■□□□ 1.77
CROCCP3-205ENST00000591316 CARD11Q9BXL7 1154 aa26.07■■□□□ 1.76
CROCCP3-205ENST00000591316 PROSER2Q86WR7 435 aaPredicted RBP26.05■■□□□ 1.76
CROCCP3-205ENST00000591316 YTHDC2Q9H6S0 1430 aaKnown RBP26.05■■□□□ 1.76
CROCCP3-205ENST00000591316 SETD1AO15047 1707 aaKnown RBP26.05■■□□□ 1.76
CROCCP3-205ENST00000591316 ZEB1P37275 1124 aaPredicted RBP26.04■■□□□ 1.76
CROCCP3-205ENST00000591316 ASXL1Q8IXJ9 1541 aa26.04■■□□□ 1.76
CROCCP3-205ENST00000591316 LRPPRCP42704 1394 aaKnown RBP26.03■■□□□ 1.76
CROCCP3-205ENST00000591316 LAMC1P11047 1609 aa26.03■■□□□ 1.76
CROCCP3-205ENST00000591316 TRPM1Q7Z4N2 1603 aa26.02■■□□□ 1.76
CROCCP3-205ENST00000591316 WAPLQ7Z5K2 1190 aa26.02■■□□□ 1.76
CROCCP3-205ENST00000591316 ADGRB1O14514 1584 aa26.02■■□□□ 1.76
CROCCP3-205ENST00000591316 ABCC11Q96J66 1382 aa26■■□□□ 1.75
CROCCP3-205ENST00000591316 SAFB2Q14151 953 aaKnown RBP eCLIP26■■□□□ 1.75
CROCCP3-205ENST00000591316 CHD2O14647 1828 aaKnown RBP26■■□□□ 1.75
CROCCP3-205ENST00000591316 KIAA1210Q9ULL0 1709 aa26■■□□□ 1.75
CROCCP3-205ENST00000591316 RALGAPBQ86X10 1494 aa26■■□□□ 1.75
CROCCP3-205ENST00000591316 POGKQ9P215 609 aa25.99■■□□□ 1.75
CROCCP3-205ENST00000591316 ROBO2Q9HCK4 1378 aa25.98■■□□□ 1.75
CROCCP3-205ENST00000591316 PRAM1Q96QH2 718 aa25.98■■□□□ 1.75
CROCCP3-205ENST00000591316 STRCP1A6NGW2 1772 aa25.96■■□□□ 1.75
CROCCP3-205ENST00000591316 C14orf37Q86TY3 774 aa25.96■■□□□ 1.75
CROCCP3-205ENST00000591316 GPRASP1Q5JY77 1395 aa25.95■■□□□ 1.74
CROCCP3-205ENST00000591316 PLEKHH1Q9ULM0 1364 aa25.93■■□□□ 1.74
CROCCP3-205ENST00000591316 SIRT1Q96EB6 747 aa25.93■■□□□ 1.74
CROCCP3-205ENST00000591316 TMEM94Q12767 1356 aa25.93■■□□□ 1.74
CROCCP3-205ENST00000591316 NWD1Q149M9 1564 aa25.92■■□□□ 1.74
CROCCP3-205ENST00000591316 LTBP4Q8N2S1 1624 aa25.91■■□□□ 1.74
CROCCP3-205ENST00000591316 XRN1Q8IZH2 1706 aaKnown RBP25.9■■□□□ 1.74
CROCCP3-205ENST00000591316 TECPR2O15040 1411 aa25.9■■□□□ 1.74
CROCCP3-205ENST00000591316 LRRC7Q96NW7 1537 aa25.89■■□□□ 1.74
CROCCP3-205ENST00000591316 NKTRP30414 1462 aaKnown RBP25.89■■□□□ 1.74
CROCCP3-205ENST00000591316 CPS1P31327 1500 aa25.89■■□□□ 1.73
CROCCP3-205ENST00000591316 PTCH1Q13635 1447 aa25.88■■□□□ 1.73
CROCCP3-205ENST00000591316 HIRIP3Q9BW71 556 aaPredicted RBP25.87■■□□□ 1.73
CROCCP3-205ENST00000591316 MINK1Q8N4C8 1332 aaPredicted RBP25.87■■□□□ 1.73
CROCCP3-205ENST00000591316 CENPJQ9HC77 1338 aaPredicted RBP25.87■■□□□ 1.73
CROCCP3-205ENST00000591316 FAM135BQ49AJ0 1406 aa25.87■■□□□ 1.73
CROCCP3-205ENST00000591316 ST20-MTHFSA0A0A6YYL1 179 aa25.86■■□□□ 1.73
CROCCP3-205ENST00000591316 USP47Q96K76 1375 aa25.85■■□□□ 1.73
CROCCP3-205ENST00000591316 EIF4G2P78344 907 aaKnown RBP eCLIP25.85■■□□□ 1.73
CROCCP3-205ENST00000591316 CERKQ8TCT0 537 aa25.85■■□□□ 1.73
CROCCP3-205ENST00000591316 EIF3AQ14152 1382 aaKnown RBP25.84■■□□□ 1.73
CROCCP3-205ENST00000591316 DLC1Q96QB1 1528 aa25.84■■□□□ 1.73
CROCCP3-205ENST00000591316 C19orf44Q9H6X5 657 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms