RNA–Protein interactions for RNA: ENST00000591157.1

TMED1-206, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-206ENST00000591157 EID1Q9Y6B2 187 aa24.33■■□□□ 1.49
TMED1-206ENST00000591157 ANKRD30BQ9BXX2 1392 aa24.3■■□□□ 1.48
TMED1-206ENST00000591157 NEXMIFQ5QGS0 1516 aa24.29■■□□□ 1.48
TMED1-206ENST00000591157 ZNF326Q5BKZ1 582 aaKnown RBP24.28■■□□□ 1.48
TMED1-206ENST00000591157 NUTM2DQ5VT03 806 aaPredicted RBP24.28■■□□□ 1.48
TMED1-206ENST00000591157 PPP1R15AO75807 674 aaPredicted RBP24.26■■□□□ 1.47
TMED1-206ENST00000591157 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
TMED1-206ENST00000591157 SPATA31E1Q6ZUB1 1445 aa24.26■■□□□ 1.47
TMED1-206ENST00000591157 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
TMED1-206ENST00000591157 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.23■■□□□ 1.47
TMED1-206ENST00000591157 PLEKHG1Q9ULL1 1385 aa24.23■■□□□ 1.47
TMED1-206ENST00000591157 PPLO60437 1756 aa24.22■■□□□ 1.47
TMED1-206ENST00000591157 ZNF335Q9H4Z2 1342 aaPredicted RBP24.22■■□□□ 1.47
TMED1-206ENST00000591157 HDGFP51858 240 aaKnown RBP24.22■■□□□ 1.47
TMED1-206ENST00000591157 DHX57Q6P158 1386 aaKnown RBP24.21■■□□□ 1.47
TMED1-206ENST00000591157 LTBP4Q8N2S1 1624 aa24.2■■□□□ 1.46
TMED1-206ENST00000591157 IFT172Q9UG01 1749 aa24.19■■□□□ 1.46
TMED1-206ENST00000591157 RGL3Q3MIN7 710 aa24.19■■□□□ 1.46
TMED1-206ENST00000591157 BCANQ96GW7 911 aa24.18■■□□□ 1.46
TMED1-206ENST00000591157 NRXN3Q9Y4C0 1643 aa24.17■■□□□ 1.46
TMED1-206ENST00000591157 SLC26A8Q96RN1 970 aa24.17■■□□□ 1.46
TMED1-206ENST00000591157 STRCP1A6NGW2 1772 aa24.16■■□□□ 1.46
TMED1-206ENST00000591157 RPGRIP1LQ68CZ1 1315 aa24.15■■□□□ 1.46
TMED1-206ENST00000591157 ADAMTS13Q76LX8 1427 aa24.15■■□□□ 1.46
TMED1-206ENST00000591157 SETBP1Q9Y6X0 1596 aa24.15■■□□□ 1.46
TMED1-206ENST00000591157 DIP2AQ14689 1571 aa24.13■■□□□ 1.45
TMED1-206ENST00000591157 VGFO15240 615 aaPredicted RBP24.09■■□□□ 1.45
TMED1-206ENST00000591157 CPS1P31327 1500 aa24.09■■□□□ 1.45
TMED1-206ENST00000591157 ADGRF5Q8IZF2 1346 aa24.08■■□□□ 1.44
TMED1-206ENST00000591157 NWD1Q149M9 1564 aa24.08■■□□□ 1.44
TMED1-206ENST00000591157 CERKQ8TCT0 537 aa24.06■■□□□ 1.44
TMED1-206ENST00000591157 TBX22Q9Y458 520 aa24.06■■□□□ 1.44
TMED1-206ENST00000591157 SETD1AO15047 1707 aaKnown RBP24.06■■□□□ 1.44
TMED1-206ENST00000591157 MYOM2P54296 1465 aa24.06■■□□□ 1.44
TMED1-206ENST00000591157 CHD2O14647 1828 aaKnown RBP24.05■■□□□ 1.44
TMED1-206ENST00000591157 ALKQ9UM73 1620 aa24.03■■□□□ 1.44
TMED1-206ENST00000591157 SIN3AQ96ST3 1273 aa24.03■■□□□ 1.44
TMED1-206ENST00000591157 PIK3C2GO75747 1445 aa24.01■■□□□ 1.43
TMED1-206ENST00000591157 NRXN1Q9ULB1 1477 aa24.01■■□□□ 1.43
TMED1-206ENST00000591157 KCNA6P17658 529 aa24.01■■□□□ 1.43
TMED1-206ENST00000591157 METP08581 1390 aa24.01■■□□□ 1.43
TMED1-206ENST00000591157 LRRC7Q96NW7 1537 aa24■■□□□ 1.43
TMED1-206ENST00000591157 PTPRUQ92729 1446 aa24■■□□□ 1.43
TMED1-206ENST00000591157 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
TMED1-206ENST00000591157 PIK3R4Q99570 1358 aa23.99■■□□□ 1.43
TMED1-206ENST00000591157 XRN1Q8IZH2 1706 aaKnown RBP23.98■■□□□ 1.43
TMED1-206ENST00000591157 NEUROD1Q13562 356 aa23.98■■□□□ 1.43
TMED1-206ENST00000591157 DCAF11Q8TEB1 546 aa23.98■■□□□ 1.43
TMED1-206ENST00000591157 IQSEC2Q5JU85 1478 aa23.97■■□□□ 1.43
TMED1-206ENST00000591157 KDM2AQ9Y2K7 1162 aa23.97■■□□□ 1.43
TMED1-206ENST00000591157 XIRP1Q702N8 1843 aaKnown RBP23.96■■□□□ 1.43
TMED1-206ENST00000591157 ASXL1Q8IXJ9 1541 aa23.95■■□□□ 1.43
TMED1-206ENST00000591157 LAMC1P11047 1609 aa23.94■■□□□ 1.42
TMED1-206ENST00000591157 AMOTL2Q9Y2J4 779 aa23.92■■□□□ 1.42
TMED1-206ENST00000591157 TMEM94Q12767 1356 aa23.91■■□□□ 1.42
TMED1-206ENST00000591157 RBM33Q96EV2 1170 aaKnown RBP23.91■■□□□ 1.42
TMED1-206ENST00000591157 PROSER2Q86WR7 435 aaPredicted RBP23.9■■□□□ 1.42
TMED1-206ENST00000591157 CFAP70Q5T0N1 1121 aa23.89■■□□□ 1.41
TMED1-206ENST00000591157 L3MBTL2Q969R5 705 aa23.89■■□□□ 1.41
TMED1-206ENST00000591157 C14orf93Q9H972 538 aaKnown RBP23.88■■□□□ 1.41
TMED1-206ENST00000591157 TMEM132EQ6IEE7 984 aa23.86■■□□□ 1.41
TMED1-206ENST00000591157 STAC3Q96MF2 364 aa23.86■■□□□ 1.41
TMED1-206ENST00000591157 PRAG1Q86YV5 1406 aa23.85■■□□□ 1.41
TMED1-206ENST00000591157 PTCH1Q13635 1447 aa23.84■■□□□ 1.41
TMED1-206ENST00000591157 ADGRB1O14514 1584 aa23.84■■□□□ 1.41
TMED1-206ENST00000591157 KNDC1Q76NI1 1749 aa23.84■■□□□ 1.41
TMED1-206ENST00000591157 LRPPRCP42704 1394 aaKnown RBP23.82■■□□□ 1.4
TMED1-206ENST00000591157 TONSLQ96HA7 1378 aa23.82■■□□□ 1.4
TMED1-206ENST00000591157 ROBO2Q9HCK4 1378 aa23.82■■□□□ 1.4
TMED1-206ENST00000591157 FBXO41Q8TF61 875 aa23.82■■□□□ 1.4
TMED1-206ENST00000591157 YTHDC2Q9H6S0 1430 aaKnown RBP23.82■■□□□ 1.4
TMED1-206ENST00000591157 STK26Q9P289 416 aa23.81■■□□□ 1.4
TMED1-206ENST00000591157 UBAP1LF5GYI3 381 aa23.8■■□□□ 1.4
TMED1-206ENST00000591157 TECPR2O15040 1411 aa23.8■■□□□ 1.4
TMED1-206ENST00000591157 KIAA1210Q9ULL0 1709 aa23.8■■□□□ 1.4
TMED1-206ENST00000591157 CCER1Q8TC90 406 aaPredicted RBP23.79■■□□□ 1.4
TMED1-206ENST00000591157 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
TMED1-206ENST00000591157 CLSPNQ9HAW4 1339 aa23.78■■□□□ 1.4
TMED1-206ENST00000591157 NCOA3Q9Y6Q9 1424 aa23.77■■□□□ 1.4
TMED1-206ENST00000591157 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
TMED1-206ENST00000591157 MSH6P52701 1360 aa23.77■■□□□ 1.4
TMED1-206ENST00000591157 ABCC11Q96J66 1382 aa23.77■■□□□ 1.4
TMED1-206ENST00000591157 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.76■■□□□ 1.39
TMED1-206ENST00000591157 TRPM1Q7Z4N2 1603 aa23.74■■□□□ 1.39
TMED1-206ENST00000591157 ILDR1Q86SU0 546 aaPredicted RBP23.74■■□□□ 1.39
TMED1-206ENST00000591157 ADGRL3Q9HAR2 1447 aa23.74■■□□□ 1.39
TMED1-206ENST00000591157 TOM1O60784 492 aa23.73■■□□□ 1.39
TMED1-206ENST00000591157 PLEKHH1Q9ULM0 1364 aa23.73■■□□□ 1.39
TMED1-206ENST00000591157 DLC1Q96QB1 1528 aa23.72■■□□□ 1.39
TMED1-206ENST00000591157 NBPF1Q3BBV0 1214 aa23.71■■□□□ 1.39
TMED1-206ENST00000591157 WAPLQ7Z5K2 1190 aa23.71■■□□□ 1.39
TMED1-206ENST00000591157 PIP4K2BP78356 416 aa23.7■■□□□ 1.38
TMED1-206ENST00000591157 NBPF8Q3BBV2 869 aa23.7■■□□□ 1.38
TMED1-206ENST00000591157 ARHGEF28Q8N1W1 1705 aaKnown RBP23.7■■□□□ 1.38
TMED1-206ENST00000591157 FAM135BQ49AJ0 1406 aa23.69■■□□□ 1.38
TMED1-206ENST00000591157 SCAF1Q9H7N4 1312 aaKnown RBP23.69■■□□□ 1.38
TMED1-206ENST00000591157 C19orf44Q9H6X5 657 aa23.69■■□□□ 1.38
TMED1-206ENST00000591157 TRAK1Q9UPV9 953 aa23.69■■□□□ 1.38
TMED1-206ENST00000591157 DCCP43146 1447 aa23.67■■□□□ 1.38
TMED1-206ENST00000591157 PRAM1Q96QH2 718 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms