RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 PLEKHH2Q8IVE3 1493 aa14.01□□□□□ -0.17
LINC01140-210ENST00000590653 PLA2R1Q13018 1463 aa14.01□□□□□ -0.17
LINC01140-210ENST00000590653 RSPH6AQ9H0K4 717 aa14.01□□□□□ -0.17
LINC01140-210ENST00000590653 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
LINC01140-210ENST00000590653 ATP10BO94823 1461 aa14□□□□□ -0.17
LINC01140-210ENST00000590653 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
LINC01140-210ENST00000590653 TRPM1Q7Z4N2 1603 aa13.99□□□□□ -0.17
LINC01140-210ENST00000590653 CGNL1Q0VF96 1302 aa13.99□□□□□ -0.17
LINC01140-210ENST00000590653 CROCC2H7BZ55 1655 aa13.99□□□□□ -0.17
LINC01140-210ENST00000590653 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
LINC01140-210ENST00000590653 NAP1L5Q96NT1 182 aaPredicted RBP13.98□□□□□ -0.17
LINC01140-210ENST00000590653 PTPRGP23470 1445 aa13.98□□□□□ -0.17
LINC01140-210ENST00000590653 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
LINC01140-210ENST00000590653 PCDHB15Q9Y5E8 787 aa13.98□□□□□ -0.17
LINC01140-210ENST00000590653 NKTRP30414 1462 aaKnown RBP13.98□□□□□ -0.17
LINC01140-210ENST00000590653 TBC1D2Q9BYX2 928 aa13.98□□□□□ -0.17
LINC01140-210ENST00000590653 PDZRN3Q9UPQ7 1066 aa13.98□□□□□ -0.17
LINC01140-210ENST00000590653 PANK2Q9BZ23 570 aa13.97□□□□□ -0.17
LINC01140-210ENST00000590653 MAPK8IP3Q9UPT6 1336 aa13.97□□□□□ -0.17
LINC01140-210ENST00000590653 RLBP1P12271 317 aa13.97□□□□□ -0.17
LINC01140-210ENST00000590653 MFAP1P55081 439 aaKnown RBP13.97□□□□□ -0.17
LINC01140-210ENST00000590653 EIF3AQ14152 1382 aaKnown RBP13.96□□□□□ -0.17
LINC01140-210ENST00000590653 WWC1Q8IX03 1113 aa13.96□□□□□ -0.17
LINC01140-210ENST00000590653 TRMT2AQ8IZ69 625 aaKnown RBP13.96□□□□□ -0.17
LINC01140-210ENST00000590653 CDC42BPAQ5VT25 1732 aa13.96□□□□□ -0.17
LINC01140-210ENST00000590653 SENP3Q9H4L4 574 aaPredicted RBP13.96□□□□□ -0.18
LINC01140-210ENST00000590653 ABCC10Q5T3U5 1492 aa13.95□□□□□ -0.18
LINC01140-210ENST00000590653 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
LINC01140-210ENST00000590653 WDR7Q9Y4E6 1490 aa13.95□□□□□ -0.18
LINC01140-210ENST00000590653 PDE3AQ14432 1141 aa13.95□□□□□ -0.18
LINC01140-210ENST00000590653 L1TD1Q5T7N2 865 aaKnown RBP13.95□□□□□ -0.18
LINC01140-210ENST00000590653 CCDC141Q6ZP82 1450 aa13.95□□□□□ -0.18
LINC01140-210ENST00000590653 GOLGA6L3A6NEY3 463 aa13.95□□□□□ -0.18
LINC01140-210ENST00000590653 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
LINC01140-210ENST00000590653 INSRP06213 1382 aa13.94□□□□□ -0.18
LINC01140-210ENST00000590653 XRCC6P12956 609 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC01140-210ENST00000590653 CFAP70Q5T0N1 1121 aa13.93□□□□□ -0.18
LINC01140-210ENST00000590653 RSPH4AQ5TD94 716 aa13.93□□□□□ -0.18
LINC01140-210ENST00000590653 CARD14Q9BXL6 1004 aa13.93□□□□□ -0.18
LINC01140-210ENST00000590653 PRDM15P57071 1507 aaPredicted RBP13.92□□□□□ -0.18
LINC01140-210ENST00000590653 EIF4G3O43432 1585 aaKnown RBP13.92□□□□□ -0.18
LINC01140-210ENST00000590653 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
LINC01140-210ENST00000590653 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
LINC01140-210ENST00000590653 TCP11L2Q8N4U5 519 aa13.92□□□□□ -0.18
LINC01140-210ENST00000590653 PMFBP1Q8TBY8 1022 aa13.92□□□□□ -0.18
LINC01140-210ENST00000590653 ANTXR1Q9H6X2 564 aa13.92□□□□□ -0.18
LINC01140-210ENST00000590653 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
LINC01140-210ENST00000590653 TBC1D32Q96NH3 1257 aa13.91□□□□□ -0.18
LINC01140-210ENST00000590653 PNNQ9H307 717 aaKnown RBP13.9□□□□□ -0.18
LINC01140-210ENST00000590653 FTSJ3Q8IY81 847 aaKnown RBP13.9□□□□□ -0.18
LINC01140-210ENST00000590653 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.18
LINC01140-210ENST00000590653 MCM4P33991 863 aa13.9□□□□□ -0.18
LINC01140-210ENST00000590653 RWDD1Q9H446 243 aaPredicted RBP13.9□□□□□ -0.18
LINC01140-210ENST00000590653 SYCP2Q9BX26 1530 aa13.89□□□□□ -0.19
LINC01140-210ENST00000590653 ASXL1Q8IXJ9 1541 aa13.89□□□□□ -0.19
LINC01140-210ENST00000590653 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
LINC01140-210ENST00000590653 ARHGAP5Q13017 1502 aa13.88□□□□□ -0.19
LINC01140-210ENST00000590653 TRAK2O60296 914 aa13.88□□□□□ -0.19
LINC01140-210ENST00000590653 C22orf23Q9BZE7 217 aa13.88□□□□□ -0.19
LINC01140-210ENST00000590653 TSR2Q969E8 191 aaKnown RBP13.87□□□□□ -0.19
LINC01140-210ENST00000590653 SLC12A5Q9H2X9 1139 aa13.87□□□□□ -0.19
LINC01140-210ENST00000590653 PIK3C2GO75747 1445 aa13.86□□□□□ -0.19
LINC01140-210ENST00000590653 AFAP1Q8N556 730 aa13.86□□□□□ -0.19
LINC01140-210ENST00000590653 TRAK1Q9UPV9 953 aa13.86□□□□□ -0.19
LINC01140-210ENST00000590653 SYNJ2O15056 1496 aa13.86□□□□□ -0.19
LINC01140-210ENST00000590653 U2AF1L5P0DN76 240 aaPredicted RBP13.85□□□□□ -0.19
LINC01140-210ENST00000590653 U2AF1Q01081 240 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC01140-210ENST00000590653 SAMD9LQ8IVG5 1584 aa13.85□□□□□ -0.19
LINC01140-210ENST00000590653 MTHFSP49914 203 aa13.85□□□□□ -0.19
LINC01140-210ENST00000590653 ITPRIPQ8IWB1 547 aa13.85□□□□□ -0.19
LINC01140-210ENST00000590653 RUNDC1Q96C34 613 aa13.85□□□□□ -0.19
LINC01140-210ENST00000590653 CHMP5Q9NZZ3 219 aa13.84□□□□□ -0.19
LINC01140-210ENST00000590653 HSCBQ8IWL3 235 aa13.83□□□□□ -0.2
LINC01140-210ENST00000590653 SMC4Q9NTJ3 1288 aa13.83□□□□□ -0.2
LINC01140-210ENST00000590653 ABCA8O94911 1581 aa13.83□□□□□ -0.2
LINC01140-210ENST00000590653 HSP90AA1P07900 732 aaKnown RBP13.83□□□□□ -0.2
LINC01140-210ENST00000590653 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.2
LINC01140-210ENST00000590653 SCAF11Q99590 1463 aaKnown RBP13.83□□□□□ -0.2
LINC01140-210ENST00000590653 MYH16Q9H6N6 1097 aa13.82□□□□□ -0.2
LINC01140-210ENST00000590653 NUP160Q12769 1436 aa13.82□□□□□ -0.2
LINC01140-210ENST00000590653 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
LINC01140-210ENST00000590653 U2SURPO15042 1029 aaKnown RBP13.82□□□□□ -0.2
LINC01140-210ENST00000590653 VSIG10Q8N0Z9 540 aa13.82□□□□□ -0.2
LINC01140-210ENST00000590653 DZIP1LQ8IYY4 767 aaKnown RBP13.81□□□□□ -0.2
LINC01140-210ENST00000590653 ARHGEF5Q12774 1597 aa13.81□□□□□ -0.2
LINC01140-210ENST00000590653 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
LINC01140-210ENST00000590653 KIF3BO15066 747 aa13.81□□□□□ -0.2
LINC01140-210ENST00000590653 SAFB2Q14151 953 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC01140-210ENST00000590653 ZKSCAN2Q63HK3 967 aa13.81□□□□□ -0.2
LINC01140-210ENST00000590653 EIF2AK4Q9P2K8 1649 aaKnown RBP13.81□□□□□ -0.2
LINC01140-210ENST00000590653 MVPQ14764 893 aaKnown RBP13.8□□□□□ -0.2
LINC01140-210ENST00000590653 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
LINC01140-210ENST00000590653 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
LINC01140-210ENST00000590653 NUTM2DQ5VT03 806 aaPredicted RBP13.8□□□□□ -0.2
LINC01140-210ENST00000590653 LNPKQ9C0E8 428 aa13.8□□□□□ -0.2
LINC01140-210ENST00000590653 EFCAB2Q5VUJ9 269 aa13.79□□□□□ -0.2
LINC01140-210ENST00000590653 TRIM44Q96DX7 344 aaPredicted RBP13.79□□□□□ -0.2
LINC01140-210ENST00000590653 SPAG9O60271 1321 aaKnown RBP13.79□□□□□ -0.2
LINC01140-210ENST00000590653 HSP90AB1P08238 724 aaKnown RBP13.79□□□□□ -0.2
LINC01140-210ENST00000590653 EXOSC9Q06265 439 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms