RNA–Protein interactions for RNA: ENST00000590431.6

TM6SF2-204, Transcript of transmembrane 6 superfamily member 2, humanhuman

TSL 3

Gene TM6SF2, Length 737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF2-204ENST00000590431 BCANQ96GW7 911 aa16.59■□□□□ 0.25
TM6SF2-204ENST00000590431 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
TM6SF2-204ENST00000590431 NUP155O75694 1391 aa16.58■□□□□ 0.24
TM6SF2-204ENST00000590431 RBM33Q96EV2 1170 aaKnown RBP16.57■□□□□ 0.24
TM6SF2-204ENST00000590431 NUTM2DQ5VT03 806 aaPredicted RBP16.55■□□□□ 0.24
TM6SF2-204ENST00000590431 RIMS2Q9UQ26 1411 aa16.54■□□□□ 0.24
TM6SF2-204ENST00000590431 PPP1R15AO75807 674 aaPredicted RBP16.54■□□□□ 0.24
TM6SF2-204ENST00000590431 ZFYVE9O95405 1425 aa16.53■□□□□ 0.24
TM6SF2-204ENST00000590431 KCNA6P17658 529 aa16.53■□□□□ 0.24
TM6SF2-204ENST00000590431 CHD2O14647 1828 aaKnown RBP16.53■□□□□ 0.24
TM6SF2-204ENST00000590431 PROSER2Q86WR7 435 aaPredicted RBP16.52■□□□□ 0.24
TM6SF2-204ENST00000590431 SPHKAPQ2M3C7 1700 aa16.51■□□□□ 0.23
TM6SF2-204ENST00000590431 RRBP1Q9P2E9 1410 aaKnown RBP16.51■□□□□ 0.23
TM6SF2-204ENST00000590431 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
TM6SF2-204ENST00000590431 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
TM6SF2-204ENST00000590431 PLEKHG1Q9ULL1 1385 aa16.5■□□□□ 0.23
TM6SF2-204ENST00000590431 HDGFP51858 240 aaKnown RBP16.49■□□□□ 0.23
TM6SF2-204ENST00000590431 NWD1Q149M9 1564 aa16.48■□□□□ 0.23
TM6SF2-204ENST00000590431 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.46■□□□□ 0.23
TM6SF2-204ENST00000590431 NAIPQ13075 1403 aa16.45■□□□□ 0.22
TM6SF2-204ENST00000590431 SOCS7O14512 581 aa16.45■□□□□ 0.22
TM6SF2-204ENST00000590431 ROBO1Q9Y6N7 1651 aa16.44■□□□□ 0.22
TM6SF2-204ENST00000590431 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
TM6SF2-204ENST00000590431 TBX22Q9Y458 520 aa16.43■□□□□ 0.22
TM6SF2-204ENST00000590431 ADAMTS13Q76LX8 1427 aa16.43■□□□□ 0.22
TM6SF2-204ENST00000590431 KIF1BO60333 1816 aa16.42■□□□□ 0.22
TM6SF2-204ENST00000590431 CLTCL1P53675 1640 aa16.42■□□□□ 0.22
TM6SF2-204ENST00000590431 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
TM6SF2-204ENST00000590431 TRIM52Q96A61 297 aa16.42■□□□□ 0.22
TM6SF2-204ENST00000590431 MSH6P52701 1360 aa16.4■□□□□ 0.22
TM6SF2-204ENST00000590431 FAM135BQ49AJ0 1406 aa16.4■□□□□ 0.22
TM6SF2-204ENST00000590431 DIP2AQ14689 1571 aa16.39■□□□□ 0.21
TM6SF2-204ENST00000590431 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
TM6SF2-204ENST00000590431 NRXN3Q9Y4C0 1643 aa16.38■□□□□ 0.21
TM6SF2-204ENST00000590431 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.38■□□□□ 0.21
TM6SF2-204ENST00000590431 TRPM2O94759 1503 aa16.37■□□□□ 0.21
TM6SF2-204ENST00000590431 C14orf37Q86TY3 774 aa16.37■□□□□ 0.21
TM6SF2-204ENST00000590431 SLAIN2Q9P270 581 aa16.37■□□□□ 0.21
TM6SF2-204ENST00000590431 HFM1A2PYH4 1435 aa16.36■□□□□ 0.21
TM6SF2-204ENST00000590431 PTPRUQ92729 1446 aa16.36■□□□□ 0.21
TM6SF2-204ENST00000590431 PHLPP1O60346 1717 aa16.36■□□□□ 0.21
TM6SF2-204ENST00000590431 AMOTL2Q9Y2J4 779 aa16.36■□□□□ 0.21
TM6SF2-204ENST00000590431 NEXMIFQ5QGS0 1516 aa16.35■□□□□ 0.21
TM6SF2-204ENST00000590431 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
TM6SF2-204ENST00000590431 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
TM6SF2-204ENST00000590431 SETBP1Q9Y6X0 1596 aa16.34■□□□□ 0.21
TM6SF2-204ENST00000590431 FOXD1Q16676 465 aa16.33■□□□□ 0.2
TM6SF2-204ENST00000590431 XRN1Q8IZH2 1706 aaKnown RBP16.31■□□□□ 0.2
TM6SF2-204ENST00000590431 METP08581 1390 aa16.31■□□□□ 0.2
TM6SF2-204ENST00000590431 NCOA3Q9Y6Q9 1424 aa16.3■□□□□ 0.2
TM6SF2-204ENST00000590431 ATF3P18847 181 aa16.3■□□□□ 0.2
TM6SF2-204ENST00000590431 C19orf44Q9H6X5 657 aa16.3■□□□□ 0.2
TM6SF2-204ENST00000590431 RGS17Q9UGC6 210 aaPredicted RBP16.29■□□□□ 0.2
TM6SF2-204ENST00000590431 PPLO60437 1756 aa16.28■□□□□ 0.2
TM6SF2-204ENST00000590431 CADPS2Q86UW7 1296 aa16.28■□□□□ 0.2
TM6SF2-204ENST00000590431 SETD1AO15047 1707 aaKnown RBP16.26■□□□□ 0.19
TM6SF2-204ENST00000590431 COL16A1Q07092 1604 aaPredicted RBP16.26■□□□□ 0.19
TM6SF2-204ENST00000590431 NALCNQ8IZF0 1738 aa16.25■□□□□ 0.19
TM6SF2-204ENST00000590431 VGFO15240 615 aaPredicted RBP16.24■□□□□ 0.19
TM6SF2-204ENST00000590431 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
TM6SF2-204ENST00000590431 BRINP3Q76B58 766 aa16.22■□□□□ 0.19
TM6SF2-204ENST00000590431 JCADQ9P266 1359 aa16.22■□□□□ 0.19
TM6SF2-204ENST00000590431 AHDC1Q5TGY3 1603 aaPredicted RBP16.21■□□□□ 0.19
TM6SF2-204ENST00000590431 RGL3Q3MIN7 710 aa16.21■□□□□ 0.19
TM6SF2-204ENST00000590431 RPGRIP1LQ68CZ1 1315 aa16.2■□□□□ 0.18
TM6SF2-204ENST00000590431 POTEAQ6S8J7 498 aa16.2■□□□□ 0.18
TM6SF2-204ENST00000590431 IFT172Q9UG01 1749 aa16.19■□□□□ 0.18
TM6SF2-204ENST00000590431 DCCP43146 1447 aa16.19■□□□□ 0.18
TM6SF2-204ENST00000590431 MST1RQ04912 1400 aa16.19■□□□□ 0.18
TM6SF2-204ENST00000590431 SHPRHQ149N8 1683 aa16.18■□□□□ 0.18
TM6SF2-204ENST00000590431 DDX17Q92841 729 aaKnown RBP16.18■□□□□ 0.18
TM6SF2-204ENST00000590431 ASXL1Q8IXJ9 1541 aa16.18■□□□□ 0.18
TM6SF2-204ENST00000590431 CCDC144AA2RUR9 1427 aa16.18■□□□□ 0.18
TM6SF2-204ENST00000590431 NHSL1Q5SYE7 1610 aa16.17■□□□□ 0.18
TM6SF2-204ENST00000590431 ADGRL3Q9HAR2 1447 aa16.17■□□□□ 0.18
TM6SF2-204ENST00000590431 ADGRF5Q8IZF2 1346 aa16.17■□□□□ 0.18
TM6SF2-204ENST00000590431 ROBO2Q9HCK4 1378 aa16.16■□□□□ 0.18
TM6SF2-204ENST00000590431 SETD5Q9C0A6 1442 aa16.16■□□□□ 0.18
TM6SF2-204ENST00000590431 LRP6O75581 1613 aa16.16■□□□□ 0.18
TM6SF2-204ENST00000590431 SPATA31E1Q6ZUB1 1445 aa16.14■□□□□ 0.17
TM6SF2-204ENST00000590431 NUTM2BA6NNL0 878 aaPredicted RBP16.14■□□□□ 0.17
TM6SF2-204ENST00000590431 NUTM2EB1AL46 878 aaPredicted RBP16.14■□□□□ 0.17
TM6SF2-204ENST00000590431 MEX3CQ5U5Q3 659 aaKnown RBP16.14■□□□□ 0.17
TM6SF2-204ENST00000590431 NUTM2AQ8IVF1 878 aaPredicted RBP16.14■□□□□ 0.17
TM6SF2-204ENST00000590431 PTCH1Q13635 1447 aa16.13■□□□□ 0.17
TM6SF2-204ENST00000590431 SPATA31A6Q5VVP1 1343 aa16.13■□□□□ 0.17
TM6SF2-204ENST00000590431 STK26Q9P289 416 aa16.12■□□□□ 0.17
TM6SF2-204ENST00000590431 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
TM6SF2-204ENST00000590431 TMEM132EQ6IEE7 984 aa16.11■□□□□ 0.17
TM6SF2-204ENST00000590431 RAB3GAP2Q9H2M9 1393 aa16.11■□□□□ 0.17
TM6SF2-204ENST00000590431 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
TM6SF2-204ENST00000590431 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
TM6SF2-204ENST00000590431 ANKRD30BQ9BXX2 1392 aa16.09■□□□□ 0.17
TM6SF2-204ENST00000590431 LRRC59Q96AG4 307 aaKnown RBP16.08■□□□□ 0.16
TM6SF2-204ENST00000590431 KNDC1Q76NI1 1749 aa16.06■□□□□ 0.16
TM6SF2-204ENST00000590431 PRAG1Q86YV5 1406 aa16.06■□□□□ 0.16
TM6SF2-204ENST00000590431 PIK3C2GO75747 1445 aa16.05■□□□□ 0.16
TM6SF2-204ENST00000590431 NUTM2FA1L443 756 aa16.05■□□□□ 0.16
TM6SF2-204ENST00000590431 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
TM6SF2-204ENST00000590431 LAMC1P11047 1609 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms