RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 FRAT2O75474 233 aaPredicted RBP19.04■□□□□ 0.64
LRP3-203ENST00000590278 RRP7AQ9Y3A4 280 aaKnown RBP19.04■□□□□ 0.64
LRP3-203ENST00000590278 COG6Q9Y2V7 657 aa19.03■□□□□ 0.64
LRP3-203ENST00000590278 AFAP1Q8N556 730 aa19.03■□□□□ 0.64
LRP3-203ENST00000590278 ARHGEF5Q12774 1597 aa19.03■□□□□ 0.64
LRP3-203ENST00000590278 SENP3Q9H4L4 574 aaPredicted RBP19.02■□□□□ 0.64
LRP3-203ENST00000590278 PANK1Q8TE04 598 aa19.02■□□□□ 0.64
LRP3-203ENST00000590278 DMRT2Q9Y5R5 561 aa19.02■□□□□ 0.64
LRP3-203ENST00000590278 ARXQ96QS3 562 aa19.01■□□□□ 0.63
LRP3-203ENST00000590278 PRDM15P57071 1507 aaPredicted RBP19.01■□□□□ 0.63
LRP3-203ENST00000590278 BCL2L13Q9BXK5 485 aa19.01■□□□□ 0.63
LRP3-203ENST00000590278 CFAP70Q5T0N1 1121 aa19■□□□□ 0.63
LRP3-203ENST00000590278 EFCAB2Q5VUJ9 269 aa19■□□□□ 0.63
LRP3-203ENST00000590278 SLKQ9H2G2 1235 aaPredicted RBP19■□□□□ 0.63
LRP3-203ENST00000590278 IGHDP01880 384 aa18.99■□□□□ 0.63
LRP3-203ENST00000590278 CDC42BPBQ9Y5S2 1711 aa18.98■□□□□ 0.63
LRP3-203ENST00000590278 SPAG9O60271 1321 aaKnown RBP18.98■□□□□ 0.63
LRP3-203ENST00000590278 WDR7Q9Y4E6 1490 aa18.98■□□□□ 0.63
LRP3-203ENST00000590278 CLUAP1Q96AJ1 413 aa18.97■□□□□ 0.63
LRP3-203ENST00000590278 E9PSI1 815 aa18.96■□□□□ 0.63
LRP3-203ENST00000590278 ZNF521Q96K83 1311 aa18.96■□□□□ 0.63
LRP3-203ENST00000590278 CENPJQ9HC77 1338 aaPredicted RBP18.96■□□□□ 0.63
LRP3-203ENST00000590278 KIF3BO15066 747 aa18.96■□□□□ 0.63
LRP3-203ENST00000590278 TTC37Q6PGP7 1564 aa18.94■□□□□ 0.62
LRP3-203ENST00000590278 EIF5BO60841 1220 aaKnown RBP18.94■□□□□ 0.62
LRP3-203ENST00000590278 SPRYD3Q8NCJ5 442 aa18.94■□□□□ 0.62
LRP3-203ENST00000590278 PREX2Q70Z35 1606 aa18.93■□□□□ 0.62
LRP3-203ENST00000590278 EIF2AK4Q9P2K8 1649 aaKnown RBP18.93■□□□□ 0.62
LRP3-203ENST00000590278 SEC24BO95487 1268 aa18.92■□□□□ 0.62
LRP3-203ENST00000590278 PRKCSHP14314 528 aaPredicted RBP18.92■□□□□ 0.62
LRP3-203ENST00000590278 MYO5CQ9NQX4 1742 aa18.91■□□□□ 0.62
LRP3-203ENST00000590278 NKTRP30414 1462 aaKnown RBP18.91■□□□□ 0.62
LRP3-203ENST00000590278 INSRP06213 1382 aa18.91■□□□□ 0.62
LRP3-203ENST00000590278 MORC1Q86VD1 984 aa18.91■□□□□ 0.62
LRP3-203ENST00000590278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.91■□□□□ 0.62
LRP3-203ENST00000590278 EIF3AQ14152 1382 aaKnown RBP18.9■□□□□ 0.62
LRP3-203ENST00000590278 CARD14Q9BXL6 1004 aa18.9■□□□□ 0.62
LRP3-203ENST00000590278 TRAK1Q9UPV9 953 aa18.9■□□□□ 0.62
LRP3-203ENST00000590278 ASXL1Q8IXJ9 1541 aa18.9■□□□□ 0.62
LRP3-203ENST00000590278 TRAPPC8Q9Y2L5 1435 aa18.9■□□□□ 0.62
LRP3-203ENST00000590278 SCAF11Q99590 1463 aaKnown RBP18.9■□□□□ 0.62
LRP3-203ENST00000590278 TNNQ9UQP3 1299 aa18.89■□□□□ 0.62
LRP3-203ENST00000590278 DUOX2Q9NRD8 1548 aa18.88■□□□□ 0.61
LRP3-203ENST00000590278 WWC1Q8IX03 1113 aa18.88■□□□□ 0.61
LRP3-203ENST00000590278 CGNL1Q0VF96 1302 aa18.88■□□□□ 0.61
LRP3-203ENST00000590278 ADGRF5Q8IZF2 1346 aa18.88■□□□□ 0.61
LRP3-203ENST00000590278 UNC13BO14795 1591 aa18.87■□□□□ 0.61
LRP3-203ENST00000590278 BECN1Q14457 450 aa18.86■□□□□ 0.61
LRP3-203ENST00000590278 UPF2Q9HAU5 1272 aaKnown RBP18.86■□□□□ 0.61
LRP3-203ENST00000590278 MAST1Q9Y2H9 1570 aa18.85■□□□□ 0.61
LRP3-203ENST00000590278 SLC12A5Q9H2X9 1139 aa18.85■□□□□ 0.61
LRP3-203ENST00000590278 IQGAP3Q86VI3 1631 aa18.85■□□□□ 0.61
LRP3-203ENST00000590278 NUTM2DQ5VT03 806 aaPredicted RBP18.85■□□□□ 0.61
LRP3-203ENST00000590278 PIK3C2GO75747 1445 aa18.84■□□□□ 0.61
LRP3-203ENST00000590278 TRMT2AQ8IZ69 625 aaKnown RBP18.84■□□□□ 0.61
LRP3-203ENST00000590278 TCP11L2Q8N4U5 519 aa18.84■□□□□ 0.61
LRP3-203ENST00000590278 KANK1Q14678 1352 aa18.83■□□□□ 0.61
LRP3-203ENST00000590278 POGKQ9P215 609 aa18.83■□□□□ 0.61
LRP3-203ENST00000590278 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.6
LRP3-203ENST00000590278 TMEM132EQ6IEE7 984 aa18.82■□□□□ 0.6
LRP3-203ENST00000590278 PDE3AQ14432 1141 aa18.82■□□□□ 0.6
LRP3-203ENST00000590278 MAPK8IP3Q9UPT6 1336 aa18.81■□□□□ 0.6
LRP3-203ENST00000590278 LAMC1P11047 1609 aa18.81■□□□□ 0.6
LRP3-203ENST00000590278 RLBP1P12271 317 aa18.81■□□□□ 0.6
LRP3-203ENST00000590278 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
LRP3-203ENST00000590278 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
LRP3-203ENST00000590278 FTSJ3Q8IY81 847 aaKnown RBP18.8■□□□□ 0.6
LRP3-203ENST00000590278 PCDHB15Q9Y5E8 787 aa18.8■□□□□ 0.6
LRP3-203ENST00000590278 MTHFSP49914 203 aa18.79■□□□□ 0.6
LRP3-203ENST00000590278 ATP10AO60312 1499 aa18.79■□□□□ 0.6
LRP3-203ENST00000590278 PLCH2O75038 1416 aa18.79■□□□□ 0.6
LRP3-203ENST00000590278 RARSP54136 660 aaKnown RBP18.78■□□□□ 0.6
LRP3-203ENST00000590278 PDZRN3Q9UPQ7 1066 aa18.78■□□□□ 0.6
LRP3-203ENST00000590278 GZF1Q9H116 711 aaPredicted RBP18.78■□□□□ 0.6
LRP3-203ENST00000590278 ERCC6L2Q5T890 1561 aa18.77■□□□□ 0.6
LRP3-203ENST00000590278 RUNDC1Q96C34 613 aa18.77■□□□□ 0.6
LRP3-203ENST00000590278 USP19O94966 1318 aa18.77■□□□□ 0.6
LRP3-203ENST00000590278 MADDQ8WXG6 1647 aa18.77■□□□□ 0.6
LRP3-203ENST00000590278 PMFBP1Q8TBY8 1022 aa18.77■□□□□ 0.6
LRP3-203ENST00000590278 U2SURPO15042 1029 aaKnown RBP18.76■□□□□ 0.59
LRP3-203ENST00000590278 SYNMO15061 1565 aa18.76■□□□□ 0.59
LRP3-203ENST00000590278 NSD3Q9BZ95 1437 aa18.76■□□□□ 0.59
LRP3-203ENST00000590278 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
LRP3-203ENST00000590278 PLXNC1O60486 1568 aa18.76■□□□□ 0.59
LRP3-203ENST00000590278 SCAPERQ9BY12 1400 aa18.75■□□□□ 0.59
LRP3-203ENST00000590278 GGT6Q6P531 493 aa18.75■□□□□ 0.59
LRP3-203ENST00000590278 MFAP1P55081 439 aaKnown RBP18.75■□□□□ 0.59
LRP3-203ENST00000590278 TSR2Q969E8 191 aaKnown RBP18.75■□□□□ 0.59
LRP3-203ENST00000590278 UGGT1Q9NYU2 1555 aa18.75■□□□□ 0.59
LRP3-203ENST00000590278 RNF17Q9BXT8 1623 aaKnown RBP18.73■□□□□ 0.59
LRP3-203ENST00000590278 STAC3Q96MF2 364 aa18.73■□□□□ 0.59
LRP3-203ENST00000590278 RWDD1Q9H446 243 aaPredicted RBP18.73■□□□□ 0.59
LRP3-203ENST00000590278 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
LRP3-203ENST00000590278 NPC1L1Q9UHC9 1359 aa18.72■□□□□ 0.59
LRP3-203ENST00000590278 ERVK-7P63135 1459 aa18.72■□□□□ 0.59
LRP3-203ENST00000590278 ITPRIPQ8IWB1 547 aa18.71■□□□□ 0.59
LRP3-203ENST00000590278 SMC4Q9NTJ3 1288 aa18.71■□□□□ 0.59
LRP3-203ENST00000590278 CLTCL1P53675 1640 aa18.71■□□□□ 0.59
LRP3-203ENST00000590278 ABCC2Q92887 1545 aa18.71■□□□□ 0.59
LRP3-203ENST00000590278 IQGAP1P46940 1657 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms