RNA–Protein interactions for RNA: ENST00000590238.1

APBA3-206, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 5

Gene APBA3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-206ENST00000590238 RRBP1Q9P2E9 1410 aaKnown RBP24.41■■□□□ 1.5
APBA3-206ENST00000590238 KCNA6P17658 529 aa24.4■■□□□ 1.5
APBA3-206ENST00000590238 BCANQ96GW7 911 aa24.4■■□□□ 1.5
APBA3-206ENST00000590238 RBM33Q96EV2 1170 aaKnown RBP24.39■■□□□ 1.49
APBA3-206ENST00000590238 TMEM94Q12767 1356 aa24.39■■□□□ 1.49
APBA3-206ENST00000590238 TMEM131LA2VDJ0 1609 aa24.39■■□□□ 1.49
APBA3-206ENST00000590238 IQGAP3Q86VI3 1631 aa24.38■■□□□ 1.49
APBA3-206ENST00000590238 ZFYVE9O95405 1425 aa24.37■■□□□ 1.49
APBA3-206ENST00000590238 RIMS2Q9UQ26 1411 aa24.36■■□□□ 1.49
APBA3-206ENST00000590238 CHGAP10645 457 aaKnown RBP24.36■■□□□ 1.49
APBA3-206ENST00000590238 PROSER2Q86WR7 435 aaPredicted RBP24.36■■□□□ 1.49
APBA3-206ENST00000590238 NUP155O75694 1391 aa24.34■■□□□ 1.49
APBA3-206ENST00000590238 PPP1R15AO75807 674 aaPredicted RBP24.33■■□□□ 1.49
APBA3-206ENST00000590238 NWD1Q149M9 1564 aa24.33■■□□□ 1.48
APBA3-206ENST00000590238 PLEKHG1Q9ULL1 1385 aa24.32■■□□□ 1.48
APBA3-206ENST00000590238 NUTM2DQ5VT03 806 aaPredicted RBP24.31■■□□□ 1.48
APBA3-206ENST00000590238 CHD2O14647 1828 aaKnown RBP24.3■■□□□ 1.48
APBA3-206ENST00000590238 HDGFP51858 240 aaKnown RBP24.29■■□□□ 1.48
APBA3-206ENST00000590238 NKTRP30414 1462 aaKnown RBP24.29■■□□□ 1.48
APBA3-206ENST00000590238 FAM135BQ49AJ0 1406 aa24.27■■□□□ 1.48
APBA3-206ENST00000590238 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.25■■□□□ 1.47
APBA3-206ENST00000590238 PHF23Q9BUL5 403 aaPredicted RBP24.25■■□□□ 1.47
APBA3-206ENST00000590238 TBX22Q9Y458 520 aa24.24■■□□□ 1.47
APBA3-206ENST00000590238 ROBO1Q9Y6N7 1651 aa24.24■■□□□ 1.47
APBA3-206ENST00000590238 ADAMTS13Q76LX8 1427 aa24.22■■□□□ 1.47
APBA3-206ENST00000590238 MSH6P52701 1360 aa24.21■■□□□ 1.47
APBA3-206ENST00000590238 SPHKAPQ2M3C7 1700 aa24.2■■□□□ 1.46
APBA3-206ENST00000590238 NAIPQ13075 1403 aa24.17■■□□□ 1.46
APBA3-206ENST00000590238 SLAIN2Q9P270 581 aa24.16■■□□□ 1.46
APBA3-206ENST00000590238 DIP2AQ14689 1571 aa24.16■■□□□ 1.46
APBA3-206ENST00000590238 TRIM52Q96A61 297 aa24.13■■□□□ 1.45
APBA3-206ENST00000590238 RGS17Q9UGC6 210 aaPredicted RBP24.13■■□□□ 1.45
APBA3-206ENST00000590238 HFM1A2PYH4 1435 aa24.12■■□□□ 1.45
APBA3-206ENST00000590238 C14orf37Q86TY3 774 aa24.12■■□□□ 1.45
APBA3-206ENST00000590238 PTPRUQ92729 1446 aa24.11■■□□□ 1.45
APBA3-206ENST00000590238 ZNF326Q5BKZ1 582 aaKnown RBP24.11■■□□□ 1.45
APBA3-206ENST00000590238 PIK3R4Q99570 1358 aa24.11■■□□□ 1.45
APBA3-206ENST00000590238 TRPM2O94759 1503 aa24.1■■□□□ 1.45
APBA3-206ENST00000590238 NRXN3Q9Y4C0 1643 aa24.1■■□□□ 1.45
APBA3-206ENST00000590238 AMOTL2Q9Y2J4 779 aa24.1■■□□□ 1.45
APBA3-206ENST00000590238 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
APBA3-206ENST00000590238 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.1■■□□□ 1.45
APBA3-206ENST00000590238 CLTCL1P53675 1640 aa24.1■■□□□ 1.45
APBA3-206ENST00000590238 NCOA3Q9Y6Q9 1424 aa24.09■■□□□ 1.45
APBA3-206ENST00000590238 SETBP1Q9Y6X0 1596 aa24.06■■□□□ 1.44
APBA3-206ENST00000590238 C19orf44Q9H6X5 657 aa24.05■■□□□ 1.44
APBA3-206ENST00000590238 KIF1BO60333 1816 aa24.04■■□□□ 1.44
APBA3-206ENST00000590238 NEXMIFQ5QGS0 1516 aa24.03■■□□□ 1.44
APBA3-206ENST00000590238 XRN1Q8IZH2 1706 aaKnown RBP24.02■■□□□ 1.44
APBA3-206ENST00000590238 ATF3P18847 181 aa24.02■■□□□ 1.44
APBA3-206ENST00000590238 CADPS2Q86UW7 1296 aa24.02■■□□□ 1.44
APBA3-206ENST00000590238 METP08581 1390 aa24.02■■□□□ 1.44
APBA3-206ENST00000590238 COL16A1Q07092 1604 aaPredicted RBP24.01■■□□□ 1.43
APBA3-206ENST00000590238 POTEAQ6S8J7 498 aa23.99■■□□□ 1.43
APBA3-206ENST00000590238 JCADQ9P266 1359 aa23.99■■□□□ 1.43
APBA3-206ENST00000590238 SLC4A1APQ9BWU0 796 aaKnown RBP23.98■■□□□ 1.43
APBA3-206ENST00000590238 AHDC1Q5TGY3 1603 aaPredicted RBP23.94■■□□□ 1.42
APBA3-206ENST00000590238 BRINP3Q76B58 766 aa23.93■■□□□ 1.42
APBA3-206ENST00000590238 SETD5Q9C0A6 1442 aa23.92■■□□□ 1.42
APBA3-206ENST00000590238 FOXD1Q16676 465 aa23.91■■□□□ 1.42
APBA3-206ENST00000590238 DCCP43146 1447 aa23.91■■□□□ 1.42
APBA3-206ENST00000590238 LRP6O75581 1613 aa23.89■■□□□ 1.42
APBA3-206ENST00000590238 MST1RQ04912 1400 aa23.89■■□□□ 1.41
APBA3-206ENST00000590238 SETD1AO15047 1707 aaKnown RBP23.89■■□□□ 1.41
APBA3-206ENST00000590238 NALCNQ8IZF0 1738 aa23.88■■□□□ 1.41
APBA3-206ENST00000590238 SHPRHQ149N8 1683 aa23.87■■□□□ 1.41
APBA3-206ENST00000590238 VGFO15240 615 aaPredicted RBP23.87■■□□□ 1.41
APBA3-206ENST00000590238 ASXL1Q8IXJ9 1541 aa23.87■■□□□ 1.41
APBA3-206ENST00000590238 ADGRL3Q9HAR2 1447 aa23.86■■□□□ 1.41
APBA3-206ENST00000590238 PPLO60437 1756 aa23.86■■□□□ 1.41
APBA3-206ENST00000590238 SPATA31A6Q5VVP1 1343 aa23.85■■□□□ 1.41
APBA3-206ENST00000590238 MPHOSPH9Q99550 1183 aa23.85■■□□□ 1.41
APBA3-206ENST00000590238 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
APBA3-206ENST00000590238 RAB3GAP2Q9H2M9 1393 aa23.83■■□□□ 1.41
APBA3-206ENST00000590238 NHSL1Q5SYE7 1610 aa23.83■■□□□ 1.41
APBA3-206ENST00000590238 MEX3CQ5U5Q3 659 aaKnown RBP23.82■■□□□ 1.4
APBA3-206ENST00000590238 DDX17Q92841 729 aaKnown RBP23.82■■□□□ 1.4
APBA3-206ENST00000590238 ROBO2Q9HCK4 1378 aa23.81■■□□□ 1.4
APBA3-206ENST00000590238 ACIN1Q9UKV3 1341 aaKnown RBP23.81■■□□□ 1.4
APBA3-206ENST00000590238 PTCH1Q13635 1447 aa23.79■■□□□ 1.4
APBA3-206ENST00000590238 NUTM2BA6NNL0 878 aaPredicted RBP23.79■■□□□ 1.4
APBA3-206ENST00000590238 NUTM2EB1AL46 878 aaPredicted RBP23.79■■□□□ 1.4
APBA3-206ENST00000590238 NUTM2AQ8IVF1 878 aaPredicted RBP23.79■■□□□ 1.4
APBA3-206ENST00000590238 RGL3Q3MIN7 710 aa23.77■■□□□ 1.4
APBA3-206ENST00000590238 ADGRF5Q8IZF2 1346 aa23.76■■□□□ 1.39
APBA3-206ENST00000590238 CCDC144AA2RUR9 1427 aa23.76■■□□□ 1.39
APBA3-206ENST00000590238 C1orf167Q5SNV9 1468 aa23.75■■□□□ 1.39
APBA3-206ENST00000590238 LRRC59Q96AG4 307 aaKnown RBP23.74■■□□□ 1.39
APBA3-206ENST00000590238 SPATA31E1Q6ZUB1 1445 aa23.73■■□□□ 1.39
APBA3-206ENST00000590238 PRAG1Q86YV5 1406 aa23.73■■□□□ 1.39
APBA3-206ENST00000590238 ZNF772Q68DY9 489 aaPredicted RBP23.72■■□□□ 1.39
APBA3-206ENST00000590238 ORAI2Q96SN7 254 aa23.72■■□□□ 1.39
APBA3-206ENST00000590238 IFT172Q9UG01 1749 aa23.72■■□□□ 1.39
APBA3-206ENST00000590238 PNPLA6Q8IY17 1366 aa23.69■■□□□ 1.38
APBA3-206ENST00000590238 STK26Q9P289 416 aa23.68■■□□□ 1.38
APBA3-206ENST00000590238 LAMC1P11047 1609 aa23.66■■□□□ 1.38
APBA3-206ENST00000590238 AFF2P51816 1311 aa23.66■■□□□ 1.38
APBA3-206ENST00000590238 ANKRD30BQ9BXX2 1392 aa23.65■■□□□ 1.38
APBA3-206ENST00000590238 TMEM132EQ6IEE7 984 aa23.65■■□□□ 1.38
APBA3-206ENST00000590238 HRCP23327 699 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms