RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 CALD1Q05682 793 aaKnown RBP20.26■□□□□ 0.83
APBA3-205ENST00000590064 KANK1Q14678 1352 aa20.26■□□□□ 0.83
APBA3-205ENST00000590064 LNPKQ9C0E8 428 aa20.26■□□□□ 0.83
APBA3-205ENST00000590064 SRPK2P78362 688 aaKnown RBP20.25■□□□□ 0.83
APBA3-205ENST00000590064 DISP3Q9P2K9 1392 aa20.25■□□□□ 0.83
APBA3-205ENST00000590064 RUNDC1Q96C34 613 aa20.25■□□□□ 0.83
APBA3-205ENST00000590064 CHMP4BQ9H444 224 aaKnown RBP20.25■□□□□ 0.83
APBA3-205ENST00000590064 KIF3BO15066 747 aa20.24■□□□□ 0.83
APBA3-205ENST00000590064 EFCAB2Q5VUJ9 269 aa20.24■□□□□ 0.83
APBA3-205ENST00000590064 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
APBA3-205ENST00000590064 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
APBA3-205ENST00000590064 PKNOX2Q96KN3 472 aa20.23■□□□□ 0.83
APBA3-205ENST00000590064 TBC1D2Q9BYX2 928 aa20.23■□□□□ 0.83
APBA3-205ENST00000590064 IQGAP2Q13576 1575 aa20.23■□□□□ 0.83
APBA3-205ENST00000590064 CTTNBP2Q8WZ74 1663 aa20.22■□□□□ 0.83
APBA3-205ENST00000590064 KDM6BO15054 1643 aa20.22■□□□□ 0.83
APBA3-205ENST00000590064 PLEKHH2Q8IVE3 1493 aa20.22■□□□□ 0.83
APBA3-205ENST00000590064 SKOR2Q2VWA4 1001 aaPredicted RBP20.21■□□□□ 0.83
APBA3-205ENST00000590064 DDX19BQ9UMR2 479 aa20.21■□□□□ 0.83
APBA3-205ENST00000590064 STK26Q9P289 416 aa20.2■□□□□ 0.82
APBA3-205ENST00000590064 PER1O15534 1290 aaPredicted RBP20.2■□□□□ 0.82
APBA3-205ENST00000590064 GRPEL1Q9HAV7 217 aa20.2■□□□□ 0.82
APBA3-205ENST00000590064 SEC24BO95487 1268 aa20.19■□□□□ 0.82
APBA3-205ENST00000590064 FOXD4L5Q5VV16 416 aaPredicted RBP20.19■□□□□ 0.82
APBA3-205ENST00000590064 FOXD4L4Q8WXT5 416 aaPredicted RBP20.19■□□□□ 0.82
APBA3-205ENST00000590064 SPAG9O60271 1321 aaKnown RBP20.19■□□□□ 0.82
APBA3-205ENST00000590064 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
APBA3-205ENST00000590064 PLEKHH1Q9ULM0 1364 aa20.18■□□□□ 0.82
APBA3-205ENST00000590064 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
APBA3-205ENST00000590064 ESPNB1AK53 854 aa20.18■□□□□ 0.82
APBA3-205ENST00000590064 WWC1Q8IX03 1113 aa20.18■□□□□ 0.82
APBA3-205ENST00000590064 PZPP20742 1482 aa20.17■□□□□ 0.82
APBA3-205ENST00000590064 KDM2BQ8NHM5 1336 aa20.17■□□□□ 0.82
APBA3-205ENST00000590064 CFAP70Q5T0N1 1121 aa20.17■□□□□ 0.82
APBA3-205ENST00000590064 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
APBA3-205ENST00000590064 PANK2Q9BZ23 570 aa20.17■□□□□ 0.82
APBA3-205ENST00000590064 AAMPQ13685 434 aa20.17■□□□□ 0.82
APBA3-205ENST00000590064 NKTRP30414 1462 aaKnown RBP20.17■□□□□ 0.82
APBA3-205ENST00000590064 MTHFSP49914 203 aa20.16■□□□□ 0.82
APBA3-205ENST00000590064 FAM13BQ9NYF5 915 aa20.16■□□□□ 0.82
APBA3-205ENST00000590064 MAGI3Q5TCQ9 1506 aa20.16■□□□□ 0.82
APBA3-205ENST00000590064 TSR2Q969E8 191 aaKnown RBP20.15■□□□□ 0.82
APBA3-205ENST00000590064 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.81
APBA3-205ENST00000590064 XRCC6P12956 609 aaKnown RBP eCLIP20.14■□□□□ 0.81
APBA3-205ENST00000590064 NASPP49321 788 aaPredicted RBP20.13■□□□□ 0.81
APBA3-205ENST00000590064 GGT6Q6P531 493 aa20.13■□□□□ 0.81
APBA3-205ENST00000590064 KDM5BQ9UGL1 1544 aa20.13■□□□□ 0.81
APBA3-205ENST00000590064 PLB1Q6P1J6 1458 aa20.12■□□□□ 0.81
APBA3-205ENST00000590064 PTPRGP23470 1445 aa20.12■□□□□ 0.81
APBA3-205ENST00000590064 RRAGDQ9NQL2 400 aaPredicted RBP20.12■□□□□ 0.81
APBA3-205ENST00000590064 TBC1D32Q96NH3 1257 aa20.11■□□□□ 0.81
APBA3-205ENST00000590064 RARSP54136 660 aaKnown RBP20.11■□□□□ 0.81
APBA3-205ENST00000590064 EXOSC9Q06265 439 aaKnown RBP20.11■□□□□ 0.81
APBA3-205ENST00000590064 NOL8Q76FK4 1167 aaKnown RBP20.11■□□□□ 0.81
APBA3-205ENST00000590064 TESK2Q96S53 571 aa20.11■□□□□ 0.81
APBA3-205ENST00000590064 GCC2Q8IWJ2 1684 aa20.11■□□□□ 0.81
APBA3-205ENST00000590064 SPINK5Q9NQ38 1064 aaPredicted RBP20.1■□□□□ 0.81
APBA3-205ENST00000590064 NINLQ9Y2I6 1382 aa20.1■□□□□ 0.81
APBA3-205ENST00000590064 MVPQ14764 893 aaKnown RBP20.1■□□□□ 0.81
APBA3-205ENST00000590064 MCTP1Q6DN14 999 aa20.09■□□□□ 0.81
APBA3-205ENST00000590064 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
APBA3-205ENST00000590064 SLC12A5Q9H2X9 1139 aa20.08■□□□□ 0.81
APBA3-205ENST00000590064 PCDHB15Q9Y5E8 787 aa20.08■□□□□ 0.81
APBA3-205ENST00000590064 GPATCH8Q9UKJ3 1502 aaKnown RBP20.08■□□□□ 0.81
APBA3-205ENST00000590064 R3HCC1Q9Y3T6 440 aaKnown RBP20.08■□□□□ 0.8
APBA3-205ENST00000590064 RRP9O43818 475 aaKnown RBP20.07■□□□□ 0.8
APBA3-205ENST00000590064 FOXD4L6Q3SYB3 417 aaPredicted RBP20.07■□□□□ 0.8
APBA3-205ENST00000590064 FOXD4L3Q6VB84 417 aaPredicted RBP20.07■□□□□ 0.8
APBA3-205ENST00000590064 RIPK4P57078 832 aa20.07■□□□□ 0.8
APBA3-205ENST00000590064 DENND4BO75064 1496 aaPredicted RBP20.07■□□□□ 0.8
APBA3-205ENST00000590064 AMER1Q5JTC6 1135 aaPredicted RBP20.07■□□□□ 0.8
APBA3-205ENST00000590064 RBM10P98175 930 aaKnown RBP20.06■□□□□ 0.8
APBA3-205ENST00000590064 CFAP44Q96MT7 982 aa20.06■□□□□ 0.8
APBA3-205ENST00000590064 KIAA0586Q9BVV6 1533 aa20.06■□□□□ 0.8
APBA3-205ENST00000590064 TNNQ9UQP3 1299 aa20.05■□□□□ 0.8
APBA3-205ENST00000590064 NPM1P06748 294 aaKnown RBP eCLIP20.05■□□□□ 0.8
APBA3-205ENST00000590064 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.05■□□□□ 0.8
APBA3-205ENST00000590064 ST18O60284 1047 aa20.05■□□□□ 0.8
APBA3-205ENST00000590064 KIAA2012Q0VF49 1180 aa20.05■□□□□ 0.8
APBA3-205ENST00000590064 CAVIN1Q6NZI2 390 aaKnown RBP20.04■□□□□ 0.8
APBA3-205ENST00000590064 KIAA1211Q6ZU35 1233 aa20.04■□□□□ 0.8
APBA3-205ENST00000590064 PRAG1Q86YV5 1406 aa20.04■□□□□ 0.8
APBA3-205ENST00000590064 TMEM132EQ6IEE7 984 aa20.03■□□□□ 0.8
APBA3-205ENST00000590064 KIF14Q15058 1648 aa20.03■□□□□ 0.8
APBA3-205ENST00000590064 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.8
APBA3-205ENST00000590064 WDR63Q8IWG1 891 aa20.02■□□□□ 0.8
APBA3-205ENST00000590064 C1orf115Q9H7X2 142 aa20.02■□□□□ 0.8
APBA3-205ENST00000590064 NOB1Q9ULX3 412 aaKnown RBP20.02■□□□□ 0.8
APBA3-205ENST00000590064 KIF16BQ96L93 1317 aa20.02■□□□□ 0.8
APBA3-205ENST00000590064 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.8
APBA3-205ENST00000590064 NUP153P49790 1475 aaKnown RBP20.02■□□□□ 0.8
APBA3-205ENST00000590064 TPM2P07951 284 aa20.02■□□□□ 0.8
APBA3-205ENST00000590064 CLCN1P35523 988 aa20.02■□□□□ 0.79
APBA3-205ENST00000590064 HDGFL2Q7Z4V5 671 aaPredicted RBP20.02■□□□□ 0.79
APBA3-205ENST00000590064 DNAJC5BQ9UF47 199 aa20.02■□□□□ 0.79
APBA3-205ENST00000590064 DNMT1P26358 1616 aaKnown RBP20.01■□□□□ 0.79
APBA3-205ENST00000590064 GGNBP2Q9H3C7 697 aa20.01■□□□□ 0.79
APBA3-205ENST00000590064 MCCP23508 829 aa20.01■□□□□ 0.79
APBA3-205ENST00000590064 ATF7IPQ6VMQ6 1270 aa20■□□□□ 0.79
APBA3-205ENST00000590064 CCDC173Q0VFZ6 552 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms