RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 IQGAP3Q86VI3 1631 aa27.63■■■□□ 2.01
H3F3B-209ENST00000589949 NUP155O75694 1391 aa27.6■■■□□ 2.01
H3F3B-209ENST00000589949 KCNA6P17658 529 aa27.59■■■□□ 2.01
H3F3B-209ENST00000589949 RBM33Q96EV2 1170 aaKnown RBP27.59■■■□□ 2.01
H3F3B-209ENST00000589949 RIMS2Q9UQ26 1411 aa27.58■■■□□ 2
H3F3B-209ENST00000589949 TMEM94Q12767 1356 aa27.57■■■□□ 2
H3F3B-209ENST00000589949 MED1Q15648 1581 aaPredicted RBP27.55■■■□□ 2
H3F3B-209ENST00000589949 PLEKHG1Q9ULL1 1385 aa27.54■■■□□ 2
H3F3B-209ENST00000589949 RRBP1Q9P2E9 1410 aaKnown RBP27.53■■■□□ 2
H3F3B-209ENST00000589949 SOCS7O14512 581 aa27.53■■■□□ 2
H3F3B-209ENST00000589949 CHGAP10645 457 aaKnown RBP27.53■■■□□ 2
H3F3B-209ENST00000589949 NWD1Q149M9 1564 aa27.52■■■□□ 2
H3F3B-209ENST00000589949 NUTM2DQ5VT03 806 aaPredicted RBP27.52■■■□□ 2
H3F3B-209ENST00000589949 BCANQ96GW7 911 aa27.52■■■□□ 2
H3F3B-209ENST00000589949 PROSER2Q86WR7 435 aaPredicted RBP27.51■■□□□ 1.99
H3F3B-209ENST00000589949 PPP1R15AO75807 674 aaPredicted RBP27.48■■□□□ 1.99
H3F3B-209ENST00000589949 NKTRP30414 1462 aaKnown RBP27.47■■□□□ 1.99
H3F3B-209ENST00000589949 ADAMTS13Q76LX8 1427 aa27.46■■□□□ 1.99
H3F3B-209ENST00000589949 NAIPQ13075 1403 aa27.44■■□□□ 1.98
H3F3B-209ENST00000589949 HDGFP51858 240 aaKnown RBP27.44■■□□□ 1.98
H3F3B-209ENST00000589949 TBX22Q9Y458 520 aa27.44■■□□□ 1.98
H3F3B-209ENST00000589949 CHD2O14647 1828 aaKnown RBP27.44■■□□□ 1.98
H3F3B-209ENST00000589949 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.43■■□□□ 1.98
H3F3B-209ENST00000589949 FAM135BQ49AJ0 1406 aa27.42■■□□□ 1.98
H3F3B-209ENST00000589949 SPHKAPQ2M3C7 1700 aa27.38■■□□□ 1.97
H3F3B-209ENST00000589949 ROBO1Q9Y6N7 1651 aa27.36■■□□□ 1.97
H3F3B-209ENST00000589949 MSH6P52701 1360 aa27.34■■□□□ 1.97
H3F3B-209ENST00000589949 PTPRUQ92729 1446 aa27.33■■□□□ 1.97
H3F3B-209ENST00000589949 DIP2AQ14689 1571 aa27.32■■□□□ 1.96
H3F3B-209ENST00000589949 CLTCL1P53675 1640 aa27.31■■□□□ 1.96
H3F3B-209ENST00000589949 NRXN3Q9Y4C0 1643 aa27.31■■□□□ 1.96
H3F3B-209ENST00000589949 SLAIN2Q9P270 581 aa27.31■■□□□ 1.96
H3F3B-209ENST00000589949 HFM1A2PYH4 1435 aa27.3■■□□□ 1.96
H3F3B-209ENST00000589949 PIK3R4Q99570 1358 aa27.29■■□□□ 1.96
H3F3B-209ENST00000589949 TRPM2O94759 1503 aa27.27■■□□□ 1.96
H3F3B-209ENST00000589949 PHF23Q9BUL5 403 aaPredicted RBP27.27■■□□□ 1.96
H3F3B-209ENST00000589949 AMOTL2Q9Y2J4 779 aa27.27■■□□□ 1.96
H3F3B-209ENST00000589949 ZNF326Q5BKZ1 582 aaKnown RBP27.26■■□□□ 1.95
H3F3B-209ENST00000589949 RGS17Q9UGC6 210 aaPredicted RBP27.26■■□□□ 1.95
H3F3B-209ENST00000589949 SETBP1Q9Y6X0 1596 aa27.26■■□□□ 1.95
H3F3B-209ENST00000589949 NCOA3Q9Y6Q9 1424 aa27.25■■□□□ 1.95
H3F3B-209ENST00000589949 NEXMIFQ5QGS0 1516 aa27.23■■□□□ 1.95
H3F3B-209ENST00000589949 TRIM52Q96A61 297 aa27.23■■□□□ 1.95
H3F3B-209ENST00000589949 METP08581 1390 aa27.22■■□□□ 1.95
H3F3B-209ENST00000589949 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.21■■□□□ 1.95
H3F3B-209ENST00000589949 C14orf37Q86TY3 774 aa27.21■■□□□ 1.95
H3F3B-209ENST00000589949 XRN1Q8IZH2 1706 aaKnown RBP27.2■■□□□ 1.94
H3F3B-209ENST00000589949 C19orf44Q9H6X5 657 aa27.19■■□□□ 1.94
H3F3B-209ENST00000589949 PHLPP1O60346 1717 aa27.16■■□□□ 1.94
H3F3B-209ENST00000589949 SLC4A1APQ9BWU0 796 aaKnown RBP27.16■■□□□ 1.94
H3F3B-209ENST00000589949 KIF1BO60333 1816 aa27.14■■□□□ 1.94
H3F3B-209ENST00000589949 FOXD1Q16676 465 aa27.14■■□□□ 1.94
H3F3B-209ENST00000589949 CADPS2Q86UW7 1296 aa27.14■■□□□ 1.94
H3F3B-209ENST00000589949 COL16A1Q07092 1604 aaPredicted RBP27.13■■□□□ 1.93
H3F3B-209ENST00000589949 ATF3P18847 181 aa27.13■■□□□ 1.93
H3F3B-209ENST00000589949 JCADQ9P266 1359 aa27.08■■□□□ 1.93
H3F3B-209ENST00000589949 POTEAQ6S8J7 498 aa27.07■■□□□ 1.92
H3F3B-209ENST00000589949 BRINP3Q76B58 766 aa27.07■■□□□ 1.92
H3F3B-209ENST00000589949 AHDC1Q5TGY3 1603 aaPredicted RBP27.06■■□□□ 1.92
H3F3B-209ENST00000589949 SETD1AO15047 1707 aaKnown RBP27.06■■□□□ 1.92
H3F3B-209ENST00000589949 DCCP43146 1447 aa27.06■■□□□ 1.92
H3F3B-209ENST00000589949 VGFO15240 615 aaPredicted RBP27.04■■□□□ 1.92
H3F3B-209ENST00000589949 MST1RQ04912 1400 aa27.04■■□□□ 1.92
H3F3B-209ENST00000589949 LRP6O75581 1613 aa27.01■■□□□ 1.92
H3F3B-209ENST00000589949 ADGRL3Q9HAR2 1447 aa27.01■■□□□ 1.91
H3F3B-209ENST00000589949 RPGRIP1LQ68CZ1 1315 aa27.01■■□□□ 1.91
H3F3B-209ENST00000589949 PPLO60437 1756 aa27.01■■□□□ 1.91
H3F3B-209ENST00000589949 NALCNQ8IZF0 1738 aa27.01■■□□□ 1.91
H3F3B-209ENST00000589949 ROBO2Q9HCK4 1378 aa27■■□□□ 1.91
H3F3B-209ENST00000589949 MPHOSPH9Q99550 1183 aa27■■□□□ 1.91
H3F3B-209ENST00000589949 ASXL1Q8IXJ9 1541 aa27■■□□□ 1.91
H3F3B-209ENST00000589949 SPATA31E1Q6ZUB1 1445 aa26.96■■□□□ 1.91
H3F3B-209ENST00000589949 ADGRF5Q8IZF2 1346 aa26.95■■□□□ 1.91
H3F3B-209ENST00000589949 DDX17Q92841 729 aaKnown RBP26.95■■□□□ 1.9
H3F3B-209ENST00000589949 PTCH1Q13635 1447 aa26.95■■□□□ 1.9
H3F3B-209ENST00000589949 SPATA31A6Q5VVP1 1343 aa26.93■■□□□ 1.9
H3F3B-209ENST00000589949 CCDC144AA2RUR9 1427 aa26.93■■□□□ 1.9
H3F3B-209ENST00000589949 PRAG1Q86YV5 1406 aa26.93■■□□□ 1.9
H3F3B-209ENST00000589949 SHPRHQ149N8 1683 aa26.93■■□□□ 1.9
H3F3B-209ENST00000589949 RGL3Q3MIN7 710 aa26.93■■□□□ 1.9
H3F3B-209ENST00000589949 NHSL1Q5SYE7 1610 aa26.91■■□□□ 1.9
H3F3B-209ENST00000589949 C1orf167Q5SNV9 1468 aa26.89■■□□□ 1.9
H3F3B-209ENST00000589949 SETD5Q9C0A6 1442 aa26.89■■□□□ 1.89
H3F3B-209ENST00000589949 IFT172Q9UG01 1749 aa26.86■■□□□ 1.89
H3F3B-209ENST00000589949 NUTM2BA6NNL0 878 aaPredicted RBP26.84■■□□□ 1.89
H3F3B-209ENST00000589949 NUTM2EB1AL46 878 aaPredicted RBP26.84■■□□□ 1.89
H3F3B-209ENST00000589949 NUTM2AQ8IVF1 878 aaPredicted RBP26.84■■□□□ 1.89
H3F3B-209ENST00000589949 ORAI2Q96SN7 254 aa26.84■■□□□ 1.89
H3F3B-209ENST00000589949 MEX3CQ5U5Q3 659 aaKnown RBP26.83■■□□□ 1.89
H3F3B-209ENST00000589949 ANKRD30BQ9BXX2 1392 aa26.82■■□□□ 1.88
H3F3B-209ENST00000589949 LRRC59Q96AG4 307 aaKnown RBP26.81■■□□□ 1.88
H3F3B-209ENST00000589949 RAB3GAP2Q9H2M9 1393 aa26.81■■□□□ 1.88
H3F3B-209ENST00000589949 TMEM132EQ6IEE7 984 aa26.8■■□□□ 1.88
H3F3B-209ENST00000589949 STK26Q9P289 416 aa26.8■■□□□ 1.88
H3F3B-209ENST00000589949 PNPLA6Q8IY17 1366 aa26.8■■□□□ 1.88
H3F3B-209ENST00000589949 PIK3C2GO75747 1445 aa26.8■■□□□ 1.88
H3F3B-209ENST00000589949 WAPLQ7Z5K2 1190 aa26.78■■□□□ 1.88
H3F3B-209ENST00000589949 LAMC1P11047 1609 aa26.78■■□□□ 1.88
H3F3B-209ENST00000589949 TECPR2O15040 1411 aa26.77■■□□□ 1.88
H3F3B-209ENST00000589949 LRPPRCP42704 1394 aaKnown RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms