RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 NUP155O75694 1391 aa19.41■□□□□ 0.7
RFX1-207ENST00000589937 ILDR2Q71H61 639 aa19.4■□□□□ 0.7
RFX1-207ENST00000589937 SLC26A8Q96RN1 970 aa19.4■□□□□ 0.7
RFX1-207ENST00000589937 RIMS2Q9UQ26 1411 aa19.4■□□□□ 0.7
RFX1-207ENST00000589937 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.7
RFX1-207ENST00000589937 TOM1O60784 492 aa19.39■□□□□ 0.69
RFX1-207ENST00000589937 SLC52A1Q9NWF4 448 aa19.39■□□□□ 0.69
RFX1-207ENST00000589937 MED1Q15648 1581 aaPredicted RBP19.39■□□□□ 0.69
RFX1-207ENST00000589937 CLTCL1P53675 1640 aa19.37■□□□□ 0.69
RFX1-207ENST00000589937 NAIPQ13075 1403 aa19.36■□□□□ 0.69
RFX1-207ENST00000589937 RBM33Q96EV2 1170 aaKnown RBP19.35■□□□□ 0.69
RFX1-207ENST00000589937 PLEKHG1Q9ULL1 1385 aa19.34■□□□□ 0.69
RFX1-207ENST00000589937 CHGAP10645 457 aaKnown RBP19.34■□□□□ 0.69
RFX1-207ENST00000589937 NUTM2DQ5VT03 806 aaPredicted RBP19.34■□□□□ 0.69
RFX1-207ENST00000589937 TMEM94Q12767 1356 aa19.33■□□□□ 0.69
RFX1-207ENST00000589937 NRXN3Q9Y4C0 1643 aa19.33■□□□□ 0.69
RFX1-207ENST00000589937 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
RFX1-207ENST00000589937 ROBO1Q9Y6N7 1651 aa19.31■□□□□ 0.68
RFX1-207ENST00000589937 PPP1R15AO75807 674 aaPredicted RBP19.3■□□□□ 0.68
RFX1-207ENST00000589937 BCANQ96GW7 911 aa19.3■□□□□ 0.68
RFX1-207ENST00000589937 ADAMTS13Q76LX8 1427 aa19.3■□□□□ 0.68
RFX1-207ENST00000589937 TRPM2O94759 1503 aa19.3■□□□□ 0.68
RFX1-207ENST00000589937 KIF1BO60333 1816 aa19.3■□□□□ 0.68
RFX1-207ENST00000589937 DIP2AQ14689 1571 aa19.29■□□□□ 0.68
RFX1-207ENST00000589937 KCNA6P17658 529 aa19.29■□□□□ 0.68
RFX1-207ENST00000589937 HFM1A2PYH4 1435 aa19.27■□□□□ 0.68
RFX1-207ENST00000589937 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
RFX1-207ENST00000589937 XRN1Q8IZH2 1706 aaKnown RBP19.25■□□□□ 0.67
RFX1-207ENST00000589937 PROSER2Q86WR7 435 aaPredicted RBP19.24■□□□□ 0.67
RFX1-207ENST00000589937 SETBP1Q9Y6X0 1596 aa19.23■□□□□ 0.67
RFX1-207ENST00000589937 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.22■□□□□ 0.67
RFX1-207ENST00000589937 PTPRUQ92729 1446 aa19.22■□□□□ 0.67
RFX1-207ENST00000589937 SETD1AO15047 1707 aaKnown RBP19.21■□□□□ 0.67
RFX1-207ENST00000589937 PHLPP1O60346 1717 aa19.2■□□□□ 0.66
RFX1-207ENST00000589937 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.19■□□□□ 0.66
RFX1-207ENST00000589937 PPLO60437 1756 aa19.19■□□□□ 0.66
RFX1-207ENST00000589937 MSH6P52701 1360 aa19.18■□□□□ 0.66
RFX1-207ENST00000589937 FAM135BQ49AJ0 1406 aa19.17■□□□□ 0.66
RFX1-207ENST00000589937 TBX22Q9Y458 520 aa19.17■□□□□ 0.66
RFX1-207ENST00000589937 TRIM52Q96A61 297 aa19.16■□□□□ 0.66
RFX1-207ENST00000589937 NALCNQ8IZF0 1738 aa19.16■□□□□ 0.66
RFX1-207ENST00000589937 HDGFP51858 240 aaKnown RBP19.15■□□□□ 0.66
RFX1-207ENST00000589937 ZNF326Q5BKZ1 582 aaKnown RBP19.15■□□□□ 0.66
RFX1-207ENST00000589937 COL16A1Q07092 1604 aaPredicted RBP19.14■□□□□ 0.65
RFX1-207ENST00000589937 METP08581 1390 aa19.12■□□□□ 0.65
RFX1-207ENST00000589937 PIK3R4Q99570 1358 aa19.12■□□□□ 0.65
RFX1-207ENST00000589937 SOCS7O14512 581 aa19.12■□□□□ 0.65
RFX1-207ENST00000589937 FOXD1Q16676 465 aa19.12■□□□□ 0.65
RFX1-207ENST00000589937 IFT172Q9UG01 1749 aa19.11■□□□□ 0.65
RFX1-207ENST00000589937 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
RFX1-207ENST00000589937 AMOTL2Q9Y2J4 779 aa19.09■□□□□ 0.65
RFX1-207ENST00000589937 C14orf37Q86TY3 774 aa19.08■□□□□ 0.64
RFX1-207ENST00000589937 SLAIN2Q9P270 581 aa19.07■□□□□ 0.64
RFX1-207ENST00000589937 NCOA3Q9Y6Q9 1424 aa19.07■□□□□ 0.64
RFX1-207ENST00000589937 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
RFX1-207ENST00000589937 AHDC1Q5TGY3 1603 aaPredicted RBP19.06■□□□□ 0.64
RFX1-207ENST00000589937 NHSL1Q5SYE7 1610 aa19.03■□□□□ 0.64
RFX1-207ENST00000589937 SHPRHQ149N8 1683 aa19.02■□□□□ 0.64
RFX1-207ENST00000589937 ASXL1Q8IXJ9 1541 aa19.02■□□□□ 0.64
RFX1-207ENST00000589937 RGS17Q9UGC6 210 aaPredicted RBP19.01■□□□□ 0.63
RFX1-207ENST00000589937 DCCP43146 1447 aa19■□□□□ 0.63
RFX1-207ENST00000589937 MST1RQ04912 1400 aa19■□□□□ 0.63
RFX1-207ENST00000589937 ADGRL3Q9HAR2 1447 aa19■□□□□ 0.63
RFX1-207ENST00000589937 LRP6O75581 1613 aa19■□□□□ 0.63
RFX1-207ENST00000589937 SPATA31E1Q6ZUB1 1445 aa19■□□□□ 0.63
RFX1-207ENST00000589937 C19orf44Q9H6X5 657 aa18.99■□□□□ 0.63
RFX1-207ENST00000589937 CCDC144AA2RUR9 1427 aa18.99■□□□□ 0.63
RFX1-207ENST00000589937 ROBO2Q9HCK4 1378 aa18.98■□□□□ 0.63
RFX1-207ENST00000589937 ATF3P18847 181 aa18.98■□□□□ 0.63
RFX1-207ENST00000589937 PTCH1Q13635 1447 aa18.98■□□□□ 0.63
RFX1-207ENST00000589937 CADPS2Q86UW7 1296 aa18.97■□□□□ 0.63
RFX1-207ENST00000589937 MPHOSPH9Q99550 1183 aa18.97■□□□□ 0.63
RFX1-207ENST00000589937 BRINP3Q76B58 766 aa18.96■□□□□ 0.63
RFX1-207ENST00000589937 SETD5Q9C0A6 1442 aa18.96■□□□□ 0.63
RFX1-207ENST00000589937 JCADQ9P266 1359 aa18.95■□□□□ 0.62
RFX1-207ENST00000589937 KNDC1Q76NI1 1749 aa18.94■□□□□ 0.62
RFX1-207ENST00000589937 ADGRF5Q8IZF2 1346 aa18.94■□□□□ 0.62
RFX1-207ENST00000589937 RAB3GAP2Q9H2M9 1393 aa18.93■□□□□ 0.62
RFX1-207ENST00000589937 PRAG1Q86YV5 1406 aa18.93■□□□□ 0.62
RFX1-207ENST00000589937 VGFO15240 615 aaPredicted RBP18.92■□□□□ 0.62
RFX1-207ENST00000589937 RGL3Q3MIN7 710 aa18.92■□□□□ 0.62
RFX1-207ENST00000589937 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
RFX1-207ENST00000589937 DDX17Q92841 729 aaKnown RBP18.91■□□□□ 0.62
RFX1-207ENST00000589937 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
RFX1-207ENST00000589937 LAMC1P11047 1609 aa18.89■□□□□ 0.62
RFX1-207ENST00000589937 PIK3C2GO75747 1445 aa18.89■□□□□ 0.61
RFX1-207ENST00000589937 C1orf167Q5SNV9 1468 aa18.89■□□□□ 0.61
RFX1-207ENST00000589937 CDC42BPGQ6DT37 1551 aa18.89■□□□□ 0.61
RFX1-207ENST00000589937 ANKRD30BQ9BXX2 1392 aa18.84■□□□□ 0.61
RFX1-207ENST00000589937 FMN2Q9NZ56 1722 aa18.84■□□□□ 0.61
RFX1-207ENST00000589937 NRXN1Q9ULB1 1477 aa18.84■□□□□ 0.61
RFX1-207ENST00000589937 TECPR2O15040 1411 aa18.83■□□□□ 0.61
RFX1-207ENST00000589937 RGPD8O14715 1765 aaPredicted RBP18.83■□□□□ 0.61
RFX1-207ENST00000589937 PLEKHH1Q9ULM0 1364 aa18.83■□□□□ 0.61
RFX1-207ENST00000589937 STK26Q9P289 416 aa18.83■□□□□ 0.6
RFX1-207ENST00000589937 MYOM2P54296 1465 aa18.83■□□□□ 0.6
RFX1-207ENST00000589937 SPATA31A6Q5VVP1 1343 aa18.82■□□□□ 0.6
RFX1-207ENST00000589937 TMEM132EQ6IEE7 984 aa18.82■□□□□ 0.6
RFX1-207ENST00000589937 LRPPRCP42704 1394 aaKnown RBP18.81■□□□□ 0.6
RFX1-207ENST00000589937 ORAI2Q96SN7 254 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms