RNA–Protein interactions for RNA: ENST00000589923.1

GRN-216, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 437 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-216ENST00000589923 GCC2Q8IWJ2 1684 aa17.17■□□□□ 0.34
GRN-216ENST00000589923 PROSER2Q86WR7 435 aaPredicted RBP17.16■□□□□ 0.34
GRN-216ENST00000589923 STAG3Q9UJ98 1225 aa17.16■□□□□ 0.34
GRN-216ENST00000589923 ADGRL2O95490 1459 aa17.16■□□□□ 0.34
GRN-216ENST00000589923 CHIC2Q9UKJ5 165 aa17.15■□□□□ 0.34
GRN-216ENST00000589923 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
GRN-216ENST00000589923 TMEM131LA2VDJ0 1609 aa17.14■□□□□ 0.33
GRN-216ENST00000589923 LRP6O75581 1613 aa17.14■□□□□ 0.33
GRN-216ENST00000589923 RPRD2Q5VT52 1461 aaKnown RBP17.12■□□□□ 0.33
GRN-216ENST00000589923 MSH6P52701 1360 aa17.12■□□□□ 0.33
GRN-216ENST00000589923 PLEKHG1Q9ULL1 1385 aa17.12■□□□□ 0.33
GRN-216ENST00000589923 SLAIN2Q9P270 581 aa17.1■□□□□ 0.33
GRN-216ENST00000589923 JCADQ9P266 1359 aa17.1■□□□□ 0.33
GRN-216ENST00000589923 RIMS2Q9UQ26 1411 aa17.1■□□□□ 0.33
GRN-216ENST00000589923 SLC52A1Q9NWF4 448 aa17.09■□□□□ 0.33
GRN-216ENST00000589923 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.32
GRN-216ENST00000589923 ADAMTS13Q76LX8 1427 aa17.08■□□□□ 0.32
GRN-216ENST00000589923 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
GRN-216ENST00000589923 UNC13BO14795 1591 aa17.07■□□□□ 0.32
GRN-216ENST00000589923 E9PCH4 1651 aa17.07■□□□□ 0.32
GRN-216ENST00000589923 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
GRN-216ENST00000589923 ANKRD50Q9ULJ7 1429 aa17.06■□□□□ 0.32
GRN-216ENST00000589923 SRCAPQ6ZRS2 3230 aa17.06■□□□□ 0.32
GRN-216ENST00000589923 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
GRN-216ENST00000589923 NCOA3Q9Y6Q9 1424 aa17.04■□□□□ 0.32
GRN-216ENST00000589923 BCANQ96GW7 911 aa17.02■□□□□ 0.32
GRN-216ENST00000589923 NRXN3Q9Y4C0 1643 aa17.01■□□□□ 0.31
GRN-216ENST00000589923 TBX22Q9Y458 520 aa17.01■□□□□ 0.31
GRN-216ENST00000589923 PTPRUQ92729 1446 aa17.01■□□□□ 0.31
GRN-216ENST00000589923 IQGAP3Q86VI3 1631 aa17■□□□□ 0.31
GRN-216ENST00000589923 XRN1Q8IZH2 1706 aaKnown RBP16.99■□□□□ 0.31
GRN-216ENST00000589923 PPP1R15AO75807 674 aaPredicted RBP16.99■□□□□ 0.31
GRN-216ENST00000589923 SPATA31A6Q5VVP1 1343 aa16.98■□□□□ 0.31
GRN-216ENST00000589923 NUTM2DQ5VT03 806 aaPredicted RBP16.98■□□□□ 0.31
GRN-216ENST00000589923 TRPM2O94759 1503 aa16.97■□□□□ 0.31
GRN-216ENST00000589923 UPF1Q92900 1129 aaKnown RBP eCLIP16.97■□□□□ 0.31
GRN-216ENST00000589923 NHSL1Q5SYE7 1610 aa16.96■□□□□ 0.31
GRN-216ENST00000589923 APLP2Q06481 763 aa16.96■□□□□ 0.31
GRN-216ENST00000589923 PIK3R4Q99570 1358 aa16.96■□□□□ 0.31
GRN-216ENST00000589923 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.3
GRN-216ENST00000589923 FAM50AQ14320 339 aaKnown RBP16.95■□□□□ 0.3
GRN-216ENST00000589923 BRINP3Q76B58 766 aa16.94■□□□□ 0.3
GRN-216ENST00000589923 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
GRN-216ENST00000589923 C19orf44Q9H6X5 657 aa16.94■□□□□ 0.3
GRN-216ENST00000589923 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
GRN-216ENST00000589923 SETBP1Q9Y6X0 1596 aa16.93■□□□□ 0.3
GRN-216ENST00000589923 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
GRN-216ENST00000589923 C14orf37Q86TY3 774 aa16.92■□□□□ 0.3
GRN-216ENST00000589923 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
GRN-216ENST00000589923 DCCP43146 1447 aa16.92■□□□□ 0.3
GRN-216ENST00000589923 MST1RQ04912 1400 aa16.92■□□□□ 0.3
GRN-216ENST00000589923 HDGFP51858 240 aaKnown RBP16.91■□□□□ 0.3
GRN-216ENST00000589923 MEX3CQ5U5Q3 659 aaKnown RBP16.91■□□□□ 0.3
GRN-216ENST00000589923 ZNF772Q68DY9 489 aaPredicted RBP16.91■□□□□ 0.3
GRN-216ENST00000589923 CDK12Q9NYV4 1490 aaPredicted RBP16.91■□□□□ 0.3
GRN-216ENST00000589923 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
GRN-216ENST00000589923 SETD5Q9C0A6 1442 aa16.9■□□□□ 0.3
GRN-216ENST00000589923 ATF3P18847 181 aa16.9■□□□□ 0.3
GRN-216ENST00000589923 AMOTL2Q9Y2J4 779 aa16.9■□□□□ 0.3
GRN-216ENST00000589923 EP400Q96L91 3159 aa16.89■□□□□ 0.3
GRN-216ENST00000589923 SPHKAPQ2M3C7 1700 aa16.89■□□□□ 0.29
GRN-216ENST00000589923 ROCK1Q13464 1354 aa16.89■□□□□ 0.29
GRN-216ENST00000589923 METP08581 1390 aa16.87■□□□□ 0.29
GRN-216ENST00000589923 RGS12O14924 1447 aa16.87■□□□□ 0.29
GRN-216ENST00000589923 NUTM2BA6NNL0 878 aaPredicted RBP16.86■□□□□ 0.29
GRN-216ENST00000589923 NUTM2EB1AL46 878 aaPredicted RBP16.86■□□□□ 0.29
GRN-216ENST00000589923 NUTM2AQ8IVF1 878 aaPredicted RBP16.86■□□□□ 0.29
GRN-216ENST00000589923 AFF2P51816 1311 aa16.86■□□□□ 0.29
GRN-216ENST00000589923 RXRBP28702 533 aa16.85■□□□□ 0.29
GRN-216ENST00000589923 DDX17Q92841 729 aaKnown RBP16.84■□□□□ 0.29
GRN-216ENST00000589923 NUP155O75694 1391 aa16.84■□□□□ 0.29
GRN-216ENST00000589923 PNPLA6Q8IY17 1366 aa16.84■□□□□ 0.29
GRN-216ENST00000589923 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
GRN-216ENST00000589923 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
GRN-216ENST00000589923 LAMC1P11047 1609 aa16.84■□□□□ 0.29
GRN-216ENST00000589923 CLTCL1P53675 1640 aa16.83■□□□□ 0.28
GRN-216ENST00000589923 C8orf37Q96NL8 207 aa16.77■□□□□ 0.28
GRN-216ENST00000589923 C1orf167Q5SNV9 1468 aa16.77■□□□□ 0.28
GRN-216ENST00000589923 LRRC59Q96AG4 307 aaKnown RBP16.76■□□□□ 0.27
GRN-216ENST00000589923 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
GRN-216ENST00000589923 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
GRN-216ENST00000589923 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
GRN-216ENST00000589923 PRAG1Q86YV5 1406 aa16.73■□□□□ 0.27
GRN-216ENST00000589923 RBM6P78332 1123 aaKnown RBP16.73■□□□□ 0.27
GRN-216ENST00000589923 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
GRN-216ENST00000589923 KIF1BO60333 1816 aa16.73■□□□□ 0.27
GRN-216ENST00000589923 ZNF326Q5BKZ1 582 aaKnown RBP16.72■□□□□ 0.27
GRN-216ENST00000589923 ITGAEP38570 1179 aa16.71■□□□□ 0.27
GRN-216ENST00000589923 SOS2Q07890 1332 aaPredicted RBP16.7■□□□□ 0.26
GRN-216ENST00000589923 ADAMTS2O95450 1211 aa16.7■□□□□ 0.26
GRN-216ENST00000589923 ORAI2Q96SN7 254 aa16.7■□□□□ 0.26
GRN-216ENST00000589923 MYOM2P54296 1465 aa16.68■□□□□ 0.26
GRN-216ENST00000589923 ATRNO75882 1429 aa16.68■□□□□ 0.26
GRN-216ENST00000589923 PPLO60437 1756 aa16.67■□□□□ 0.26
GRN-216ENST00000589923 MARF1Q9Y4F3 1742 aaKnown RBP16.67■□□□□ 0.26
GRN-216ENST00000589923 NGLY1Q96IV0 654 aa16.66■□□□□ 0.26
GRN-216ENST00000589923 PXDNQ92626 1479 aa16.66■□□□□ 0.26
GRN-216ENST00000589923 ATAD2Q6PL18 1390 aa16.65■□□□□ 0.26
GRN-216ENST00000589923 CDC42BPGQ6DT37 1551 aa16.65■□□□□ 0.26
GRN-216ENST00000589923 FNBP4Q8N3X1 1017 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms