RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 IFT172Q9UG01 1749 aa25.78■■□□□ 1.72
PRKCSH-209ENST00000589838 INSRP06213 1382 aa25.77■■□□□ 1.72
PRKCSH-209ENST00000589838 SYNMO15061 1565 aa25.75■■□□□ 1.71
PRKCSH-209ENST00000589838 ZMYM4Q5VZL5 1548 aa25.75■■□□□ 1.71
PRKCSH-209ENST00000589838 FRMPD1Q5SYB0 1578 aa25.74■■□□□ 1.71
PRKCSH-209ENST00000589838 UGGT1Q9NYU2 1555 aa25.74■■□□□ 1.71
PRKCSH-209ENST00000589838 CC2D1BQ5T0F9 858 aaKnown RBP25.73■■□□□ 1.71
PRKCSH-209ENST00000589838 ABCA6Q8N139 1617 aa25.72■■□□□ 1.71
PRKCSH-209ENST00000589838 KNSTRNQ9Y448 316 aa25.71■■□□□ 1.71
PRKCSH-209ENST00000589838 MROH2AA6NES4 1674 aa25.71■■□□□ 1.71
PRKCSH-209ENST00000589838 NRXN1Q9ULB1 1477 aa25.7■■□□□ 1.71
PRKCSH-209ENST00000589838 ADGRB3O60242 1522 aa25.7■■□□□ 1.71
PRKCSH-209ENST00000589838 RNF123Q5XPI4 1314 aa25.7■■□□□ 1.71
PRKCSH-209ENST00000589838 KDM5AP29375 1690 aaKnown RBP25.69■■□□□ 1.7
PRKCSH-209ENST00000589838 PDE3BQ13370 1112 aa25.68■■□□□ 1.7
PRKCSH-209ENST00000589838 GGT6Q6P531 493 aa25.67■■□□□ 1.7
PRKCSH-209ENST00000589838 ADGRF5Q8IZF2 1346 aa25.67■■□□□ 1.7
PRKCSH-209ENST00000589838 NPATQ14207 1427 aa25.67■■□□□ 1.7
PRKCSH-209ENST00000589838 CFAP70Q5T0N1 1121 aa25.66■■□□□ 1.7
PRKCSH-209ENST00000589838 ABCC3O15438 1527 aa25.65■■□□□ 1.7
PRKCSH-209ENST00000589838 RPGRIP1LQ68CZ1 1315 aa25.65■■□□□ 1.7
PRKCSH-209ENST00000589838 SETBP1Q9Y6X0 1596 aa25.65■■□□□ 1.7
PRKCSH-209ENST00000589838 NPC1L1Q9UHC9 1359 aa25.63■■□□□ 1.69
PRKCSH-209ENST00000589838 PPLO60437 1756 aa25.63■■□□□ 1.69
PRKCSH-209ENST00000589838 ASXL1Q8IXJ9 1541 aa25.62■■□□□ 1.69
PRKCSH-209ENST00000589838 CAMSAP1Q5T5Y3 1602 aa25.62■■□□□ 1.69
PRKCSH-209ENST00000589838 MYO3AQ8NEV4 1616 aa25.62■■□□□ 1.69
PRKCSH-209ENST00000589838 CFAP65Q6ZU64 1925 aaKnown RBP25.62■■□□□ 1.69
PRKCSH-209ENST00000589838 MYOM1P52179 1685 aa25.62■■□□□ 1.69
PRKCSH-209ENST00000589838 NOS1P29475 1434 aa25.61■■□□□ 1.69
PRKCSH-209ENST00000589838 BLMP54132 1417 aaPredicted RBP25.61■■□□□ 1.69
PRKCSH-209ENST00000589838 DIP2CQ9Y2E4 1556 aa25.61■■□□□ 1.69
PRKCSH-209ENST00000589838 CHGAP10645 457 aaKnown RBP25.6■■□□□ 1.69
PRKCSH-209ENST00000589838 SBNO2Q9Y2G9 1366 aa25.6■■□□□ 1.69
PRKCSH-209ENST00000589838 RICTORQ6R327 1708 aa25.6■■□□□ 1.69
PRKCSH-209ENST00000589838 AMER1Q5JTC6 1135 aaPredicted RBP25.6■■□□□ 1.69
PRKCSH-209ENST00000589838 GLI2P10070 1586 aa25.59■■□□□ 1.69
PRKCSH-209ENST00000589838 RAPGEF3O95398 923 aa25.58■■□□□ 1.69
PRKCSH-209ENST00000589838 ZC3H13Q5T200 1668 aaKnown RBP25.58■■□□□ 1.68
PRKCSH-209ENST00000589838 ERVK-7P63135 1459 aa25.57■■□□□ 1.68
PRKCSH-209ENST00000589838 RBM19Q9Y4C8 960 aaKnown RBP25.57■■□□□ 1.68
PRKCSH-209ENST00000589838 PPP2R1AP30153 589 aa25.55■■□□□ 1.68
PRKCSH-209ENST00000589838 PIK3C2GO75747 1445 aa25.55■■□□□ 1.68
PRKCSH-209ENST00000589838 C14orf93Q9H972 538 aaKnown RBP25.55■■□□□ 1.68
PRKCSH-209ENST00000589838 ARHGAP31Q2M1Z3 1444 aa25.54■■□□□ 1.68
PRKCSH-209ENST00000589838 B4GALNT3Q6L9W6 998 aa25.53■■□□□ 1.68
PRKCSH-209ENST00000589838 PIK3C2BO00750 1634 aa25.52■■□□□ 1.68
PRKCSH-209ENST00000589838 CENPJQ9HC77 1338 aaPredicted RBP25.52■■□□□ 1.68
PRKCSH-209ENST00000589838 SENP3-EIF4A1A0A087X0R7 540 aa25.51■■□□□ 1.67
PRKCSH-209ENST00000589838 WDR43Q15061 677 aaKnown RBP eCLIP25.5■■□□□ 1.671e-7■■■□□ 17.1
PRKCSH-209ENST00000589838 SIGLEC1Q9BZZ2 1709 aa25.49■■□□□ 1.67
PRKCSH-209ENST00000589838 MYT1Q01538 1121 aa25.49■■□□□ 1.67
PRKCSH-209ENST00000589838 RCAN3Q9UKA8 241 aa25.48■■□□□ 1.67
PRKCSH-209ENST00000589838 VGFO15240 615 aaPredicted RBP25.47■■□□□ 1.67
PRKCSH-209ENST00000589838 SALL2Q9Y467 1007 aaPredicted RBP25.47■■□□□ 1.67
PRKCSH-209ENST00000589838 ADGRB1O14514 1584 aa25.46■■□□□ 1.67
PRKCSH-209ENST00000589838 QRICH2Q9H0J4 1663 aa25.45■■□□□ 1.66
PRKCSH-209ENST00000589838 RRP1P56182 461 aaKnown RBP25.45■■□□□ 1.66
PRKCSH-209ENST00000589838 CYB5RLQ6IPT4 315 aa25.45■■□□□ 1.66
PRKCSH-209ENST00000589838 ADAMTS8Q9UP79 889 aa25.45■■□□□ 1.66
PRKCSH-209ENST00000589838 SLC52A1Q9NWF4 448 aa25.44■■□□□ 1.66
PRKCSH-209ENST00000589838 CCDC136Q96JN2 1154 aa25.43■■□□□ 1.66
PRKCSH-209ENST00000589838 TRAK1Q9UPV9 953 aa25.42■■□□□ 1.66
PRKCSH-209ENST00000589838 YEATS2Q9ULM3 1422 aa25.41■■□□□ 1.66
PRKCSH-209ENST00000589838 NEXMIFQ5QGS0 1516 aa25.41■■□□□ 1.66
PRKCSH-209ENST00000589838 PUS7Q96PZ0 661 aaKnown RBP25.4■■□□□ 1.66
PRKCSH-209ENST00000589838 ZFYVE9O95405 1425 aa25.4■■□□□ 1.66
PRKCSH-209ENST00000589838 RIMBP3CA6NJZ7 1639 aa25.39■■□□□ 1.65
PRKCSH-209ENST00000589838 RIMBP3BA6NNM3 1639 aa25.39■■□□□ 1.65
PRKCSH-209ENST00000589838 RIMBP3Q9UFD9 1639 aa25.39■■□□□ 1.65
PRKCSH-209ENST00000589838 CDCA7LQ96GN5 454 aa25.36■■□□□ 1.65
PRKCSH-209ENST00000589838 CARD14Q9BXL6 1004 aa25.36■■□□□ 1.65
PRKCSH-209ENST00000589838 PREX1Q8TCU6 1659 aa25.36■■□□□ 1.65
PRKCSH-209ENST00000589838 FAM69CQ0P6D2 419 aa25.35■■□□□ 1.65
PRKCSH-209ENST00000589838 IDI1Q13907 227 aa25.35■■□□□ 1.65
PRKCSH-209ENST00000589838 DIP2BQ9P265 1576 aa25.35■■□□□ 1.65
PRKCSH-209ENST00000589838 TMEM132EQ6IEE7 984 aa25.34■■□□□ 1.65
PRKCSH-209ENST00000589838 ARHGEF28Q8N1W1 1705 aaKnown RBP25.32■■□□□ 1.64
PRKCSH-209ENST00000589838 PPP6R1Q9UPN7 881 aa25.32■■□□□ 1.64
PRKCSH-209ENST00000589838 REREQ9P2R6 1566 aa25.31■■□□□ 1.64
PRKCSH-209ENST00000589838 EVC2Q86UK5 1308 aa25.31■■□□□ 1.64
PRKCSH-209ENST00000589838 FANCIQ9NVI1 1328 aa25.31■■□□□ 1.64
PRKCSH-209ENST00000589838 NGEFQ8N5V2 710 aa25.31■■□□□ 1.64
PRKCSH-209ENST00000589838 USP32Q8NFA0 1604 aa25.3■■□□□ 1.64
PRKCSH-209ENST00000589838 TMEM131LA2VDJ0 1609 aa25.29■■□□□ 1.64
PRKCSH-209ENST00000589838 NSD3Q9BZ95 1437 aa25.28■■□□□ 1.64
PRKCSH-209ENST00000589838 MYO5BQ9ULV0 1848 aa25.27■■□□□ 1.64
PRKCSH-209ENST00000589838 POLR3AO14802 1390 aaPredicted RBP25.27■■□□□ 1.64
PRKCSH-209ENST00000589838 GOLGA2Q08379 1002 aa25.27■■□□□ 1.64
PRKCSH-209ENST00000589838 AGLP35573 1532 aa25.27■■□□□ 1.64
PRKCSH-209ENST00000589838 ZNF521Q96K83 1311 aa25.26■■□□□ 1.63
PRKCSH-209ENST00000589838 PLEKHH1Q9ULM0 1364 aa25.26■■□□□ 1.63
PRKCSH-209ENST00000589838 TSPOAP1O95153 1857 aa25.25■■□□□ 1.63
PRKCSH-209ENST00000589838 MORC1Q86VD1 984 aa25.25■■□□□ 1.63
PRKCSH-209ENST00000589838 SLC12A5Q9H2X9 1139 aa25.25■■□□□ 1.63
PRKCSH-209ENST00000589838 NUTM2DQ5VT03 806 aaPredicted RBP25.24■■□□□ 1.63
PRKCSH-209ENST00000589838 EXOC6Q8TAG9 804 aa25.24■■□□□ 1.63
PRKCSH-209ENST00000589838 CGNL1Q0VF96 1302 aa25.22■■□□□ 1.63
PRKCSH-209ENST00000589838 TULP4Q9NRJ4 1543 aa25.21■■□□□ 1.63
PRKCSH-209ENST00000589838 DUSP27Q5VZP5 1158 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms