RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 ADGRB3O60242 1522 aa14.71□□□□□ -0.05
APOC1-205ENST00000589781 STRCP1A6NGW2 1772 aa14.7□□□□□ -0.06
APOC1-205ENST00000589781 TMEM131LA2VDJ0 1609 aa14.7□□□□□ -0.06
APOC1-205ENST00000589781 ZFYVE9O95405 1425 aa14.7□□□□□ -0.06
APOC1-205ENST00000589781 KDM5AP29375 1690 aaKnown RBP14.7□□□□□ -0.06
APOC1-205ENST00000589781 IQGAP1P46940 1657 aa14.7□□□□□ -0.06
APOC1-205ENST00000589781 SPHKAPQ2M3C7 1700 aa14.67□□□□□ -0.06
APOC1-205ENST00000589781 TIMELESSQ9UNS1 1208 aa14.67□□□□□ -0.06
APOC1-205ENST00000589781 IQSEC2Q5JU85 1478 aa14.67□□□□□ -0.06
APOC1-205ENST00000589781 MYO5BQ9ULV0 1848 aa14.66□□□□□ -0.06
APOC1-205ENST00000589781 ALKQ9UM73 1620 aa14.66□□□□□ -0.06
APOC1-205ENST00000589781 SENP3Q9H4L4 574 aaPredicted RBP14.65□□□□□ -0.06
APOC1-205ENST00000589781 STAG3Q9UJ98 1225 aa14.65□□□□□ -0.06
APOC1-205ENST00000589781 RIMS2Q9UQ26 1411 aa14.65□□□□□ -0.06
APOC1-205ENST00000589781 LRRC7Q96NW7 1537 aa14.64□□□□□ -0.07
APOC1-205ENST00000589781 CPS1P31327 1500 aa14.63□□□□□ -0.07
APOC1-205ENST00000589781 NUTM2DQ5VT03 806 aaPredicted RBP14.63□□□□□ -0.07
APOC1-205ENST00000589781 SLC26A8Q96RN1 970 aa14.63□□□□□ -0.07
APOC1-205ENST00000589781 EID1Q9Y6B2 187 aa14.63□□□□□ -0.07
APOC1-205ENST00000589781 ZNF316A6NFI3 1004 aaPredicted RBP14.62□□□□□ -0.07
APOC1-205ENST00000589781 PPP1R15AO75807 674 aaPredicted RBP14.62□□□□□ -0.07
APOC1-205ENST00000589781 CHGAP10645 457 aaKnown RBP14.61□□□□□ -0.07
APOC1-205ENST00000589781 CLTCL1P53675 1640 aa14.61□□□□□ -0.07
APOC1-205ENST00000589781 TRPM2O94759 1503 aa14.61□□□□□ -0.07
APOC1-205ENST00000589781 ADAMTS13Q76LX8 1427 aa14.6□□□□□ -0.07
APOC1-205ENST00000589781 PLEKHG1Q9ULL1 1385 aa14.6□□□□□ -0.07
APOC1-205ENST00000589781 CCDC144AA2RUR9 1427 aa14.58□□□□□ -0.07
APOC1-205ENST00000589781 UBAP1LF5GYI3 381 aa14.58□□□□□ -0.08
APOC1-205ENST00000589781 L3MBTL2Q969R5 705 aa14.58□□□□□ -0.08
APOC1-205ENST00000589781 KCNA6P17658 529 aa14.56□□□□□ -0.08
APOC1-205ENST00000589781 RBM33Q96EV2 1170 aaKnown RBP14.56□□□□□ -0.08
APOC1-205ENST00000589781 XIRP1Q702N8 1843 aaKnown RBP14.56□□□□□ -0.08
APOC1-205ENST00000589781 NWD1Q149M9 1564 aa14.55□□□□□ -0.08
APOC1-205ENST00000589781 NRXN3Q9Y4C0 1643 aa14.55□□□□□ -0.08
APOC1-205ENST00000589781 TBX22Q9Y458 520 aa14.54□□□□□ -0.08
APOC1-205ENST00000589781 PTPRUQ92729 1446 aa14.54□□□□□ -0.08
APOC1-205ENST00000589781 NEXMIFQ5QGS0 1516 aa14.54□□□□□ -0.08
APOC1-205ENST00000589781 TMEM94Q12767 1356 aa14.52□□□□□ -0.08
APOC1-205ENST00000589781 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.52□□□□□ -0.09
APOC1-205ENST00000589781 KIF1BO60333 1816 aa14.52□□□□□ -0.09
APOC1-205ENST00000589781 NBPF8Q3BBV2 869 aa14.5□□□□□ -0.09
APOC1-205ENST00000589781 SPATA31E1Q6ZUB1 1445 aa14.49□□□□□ -0.09
APOC1-205ENST00000589781 METP08581 1390 aa14.49□□□□□ -0.09
APOC1-205ENST00000589781 SETBP1Q9Y6X0 1596 aa14.49□□□□□ -0.09
APOC1-205ENST00000589781 PIP4K2BP78356 416 aa14.49□□□□□ -0.09
APOC1-205ENST00000589781 BCANQ96GW7 911 aa14.49□□□□□ -0.09
APOC1-205ENST00000589781 CHD2O14647 1828 aaKnown RBP14.49□□□□□ -0.09
APOC1-205ENST00000589781 TRPM1Q7Z4N2 1603 aa14.48□□□□□ -0.09
APOC1-205ENST00000589781 HSPA1LP34931 641 aa14.48□□□□□ -0.09
APOC1-205ENST00000589781 HDGFP51858 240 aaKnown RBP14.48□□□□□ -0.09
APOC1-205ENST00000589781 PROSER2Q86WR7 435 aaPredicted RBP14.48□□□□□ -0.09
APOC1-205ENST00000589781 RALGAPBQ86X10 1494 aa14.48□□□□□ -0.09
APOC1-205ENST00000589781 IFT172Q9UG01 1749 aa14.47□□□□□ -0.09
APOC1-205ENST00000589781 NKTRP30414 1462 aaKnown RBP14.47□□□□□ -0.09
APOC1-205ENST00000589781 TOM1O60784 492 aa14.47□□□□□ -0.09
APOC1-205ENST00000589781 ZNF326Q5BKZ1 582 aaKnown RBP14.47□□□□□ -0.09
APOC1-205ENST00000589781 DIEXFQ68CQ4 756 aaKnown RBP14.47□□□□□ -0.09
APOC1-205ENST00000589781 DIP2AQ14689 1571 aa14.46□□□□□ -0.09
APOC1-205ENST00000589781 AMOTL2Q9Y2J4 779 aa14.45□□□□□ -0.1
APOC1-205ENST00000589781 ADGRF5Q8IZF2 1346 aa14.44□□□□□ -0.1
APOC1-205ENST00000589781 PRAG1Q86YV5 1406 aa14.44□□□□□ -0.1
APOC1-205ENST00000589781 HIRIP3Q9BW71 556 aaPredicted RBP14.44□□□□□ -0.1
APOC1-205ENST00000589781 PIK3R4Q99570 1358 aa14.44□□□□□ -0.1
APOC1-205ENST00000589781 RGL3Q3MIN7 710 aa14.43□□□□□ -0.1
APOC1-205ENST00000589781 DCAF11Q8TEB1 546 aa14.43□□□□□ -0.1
APOC1-205ENST00000589781 KDM2AQ9Y2K7 1162 aa14.43□□□□□ -0.1
APOC1-205ENST00000589781 SETD1AO15047 1707 aaKnown RBP14.43□□□□□ -0.1
APOC1-205ENST00000589781 XRN1Q8IZH2 1706 aaKnown RBP14.43□□□□□ -0.1
APOC1-205ENST00000589781 RPGRIP1LQ68CZ1 1315 aa14.41□□□□□ -0.1
APOC1-205ENST00000589781 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
APOC1-205ENST00000589781 HSPA5P11021 654 aaKnown RBP14.41□□□□□ -0.1
APOC1-205ENST00000589781 PPLO60437 1756 aa14.41□□□□□ -0.1
APOC1-205ENST00000589781 LAMC1P11047 1609 aa14.41□□□□□ -0.1
APOC1-205ENST00000589781 VGFO15240 615 aaPredicted RBP14.39□□□□□ -0.11
APOC1-205ENST00000589781 FAM135BQ49AJ0 1406 aa14.39□□□□□ -0.11
APOC1-205ENST00000589781 NCOA3Q9Y6Q9 1424 aa14.38□□□□□ -0.11
APOC1-205ENST00000589781 MYOM2P54296 1465 aa14.38□□□□□ -0.11
APOC1-205ENST00000589781 ROBO2Q9HCK4 1378 aa14.37□□□□□ -0.11
APOC1-205ENST00000589781 ASXL1Q8IXJ9 1541 aa14.37□□□□□ -0.11
APOC1-205ENST00000589781 EIF4G2P78344 907 aaKnown RBP eCLIP14.37□□□□□ -0.11
APOC1-205ENST00000589781 USP47Q96K76 1375 aa14.36□□□□□ -0.11
APOC1-205ENST00000589781 ROCK2O75116 1388 aaKnown RBP14.35□□□□□ -0.11
APOC1-205ENST00000589781 KIAA1210Q9ULL0 1709 aa14.35□□□□□ -0.11
APOC1-205ENST00000589781 SLAIN2Q9P270 581 aa14.35□□□□□ -0.11
APOC1-205ENST00000589781 NRXN1Q9ULB1 1477 aa14.35□□□□□ -0.11
APOC1-205ENST00000589781 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.35□□□□□ -0.11
APOC1-205ENST00000589781 MSH6P52701 1360 aa14.34□□□□□ -0.11
APOC1-205ENST00000589781 PIK3C2GO75747 1445 aa14.34□□□□□ -0.11
APOC1-205ENST00000589781 C19orf44Q9H6X5 657 aa14.34□□□□□ -0.11
APOC1-205ENST00000589781 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.11
APOC1-205ENST00000589781 ILDR2Q71H61 639 aa14.33□□□□□ -0.12
APOC1-205ENST00000589781 TMEM132EQ6IEE7 984 aa14.32□□□□□ -0.12
APOC1-205ENST00000589781 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
APOC1-205ENST00000589781 GPRASP1Q5JY77 1395 aa14.31□□□□□ -0.12
APOC1-205ENST00000589781 MST1RQ04912 1400 aa14.31□□□□□ -0.12
APOC1-205ENST00000589781 PTCH1Q13635 1447 aa14.31□□□□□ -0.12
APOC1-205ENST00000589781 CFAP70Q5T0N1 1121 aa14.3□□□□□ -0.12
APOC1-205ENST00000589781 C14orf93Q9H972 538 aaKnown RBP14.3□□□□□ -0.12
APOC1-205ENST00000589781 DISP3Q9P2K9 1392 aa14.3□□□□□ -0.12
APOC1-205ENST00000589781 ADGRL3Q9HAR2 1447 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms