RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
MBD1-218ENST00000589541 ROCK1Q13464 1354 aa18.14■□□□□ 0.49
MBD1-218ENST00000589541 UNC13BO14795 1591 aa18.13■□□□□ 0.49
MBD1-218ENST00000589541 PPP1R15AO75807 674 aaPredicted RBP18.12■□□□□ 0.49
MBD1-218ENST00000589541 ZFYVE9O95405 1425 aa18.12■□□□□ 0.49
MBD1-218ENST00000589541 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
MBD1-218ENST00000589541 RIMS2Q9UQ26 1411 aa18.11■□□□□ 0.49
MBD1-218ENST00000589541 GCC2Q8IWJ2 1684 aa18.1■□□□□ 0.49
MBD1-218ENST00000589541 PLEKHG1Q9ULL1 1385 aa18.1■□□□□ 0.49
MBD1-218ENST00000589541 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
MBD1-218ENST00000589541 HDGFP51858 240 aaKnown RBP18.09■□□□□ 0.49
MBD1-218ENST00000589541 NKTRP30414 1462 aaKnown RBP18.08■□□□□ 0.49
MBD1-218ENST00000589541 FAM135BQ49AJ0 1406 aa18.08■□□□□ 0.49
MBD1-218ENST00000589541 NUP155O75694 1391 aa18.08■□□□□ 0.49
MBD1-218ENST00000589541 NWD1Q149M9 1564 aa18.08■□□□□ 0.48
MBD1-218ENST00000589541 MYO5BQ9ULV0 1848 aa18.07■□□□□ 0.48
MBD1-218ENST00000589541 E9PCH4 1651 aa18.07■□□□□ 0.48
MBD1-218ENST00000589541 NUTM2DQ5VT03 806 aaPredicted RBP18.07■□□□□ 0.48
MBD1-218ENST00000589541 IQGAP3Q86VI3 1631 aa18.06■□□□□ 0.48
MBD1-218ENST00000589541 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.05■□□□□ 0.48
MBD1-218ENST00000589541 MSH6P52701 1360 aa18.04■□□□□ 0.48
MBD1-218ENST00000589541 TBX22Q9Y458 520 aa18.03■□□□□ 0.48
MBD1-218ENST00000589541 ROBO1Q9Y6N7 1651 aa18.03■□□□□ 0.48
MBD1-218ENST00000589541 SLAIN2Q9P270 581 aa18.01■□□□□ 0.47
MBD1-218ENST00000589541 ADAMTS13Q76LX8 1427 aa17.99■□□□□ 0.47
MBD1-218ENST00000589541 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
MBD1-218ENST00000589541 CHD2O14647 1828 aaKnown RBP17.99■□□□□ 0.47
MBD1-218ENST00000589541 RGS17Q9UGC6 210 aaPredicted RBP17.98■□□□□ 0.47
MBD1-218ENST00000589541 DIP2AQ14689 1571 aa17.96■□□□□ 0.46
MBD1-218ENST00000589541 PIK3R4Q99570 1358 aa17.94■□□□□ 0.46
MBD1-218ENST00000589541 NCOA3Q9Y6Q9 1424 aa17.94■□□□□ 0.46
MBD1-218ENST00000589541 ZNF326Q5BKZ1 582 aaKnown RBP17.93■□□□□ 0.46
MBD1-218ENST00000589541 C19orf44Q9H6X5 657 aa17.92■□□□□ 0.46
MBD1-218ENST00000589541 AMOTL2Q9Y2J4 779 aa17.92■□□□□ 0.46
MBD1-218ENST00000589541 TRPM2O94759 1503 aa17.92■□□□□ 0.46
MBD1-218ENST00000589541 PTPRUQ92729 1446 aa17.91■□□□□ 0.46
MBD1-218ENST00000589541 RRBP1Q9P2E9 1410 aaKnown RBP17.91■□□□□ 0.46
MBD1-218ENST00000589541 ATF3P18847 181 aa17.91■□□□□ 0.46
MBD1-218ENST00000589541 PHLPP1O60346 1717 aa17.91■□□□□ 0.46
MBD1-218ENST00000589541 SPHKAPQ2M3C7 1700 aa17.91■□□□□ 0.46
MBD1-218ENST00000589541 CADPS2Q86UW7 1296 aa17.9■□□□□ 0.46
MBD1-218ENST00000589541 JCADQ9P266 1359 aa17.89■□□□□ 0.45
MBD1-218ENST00000589541 NAIPQ13075 1403 aa17.89■□□□□ 0.45
MBD1-218ENST00000589541 POTEAQ6S8J7 498 aa17.88■□□□□ 0.45
MBD1-218ENST00000589541 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.87■□□□□ 0.45
MBD1-218ENST00000589541 SETBP1Q9Y6X0 1596 aa17.87■□□□□ 0.45
MBD1-218ENST00000589541 NRXN3Q9Y4C0 1643 aa17.87■□□□□ 0.45
MBD1-218ENST00000589541 METP08581 1390 aa17.85■□□□□ 0.45
MBD1-218ENST00000589541 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
MBD1-218ENST00000589541 COL16A1Q07092 1604 aaPredicted RBP17.85■□□□□ 0.45
MBD1-218ENST00000589541 TRIM52Q96A61 297 aa17.84■□□□□ 0.45
MBD1-218ENST00000589541 BRINP3Q76B58 766 aa17.83■□□□□ 0.44
MBD1-218ENST00000589541 XRN1Q8IZH2 1706 aaKnown RBP17.83■□□□□ 0.44
MBD1-218ENST00000589541 NEXMIFQ5QGS0 1516 aa17.82■□□□□ 0.44
MBD1-218ENST00000589541 AHDC1Q5TGY3 1603 aaPredicted RBP17.81■□□□□ 0.44
MBD1-218ENST00000589541 HFM1A2PYH4 1435 aa17.81■□□□□ 0.44
MBD1-218ENST00000589541 DCCP43146 1447 aa17.81■□□□□ 0.44
MBD1-218ENST00000589541 SPATA31A6Q5VVP1 1343 aa17.8■□□□□ 0.44
MBD1-218ENST00000589541 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
MBD1-218ENST00000589541 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
MBD1-218ENST00000589541 LRP6O75581 1613 aa17.79■□□□□ 0.44
MBD1-218ENST00000589541 MST1RQ04912 1400 aa17.77■□□□□ 0.44
MBD1-218ENST00000589541 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.43
MBD1-218ENST00000589541 VGFO15240 615 aaPredicted RBP17.76■□□□□ 0.43
MBD1-218ENST00000589541 KIF1BO60333 1816 aa17.76■□□□□ 0.43
MBD1-218ENST00000589541 ADGRL3Q9HAR2 1447 aa17.75■□□□□ 0.43
MBD1-218ENST00000589541 NUTM2BA6NNL0 878 aaPredicted RBP17.74■□□□□ 0.43
MBD1-218ENST00000589541 NUTM2EB1AL46 878 aaPredicted RBP17.74■□□□□ 0.43
MBD1-218ENST00000589541 NUTM2AQ8IVF1 878 aaPredicted RBP17.74■□□□□ 0.43
MBD1-218ENST00000589541 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
MBD1-218ENST00000589541 FOXD1Q16676 465 aa17.73■□□□□ 0.43
MBD1-218ENST00000589541 DDX17Q92841 729 aaKnown RBP17.72■□□□□ 0.43
MBD1-218ENST00000589541 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
MBD1-218ENST00000589541 ZNF772Q68DY9 489 aaPredicted RBP17.71■□□□□ 0.43
MBD1-218ENST00000589541 NALCNQ8IZF0 1738 aa17.71■□□□□ 0.43
MBD1-218ENST00000589541 ROBO2Q9HCK4 1378 aa17.7■□□□□ 0.42
MBD1-218ENST00000589541 PTCH1Q13635 1447 aa17.7■□□□□ 0.42
MBD1-218ENST00000589541 SETD5Q9C0A6 1442 aa17.7■□□□□ 0.42
MBD1-218ENST00000589541 LRRC59Q96AG4 307 aaKnown RBP17.69■□□□□ 0.42
MBD1-218ENST00000589541 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
MBD1-218ENST00000589541 NHSL1Q5SYE7 1610 aa17.68■□□□□ 0.42
MBD1-218ENST00000589541 C1orf167Q5SNV9 1468 aa17.67■□□□□ 0.42
MBD1-218ENST00000589541 CCDC144AA2RUR9 1427 aa17.65■□□□□ 0.42
MBD1-218ENST00000589541 RGL3Q3MIN7 710 aa17.65■□□□□ 0.42
MBD1-218ENST00000589541 PPLO60437 1756 aa17.65■□□□□ 0.42
MBD1-218ENST00000589541 PNPLA6Q8IY17 1366 aa17.65■□□□□ 0.42
MBD1-218ENST00000589541 ORAI2Q96SN7 254 aa17.64■□□□□ 0.41
MBD1-218ENST00000589541 MPHOSPH9Q99550 1183 aa17.64■□□□□ 0.41
MBD1-218ENST00000589541 AFF2P51816 1311 aa17.64■□□□□ 0.41
MBD1-218ENST00000589541 PRAG1Q86YV5 1406 aa17.64■□□□□ 0.41
MBD1-218ENST00000589541 RXRBP28702 533 aa17.63■□□□□ 0.41
MBD1-218ENST00000589541 ADGRF5Q8IZF2 1346 aa17.63■□□□□ 0.41
MBD1-218ENST00000589541 C8orf37Q96NL8 207 aa17.62■□□□□ 0.41
MBD1-218ENST00000589541 STK26Q9P289 416 aa17.6■□□□□ 0.41
MBD1-218ENST00000589541 SPATA31E1Q6ZUB1 1445 aa17.6■□□□□ 0.41
MBD1-218ENST00000589541 ADAMTS2O95450 1211 aa17.59■□□□□ 0.41
MBD1-218ENST00000589541 ANKRD30BQ9BXX2 1392 aa17.58■□□□□ 0.4
MBD1-218ENST00000589541 SOS2Q07890 1332 aaPredicted RBP17.58■□□□□ 0.4
MBD1-218ENST00000589541 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
MBD1-218ENST00000589541 LAMC1P11047 1609 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms