RNA–Protein interactions for RNA: ENST00000589536.5

GRN-215, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-215ENST00000589536 SLC26A8Q96RN1 970 aa37.33■■■■□ 3.57
GRN-215ENST00000589536 ILDR2Q71H61 639 aa37.32■■■■□ 3.56
GRN-215ENST00000589536 RIMS2Q9UQ26 1411 aa37.31■■■■□ 3.56
GRN-215ENST00000589536 KCNA6P17658 529 aa37.29■■■■□ 3.56
GRN-215ENST00000589536 NWD1Q149M9 1564 aa37.29■■■■□ 3.56
GRN-215ENST00000589536 PLEKHG1Q9ULL1 1385 aa37.29■■■■□ 3.56
GRN-215ENST00000589536 NKTRP30414 1462 aaKnown RBP37.23■■■■□ 3.55
GRN-215ENST00000589536 TMEM94Q12767 1356 aa37.23■■■■□ 3.55
GRN-215ENST00000589536 CHGAP10645 457 aaKnown RBP37.21■■■■□ 3.55
GRN-215ENST00000589536 HDGFP51858 240 aaKnown RBP37.21■■■■□ 3.55
GRN-215ENST00000589536 PPP1R15AO75807 674 aaPredicted RBP37.2■■■■□ 3.55
GRN-215ENST00000589536 BCANQ96GW7 911 aa37.2■■■■□ 3.55
GRN-215ENST00000589536 NAIPQ13075 1403 aa37.19■■■■□ 3.54
GRN-215ENST00000589536 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.17■■■■□ 3.54
GRN-215ENST00000589536 SENP3Q9H4L4 574 aaPredicted RBP37.17■■■■□ 3.54
GRN-215ENST00000589536 MED1Q15648 1581 aaPredicted RBP37.17■■■■□ 3.54
GRN-215ENST00000589536 SPHKAPQ2M3C7 1700 aa37.16■■■■□ 3.54
GRN-215ENST00000589536 PROSER2Q86WR7 435 aaPredicted RBP37.14■■■■□ 3.54
GRN-215ENST00000589536 CHD2O14647 1828 aaKnown RBP37.13■■■■□ 3.53
GRN-215ENST00000589536 ADAMTS13Q76LX8 1427 aa37.11■■■■□ 3.53
GRN-215ENST00000589536 RBM33Q96EV2 1170 aaKnown RBP37.11■■■■□ 3.53
GRN-215ENST00000589536 TBX22Q9Y458 520 aa37.11■■■■□ 3.53
GRN-215ENST00000589536 NUTM2DQ5VT03 806 aaPredicted RBP37.09■■■■□ 3.53
GRN-215ENST00000589536 DIP2AQ14689 1571 aa37.08■■■■□ 3.53
GRN-215ENST00000589536 HFM1A2PYH4 1435 aa37.07■■■■□ 3.52
GRN-215ENST00000589536 FAM135BQ49AJ0 1406 aa37.07■■■■□ 3.52
GRN-215ENST00000589536 SOCS7O14512 581 aa37.03■■■■□ 3.52
GRN-215ENST00000589536 TRPM2O94759 1503 aa37.01■■■■□ 3.52
GRN-215ENST00000589536 MSH6P52701 1360 aa37■■■■□ 3.51
GRN-215ENST00000589536 PIK3R4Q99570 1358 aa37■■■■□ 3.51
GRN-215ENST00000589536 CLTCL1P53675 1640 aa36.99■■■■□ 3.51
GRN-215ENST00000589536 ROBO1Q9Y6N7 1651 aa36.97■■■■□ 3.51
GRN-215ENST00000589536 NRXN3Q9Y4C0 1643 aa36.96■■■■□ 3.51
GRN-215ENST00000589536 SETBP1Q9Y6X0 1596 aa36.95■■■■□ 3.51
GRN-215ENST00000589536 NCOA3Q9Y6Q9 1424 aa36.94■■■■□ 3.5
GRN-215ENST00000589536 PTPRUQ92729 1446 aa36.9■■■■□ 3.5
GRN-215ENST00000589536 ZNF326Q5BKZ1 582 aaKnown RBP36.89■■■■□ 3.5
GRN-215ENST00000589536 NEXMIFQ5QGS0 1516 aa36.89■■■■□ 3.5
GRN-215ENST00000589536 TRIM52Q96A61 297 aa36.88■■■■□ 3.49
GRN-215ENST00000589536 SLAIN2Q9P270 581 aa36.85■■■■□ 3.49
GRN-215ENST00000589536 KIF1BO60333 1816 aa36.84■■■■□ 3.49
GRN-215ENST00000589536 XRN1Q8IZH2 1706 aaKnown RBP36.83■■■■□ 3.49
GRN-215ENST00000589536 AMOTL2Q9Y2J4 779 aa36.83■■■■□ 3.49
GRN-215ENST00000589536 PHF23Q9BUL5 403 aaPredicted RBP36.81■■■■□ 3.48
GRN-215ENST00000589536 SLC4A1APQ9BWU0 796 aaKnown RBP36.81■■■■□ 3.48
GRN-215ENST00000589536 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.8■■■■□ 3.48
GRN-215ENST00000589536 C14orf37Q86TY3 774 aa36.78■■■■□ 3.48
GRN-215ENST00000589536 METP08581 1390 aa36.78■■■■□ 3.48
GRN-215ENST00000589536 C19orf44Q9H6X5 657 aa36.77■■■■□ 3.48
GRN-215ENST00000589536 CADPS2Q86UW7 1296 aa36.73■■■■□ 3.47
GRN-215ENST00000589536 PHLPP1O60346 1717 aa36.72■■■■□ 3.47
GRN-215ENST00000589536 ATF3P18847 181 aa36.69■■■■□ 3.46
GRN-215ENST00000589536 DCCP43146 1447 aa36.68■■■■□ 3.46
GRN-215ENST00000589536 COL16A1Q07092 1604 aaPredicted RBP36.67■■■■□ 3.46
GRN-215ENST00000589536 SETD1AO15047 1707 aaKnown RBP36.65■■■■□ 3.46
GRN-215ENST00000589536 FOXD1Q16676 465 aa36.64■■■■□ 3.46
GRN-215ENST00000589536 RGS17Q9UGC6 210 aaPredicted RBP36.64■■■■□ 3.46
GRN-215ENST00000589536 RPGRIP1LQ68CZ1 1315 aa36.63■■■■□ 3.45
GRN-215ENST00000589536 VGFO15240 615 aaPredicted RBP36.63■■■■□ 3.45
GRN-215ENST00000589536 AHDC1Q5TGY3 1603 aaPredicted RBP36.62■■■■□ 3.45
GRN-215ENST00000589536 PPLO60437 1756 aa36.61■■■■□ 3.45
GRN-215ENST00000589536 JCADQ9P266 1359 aa36.61■■■■□ 3.45
GRN-215ENST00000589536 MPHOSPH9Q99550 1183 aa36.57■■■■□ 3.44
GRN-215ENST00000589536 ADGRL3Q9HAR2 1447 aa36.57■■■■□ 3.44
GRN-215ENST00000589536 CCDC144AA2RUR9 1427 aa36.56■■■■□ 3.44
GRN-215ENST00000589536 MST1RQ04912 1400 aa36.55■■■■□ 3.44
GRN-215ENST00000589536 BRINP3Q76B58 766 aa36.55■■■■□ 3.44
GRN-215ENST00000589536 NALCNQ8IZF0 1738 aa36.54■■■■□ 3.44
GRN-215ENST00000589536 PTCH1Q13635 1447 aa36.54■■■■□ 3.44
GRN-215ENST00000589536 PRAG1Q86YV5 1406 aa36.53■■■■□ 3.44
GRN-215ENST00000589536 SPATA31E1Q6ZUB1 1445 aa36.52■■■■□ 3.44
GRN-215ENST00000589536 ASXL1Q8IXJ9 1541 aa36.51■■■■□ 3.44
GRN-215ENST00000589536 ROBO2Q9HCK4 1378 aa36.48■■■■□ 3.43
GRN-215ENST00000589536 SETD5Q9C0A6 1442 aa36.48■■■■□ 3.43
GRN-215ENST00000589536 SHPRHQ149N8 1683 aa36.45■■■■□ 3.43
GRN-215ENST00000589536 ACIN1Q9UKV3 1341 aaKnown RBP36.44■■■■□ 3.42
GRN-215ENST00000589536 IFT172Q9UG01 1749 aa36.44■■■■□ 3.42
GRN-215ENST00000589536 SPATA31A6Q5VVP1 1343 aa36.43■■■■□ 3.42
GRN-215ENST00000589536 LRP6O75581 1613 aa36.43■■■■□ 3.42
GRN-215ENST00000589536 NHSL1Q5SYE7 1610 aa36.43■■■■□ 3.42
GRN-215ENST00000589536 ADGRF5Q8IZF2 1346 aa36.42■■■■□ 3.42
GRN-215ENST00000589536 POTEAQ6S8J7 498 aa36.41■■■■□ 3.42
GRN-215ENST00000589536 RGL3Q3MIN7 710 aa36.4■■■■□ 3.42
GRN-215ENST00000589536 ANKRD30BQ9BXX2 1392 aa36.4■■■■□ 3.42
GRN-215ENST00000589536 RAB3GAP2Q9H2M9 1393 aa36.36■■■■□ 3.41
GRN-215ENST00000589536 C1orf167Q5SNV9 1468 aa36.35■■■■□ 3.41
GRN-215ENST00000589536 PIK3C2GO75747 1445 aa36.32■■■■□ 3.4
GRN-215ENST00000589536 TECPR2O15040 1411 aa36.29■■■■□ 3.4
GRN-215ENST00000589536 LAMC1P11047 1609 aa36.27■■■■□ 3.4
GRN-215ENST00000589536 DDX17Q92841 729 aaKnown RBP36.27■■■■□ 3.4
GRN-215ENST00000589536 LRPPRCP42704 1394 aaKnown RBP36.25■■■■□ 3.39
GRN-215ENST00000589536 CDC42BPGQ6DT37 1551 aa36.24■■■■□ 3.39
GRN-215ENST00000589536 MEX3CQ5U5Q3 659 aaKnown RBP36.24■■■■□ 3.39
GRN-215ENST00000589536 LRRC59Q96AG4 307 aaKnown RBP36.24■■■■□ 3.39
GRN-215ENST00000589536 KNDC1Q76NI1 1749 aa36.22■■■■□ 3.39
GRN-215ENST00000589536 ABCC11Q96J66 1382 aa36.21■■■■□ 3.39
GRN-215ENST00000589536 NRXN1Q9ULB1 1477 aa36.21■■■■□ 3.39
GRN-215ENST00000589536 MYOM2P54296 1465 aa36.2■■■■□ 3.39
GRN-215ENST00000589536 ORAI2Q96SN7 254 aa36.2■■■■□ 3.39
GRN-215ENST00000589536 PNPLA6Q8IY17 1366 aa36.19■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms