RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 MYO5BQ9ULV0 1848 aa23.7■■□□□ 1.39
ACTN4-211ENST00000589528 NWD1Q149M9 1564 aa23.7■■□□□ 1.38
ACTN4-211ENST00000589528 PPP1R15AO75807 674 aaPredicted RBP23.7■■□□□ 1.38
ACTN4-211ENST00000589528 PHLPP1O60346 1717 aa23.69■■□□□ 1.38
ACTN4-211ENST00000589528 HDGFP51858 240 aaKnown RBP23.67■■□□□ 1.38
ACTN4-211ENST00000589528 FAM50AQ14320 339 aaKnown RBP23.67■■□□□ 1.38
ACTN4-211ENST00000589528 RPRD2Q5VT52 1461 aaKnown RBP23.67■■□□□ 1.38
ACTN4-211ENST00000589528 GCC2Q8IWJ2 1684 aa23.67■■□□□ 1.38
ACTN4-211ENST00000589528 POTEAQ6S8J7 498 aa23.66■■□□□ 1.38
ACTN4-211ENST00000589528 ADGRL2O95490 1459 aa23.66■■□□□ 1.38
ACTN4-211ENST00000589528 CHD2O14647 1828 aaKnown RBP23.65■■□□□ 1.38
ACTN4-211ENST00000589528 SLAIN2Q9P270 581 aa23.64■■□□□ 1.37
ACTN4-211ENST00000589528 ANKRD50Q9ULJ7 1429 aa23.63■■□□□ 1.37
ACTN4-211ENST00000589528 PLEKHG1Q9ULL1 1385 aa23.63■■□□□ 1.37
ACTN4-211ENST00000589528 RIMS2Q9UQ26 1411 aa23.61■■□□□ 1.37
ACTN4-211ENST00000589528 CHGAP10645 457 aaKnown RBP23.61■■□□□ 1.37
ACTN4-211ENST00000589528 C14orf37Q86TY3 774 aa23.61■■□□□ 1.37
ACTN4-211ENST00000589528 ZFYVE9O95405 1425 aa23.6■■□□□ 1.37
ACTN4-211ENST00000589528 JCADQ9P266 1359 aa23.6■■□□□ 1.37
ACTN4-211ENST00000589528 TMEM131LA2VDJ0 1609 aa23.58■■□□□ 1.36
ACTN4-211ENST00000589528 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
ACTN4-211ENST00000589528 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
ACTN4-211ENST00000589528 TBX22Q9Y458 520 aa23.54■■□□□ 1.36
ACTN4-211ENST00000589528 MEX3CQ5U5Q3 659 aaKnown RBP23.53■■□□□ 1.36
ACTN4-211ENST00000589528 COL16A1Q07092 1604 aaPredicted RBP23.52■■□□□ 1.36
ACTN4-211ENST00000589528 NCOA3Q9Y6Q9 1424 aa23.52■■□□□ 1.36
ACTN4-211ENST00000589528 UNC13BO14795 1591 aa23.52■■□□□ 1.36
ACTN4-211ENST00000589528 NUTM2DQ5VT03 806 aaPredicted RBP23.51■■□□□ 1.35
ACTN4-211ENST00000589528 DIP2AQ14689 1571 aa23.51■■□□□ 1.35
ACTN4-211ENST00000589528 E9PCH4 1651 aa23.51■■□□□ 1.35
ACTN4-211ENST00000589528 ATF3P18847 181 aa23.5■■□□□ 1.35
ACTN4-211ENST00000589528 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.5■■□□□ 1.35
ACTN4-211ENST00000589528 CADPS2Q86UW7 1296 aa23.49■■□□□ 1.35
ACTN4-211ENST00000589528 SPATA31A6Q5VVP1 1343 aa23.48■■□□□ 1.35
ACTN4-211ENST00000589528 C19orf44Q9H6X5 657 aa23.46■■□□□ 1.35
ACTN4-211ENST00000589528 TRPM2O94759 1503 aa23.45■■□□□ 1.34
ACTN4-211ENST00000589528 ADAMTS13Q76LX8 1427 aa23.45■■□□□ 1.34
ACTN4-211ENST00000589528 PIK3R4Q99570 1358 aa23.45■■□□□ 1.34
ACTN4-211ENST00000589528 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
ACTN4-211ENST00000589528 ZNF772Q68DY9 489 aaPredicted RBP23.44■■□□□ 1.34
ACTN4-211ENST00000589528 AHDC1Q5TGY3 1603 aaPredicted RBP23.44■■□□□ 1.34
ACTN4-211ENST00000589528 SHPRHQ149N8 1683 aa23.43■■□□□ 1.34
ACTN4-211ENST00000589528 LRP6O75581 1613 aa23.42■■□□□ 1.34
ACTN4-211ENST00000589528 AMOTL2Q9Y2J4 779 aa23.4■■□□□ 1.34
ACTN4-211ENST00000589528 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
ACTN4-211ENST00000589528 NUP155O75694 1391 aa23.39■■□□□ 1.33
ACTN4-211ENST00000589528 TRIM52Q96A61 297 aa23.38■■□□□ 1.33
ACTN4-211ENST00000589528 NUTM2BA6NNL0 878 aaPredicted RBP23.36■■□□□ 1.33
ACTN4-211ENST00000589528 NUTM2EB1AL46 878 aaPredicted RBP23.36■■□□□ 1.33
ACTN4-211ENST00000589528 NUTM2AQ8IVF1 878 aaPredicted RBP23.36■■□□□ 1.33
ACTN4-211ENST00000589528 ITGAEP38570 1179 aa23.35■■□□□ 1.33
ACTN4-211ENST00000589528 BRINP3Q76B58 766 aa23.35■■□□□ 1.33
ACTN4-211ENST00000589528 PTPRUQ92729 1446 aa23.34■■□□□ 1.33
ACTN4-211ENST00000589528 ZNF326Q5BKZ1 582 aaKnown RBP23.34■■□□□ 1.33
ACTN4-211ENST00000589528 DCCP43146 1447 aa23.33■■□□□ 1.33
ACTN4-211ENST00000589528 SPHKAPQ2M3C7 1700 aa23.33■■□□□ 1.33
ACTN4-211ENST00000589528 RXRBP28702 533 aa23.32■■□□□ 1.32
ACTN4-211ENST00000589528 ASXL1Q8IXJ9 1541 aa23.31■■□□□ 1.32
ACTN4-211ENST00000589528 XRN1Q8IZH2 1706 aaKnown RBP23.3■■□□□ 1.32
ACTN4-211ENST00000589528 UPF1Q92900 1129 aaKnown RBP eCLIP23.3■■□□□ 1.323e-27■■■■■ 57.8
ACTN4-211ENST00000589528 NRXN3Q9Y4C0 1643 aa23.3■■□□□ 1.32
ACTN4-211ENST00000589528 SETBP1Q9Y6X0 1596 aa23.29■■□□□ 1.32
ACTN4-211ENST00000589528 NHSL1Q5SYE7 1610 aa23.26■■□□□ 1.31
ACTN4-211ENST00000589528 AFF2P51816 1311 aa23.26■■□□□ 1.31
ACTN4-211ENST00000589528 MST1RQ04912 1400 aa23.25■■□□□ 1.31
ACTN4-211ENST00000589528 LRRC59Q96AG4 307 aaKnown RBP23.25■■□□□ 1.31
ACTN4-211ENST00000589528 SETD5Q9C0A6 1442 aa23.25■■□□□ 1.31
ACTN4-211ENST00000589528 METP08581 1390 aa23.23■■□□□ 1.31
ACTN4-211ENST00000589528 CDK12Q9NYV4 1490 aaPredicted RBP23.23■■□□□ 1.31
ACTN4-211ENST00000589528 KIF1BO60333 1816 aa23.22■■□□□ 1.31
ACTN4-211ENST00000589528 C8orf37Q96NL8 207 aa23.21■■□□□ 1.31
ACTN4-211ENST00000589528 ADGRL3Q9HAR2 1447 aa23.21■■□□□ 1.31
ACTN4-211ENST00000589528 NALCNQ8IZF0 1738 aa23.2■■□□□ 1.3
ACTN4-211ENST00000589528 DDX17Q92841 729 aaKnown RBP23.18■■□□□ 1.3
ACTN4-211ENST00000589528 CLTCL1P53675 1640 aa23.18■■□□□ 1.3
ACTN4-211ENST00000589528 NEXMIFQ5QGS0 1516 aa23.17■■□□□ 1.3
ACTN4-211ENST00000589528 PNPLA6Q8IY17 1366 aa23.16■■□□□ 1.3
ACTN4-211ENST00000589528 QTRT2Q9H974 415 aaKnown RBP23.16■■□□□ 1.3
ACTN4-211ENST00000589528 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
ACTN4-211ENST00000589528 RBM6P78332 1123 aaKnown RBP23.13■■□□□ 1.29
ACTN4-211ENST00000589528 NGLY1Q96IV0 654 aa23.12■■□□□ 1.29
ACTN4-211ENST00000589528 C1orf167Q5SNV9 1468 aa23.11■■□□□ 1.29
ACTN4-211ENST00000589528 RGS12O14924 1447 aa23.11■■□□□ 1.29
ACTN4-211ENST00000589528 ADAMTS2O95450 1211 aa23.11■■□□□ 1.29
ACTN4-211ENST00000589528 VGFO15240 615 aaPredicted RBP23.08■■□□□ 1.29
ACTN4-211ENST00000589528 PTCH1Q13635 1447 aa23.08■■□□□ 1.28
ACTN4-211ENST00000589528 LAMC1P11047 1609 aa23.05■■□□□ 1.28
ACTN4-211ENST00000589528 ORAI2Q96SN7 254 aa23.04■■□□□ 1.28
ACTN4-211ENST00000589528 ROBO2Q9HCK4 1378 aa23.03■■□□□ 1.28
ACTN4-211ENST00000589528 USP21Q9UK80 565 aa23.03■■□□□ 1.28
ACTN4-211ENST00000589528 SOS2Q07890 1332 aaPredicted RBP23.02■■□□□ 1.28
ACTN4-211ENST00000589528 ATAD2Q6PL18 1390 aa23.01■■□□□ 1.27
ACTN4-211ENST00000589528 TRPC5Q9UL62 973 aaPredicted RBP23.01■■□□□ 1.27
ACTN4-211ENST00000589528 PPLO60437 1756 aa23■■□□□ 1.27
ACTN4-211ENST00000589528 RPGRIP1LQ68CZ1 1315 aa23■■□□□ 1.27
ACTN4-211ENST00000589528 HFM1A2PYH4 1435 aa22.99■■□□□ 1.27
ACTN4-211ENST00000589528 NAIPQ13075 1403 aa22.99■■□□□ 1.27
ACTN4-211ENST00000589528 FOXD1Q16676 465 aa22.96■■□□□ 1.27
ACTN4-211ENST00000589528 SLC4A1APQ9BWU0 796 aaKnown RBP22.96■■□□□ 1.27
ACTN4-211ENST00000589528 COL22A1Q8NFW1 1626 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms