RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SPHKAPQ2M3C7 1700 aa16.11■□□□□ 0.17
CLPTM1-211ENST00000589347 NOS1P29475 1434 aa16.11■□□□□ 0.17
CLPTM1-211ENST00000589347 STAG3Q9UJ98 1225 aa16.09■□□□□ 0.17
CLPTM1-211ENST00000589347 LTKP29376 864 aa16.05■□□□□ 0.16
CLPTM1-211ENST00000589347 EID1Q9Y6B2 187 aa16.05■□□□□ 0.16
CLPTM1-211ENST00000589347 TMEM131LA2VDJ0 1609 aa16.05■□□□□ 0.16
CLPTM1-211ENST00000589347 TMEM94Q12767 1356 aa16.04■□□□□ 0.16
CLPTM1-211ENST00000589347 SLC52A1Q9NWF4 448 aa16.04■□□□□ 0.16
CLPTM1-211ENST00000589347 NUP155O75694 1391 aa16.03■□□□□ 0.16
CLPTM1-211ENST00000589347 TMEM2Q9UHN6 1383 aa16.03■□□□□ 0.16
CLPTM1-211ENST00000589347 NWD1Q149M9 1564 aa16.03■□□□□ 0.16
CLPTM1-211ENST00000589347 KIF1BO60333 1816 aa16.02■□□□□ 0.16
CLPTM1-211ENST00000589347 NKTRP30414 1462 aaKnown RBP16.01■□□□□ 0.15
CLPTM1-211ENST00000589347 HFM1A2PYH4 1435 aa16.01■□□□□ 0.15
CLPTM1-211ENST00000589347 NAIPQ13075 1403 aa16.01■□□□□ 0.15
CLPTM1-211ENST00000589347 PHLPP1O60346 1717 aa16■□□□□ 0.15
CLPTM1-211ENST00000589347 IDI1Q13907 227 aa16■□□□□ 0.15
CLPTM1-211ENST00000589347 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
CLPTM1-211ENST00000589347 UPF1Q92900 1129 aaKnown RBP eCLIP16■□□□□ 0.15
CLPTM1-211ENST00000589347 COL16A1Q07092 1604 aaPredicted RBP16■□□□□ 0.15
CLPTM1-211ENST00000589347 JCADQ9P266 1359 aa16■□□□□ 0.15
CLPTM1-211ENST00000589347 LRP6O75581 1613 aa15.98■□□□□ 0.15
CLPTM1-211ENST00000589347 TRPM2O94759 1503 aa15.96■□□□□ 0.15
CLPTM1-211ENST00000589347 DIP2AQ14689 1571 aa15.96■□□□□ 0.14
CLPTM1-211ENST00000589347 KCNA6P17658 529 aa15.95■□□□□ 0.14
CLPTM1-211ENST00000589347 RIMS2Q9UQ26 1411 aa15.94■□□□□ 0.14
CLPTM1-211ENST00000589347 CHD2O14647 1828 aaKnown RBP15.94■□□□□ 0.14
CLPTM1-211ENST00000589347 HDGFP51858 240 aaKnown RBP15.94■□□□□ 0.14
CLPTM1-211ENST00000589347 CLTCL1P53675 1640 aa15.94■□□□□ 0.14
CLPTM1-211ENST00000589347 ZFYVE9O95405 1425 aa15.94■□□□□ 0.14
CLPTM1-211ENST00000589347 CDK12Q9NYV4 1490 aaPredicted RBP15.93■□□□□ 0.14
CLPTM1-211ENST00000589347 PPP1R15AO75807 674 aaPredicted RBP15.92■□□□□ 0.14
CLPTM1-211ENST00000589347 CHGAP10645 457 aaKnown RBP15.92■□□□□ 0.14
CLPTM1-211ENST00000589347 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
CLPTM1-211ENST00000589347 MSH6P52701 1360 aa15.91■□□□□ 0.14
CLPTM1-211ENST00000589347 PLEKHG1Q9ULL1 1385 aa15.91■□□□□ 0.14
CLPTM1-211ENST00000589347 SPATA31A6Q5VVP1 1343 aa15.91■□□□□ 0.14
CLPTM1-211ENST00000589347 AHDC1Q5TGY3 1603 aaPredicted RBP15.9■□□□□ 0.14
CLPTM1-211ENST00000589347 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.9■□□□□ 0.14
CLPTM1-211ENST00000589347 BCANQ96GW7 911 aa15.9■□□□□ 0.14
CLPTM1-211ENST00000589347 ZNF772Q68DY9 489 aaPredicted RBP15.89■□□□□ 0.13
CLPTM1-211ENST00000589347 PROSER2Q86WR7 435 aaPredicted RBP15.89■□□□□ 0.13
CLPTM1-211ENST00000589347 TRIM52Q96A61 297 aa15.89■□□□□ 0.13
CLPTM1-211ENST00000589347 RBM33Q96EV2 1170 aaKnown RBP15.88■□□□□ 0.13
CLPTM1-211ENST00000589347 SLAIN2Q9P270 581 aa15.88■□□□□ 0.13
CLPTM1-211ENST00000589347 ACIN1Q9UKV3 1341 aaKnown RBP15.86■□□□□ 0.13
CLPTM1-211ENST00000589347 SLC26A8Q96RN1 970 aa15.85■□□□□ 0.13
CLPTM1-211ENST00000589347 PPLO60437 1756 aa15.85■□□□□ 0.13
CLPTM1-211ENST00000589347 SETBP1Q9Y6X0 1596 aa15.84■□□□□ 0.13
CLPTM1-211ENST00000589347 NCOA3Q9Y6Q9 1424 aa15.84■□□□□ 0.13
CLPTM1-211ENST00000589347 NEXMIFQ5QGS0 1516 aa15.84■□□□□ 0.13
CLPTM1-211ENST00000589347 NRXN3Q9Y4C0 1643 aa15.83■□□□□ 0.13
CLPTM1-211ENST00000589347 ZNF326Q5BKZ1 582 aaKnown RBP15.82■□□□□ 0.12
CLPTM1-211ENST00000589347 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
CLPTM1-211ENST00000589347 PIK3R4Q99570 1358 aa15.8■□□□□ 0.12
CLPTM1-211ENST00000589347 RXRBP28702 533 aa15.8■□□□□ 0.12
CLPTM1-211ENST00000589347 MEX3CQ5U5Q3 659 aaKnown RBP15.8■□□□□ 0.12
CLPTM1-211ENST00000589347 XRN1Q8IZH2 1706 aaKnown RBP15.8■□□□□ 0.12
CLPTM1-211ENST00000589347 IFT172Q9UG01 1749 aa15.8■□□□□ 0.12
CLPTM1-211ENST00000589347 ADAMTS13Q76LX8 1427 aa15.79■□□□□ 0.12
CLPTM1-211ENST00000589347 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.79■□□□□ 0.12
CLPTM1-211ENST00000589347 RGS12O14924 1447 aa15.78■□□□□ 0.12
CLPTM1-211ENST00000589347 SETD5Q9C0A6 1442 aa15.78■□□□□ 0.12
CLPTM1-211ENST00000589347 EP400Q96L91 3159 aa15.78■□□□□ 0.12
CLPTM1-211ENST00000589347 TBX22Q9Y458 520 aa15.78■□□□□ 0.12
CLPTM1-211ENST00000589347 CCDC144AA2RUR9 1427 aa15.77■□□□□ 0.12
CLPTM1-211ENST00000589347 NUTM2DQ5VT03 806 aaPredicted RBP15.77■□□□□ 0.12
CLPTM1-211ENST00000589347 AFF2P51816 1311 aa15.73■□□□□ 0.11
CLPTM1-211ENST00000589347 NHSL1Q5SYE7 1610 aa15.72■□□□□ 0.11
CLPTM1-211ENST00000589347 DCCP43146 1447 aa15.72■□□□□ 0.11
CLPTM1-211ENST00000589347 CADPS2Q86UW7 1296 aa15.72■□□□□ 0.11
CLPTM1-211ENST00000589347 RPGRIP1LQ68CZ1 1315 aa15.71■□□□□ 0.11
CLPTM1-211ENST00000589347 ASXL1Q8IXJ9 1541 aa15.71■□□□□ 0.11
CLPTM1-211ENST00000589347 RAB3GAP2Q9H2M9 1393 aa15.71■□□□□ 0.11
CLPTM1-211ENST00000589347 BRINP3Q76B58 766 aa15.7■□□□□ 0.1
CLPTM1-211ENST00000589347 MPHOSPH9Q99550 1183 aa15.7■□□□□ 0.1
CLPTM1-211ENST00000589347 NALCNQ8IZF0 1738 aa15.69■□□□□ 0.1
CLPTM1-211ENST00000589347 C14orf37Q86TY3 774 aa15.69■□□□□ 0.1
CLPTM1-211ENST00000589347 C19orf44Q9H6X5 657 aa15.69■□□□□ 0.1
CLPTM1-211ENST00000589347 LAMC1P11047 1609 aa15.68■□□□□ 0.1
CLPTM1-211ENST00000589347 VGFO15240 615 aaPredicted RBP15.68■□□□□ 0.1
CLPTM1-211ENST00000589347 KNDC1Q76NI1 1749 aa15.68■□□□□ 0.1
CLPTM1-211ENST00000589347 PTPRUQ92729 1446 aa15.68■□□□□ 0.1
CLPTM1-211ENST00000589347 RBM6P78332 1123 aaKnown RBP15.67■□□□□ 0.1
CLPTM1-211ENST00000589347 FOXD1Q16676 465 aa15.67■□□□□ 0.1
CLPTM1-211ENST00000589347 ATF3P18847 181 aa15.66■□□□□ 0.1
CLPTM1-211ENST00000589347 AMOTL2Q9Y2J4 779 aa15.66■□□□□ 0.1
CLPTM1-211ENST00000589347 PTCH1Q13635 1447 aa15.66■□□□□ 0.1
CLPTM1-211ENST00000589347 ATAD2Q6PL18 1390 aa15.65■□□□□ 0.1
CLPTM1-211ENST00000589347 NUTM2BA6NNL0 878 aaPredicted RBP15.65■□□□□ 0.1
CLPTM1-211ENST00000589347 NUTM2EB1AL46 878 aaPredicted RBP15.65■□□□□ 0.1
CLPTM1-211ENST00000589347 NUTM2AQ8IVF1 878 aaPredicted RBP15.65■□□□□ 0.1
CLPTM1-211ENST00000589347 MST1RQ04912 1400 aa15.65■□□□□ 0.1
CLPTM1-211ENST00000589347 SPATA31E1Q6ZUB1 1445 aa15.65■□□□□ 0.1
CLPTM1-211ENST00000589347 PNPLA6Q8IY17 1366 aa15.64■□□□□ 0.09
CLPTM1-211ENST00000589347 ANKRD30BQ9BXX2 1392 aa15.64■□□□□ 0.09
CLPTM1-211ENST00000589347 METP08581 1390 aa15.63■□□□□ 0.09
CLPTM1-211ENST00000589347 PRAG1Q86YV5 1406 aa15.63■□□□□ 0.09
CLPTM1-211ENST00000589347 QTRT2Q9H974 415 aaKnown RBP15.62■□□□□ 0.09
CLPTM1-211ENST00000589347 ADGRL3Q9HAR2 1447 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms