RNA–Protein interactions for RNA: ENST00000589096.1

CCDC130-210, Transcript of coiled-coil domain containing 130, humanhuman

Gene CCDC130, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-210ENST00000589096 RIMS2Q9UQ26 1411 aa28.53■■■□□ 2.16
CCDC130-210ENST00000589096 PLEKHG1Q9ULL1 1385 aa28.53■■■□□ 2.16
CCDC130-210ENST00000589096 XIRP1Q702N8 1843 aaKnown RBP28.53■■■□□ 2.16
CCDC130-210ENST00000589096 HDGFP51858 240 aaKnown RBP28.53■■■□□ 2.16
CCDC130-210ENST00000589096 TMEM94Q12767 1356 aa28.51■■■□□ 2.16
CCDC130-210ENST00000589096 RRBP1Q9P2E9 1410 aaKnown RBP28.51■■■□□ 2.15
CCDC130-210ENST00000589096 NWD1Q149M9 1564 aa28.5■■■□□ 2.15
CCDC130-210ENST00000589096 BCANQ96GW7 911 aa28.5■■■□□ 2.15
CCDC130-210ENST00000589096 NKTRP30414 1462 aaKnown RBP28.5■■■□□ 2.15
CCDC130-210ENST00000589096 MYO5BQ9ULV0 1848 aa28.5■■■□□ 2.15
CCDC130-210ENST00000589096 SOCS7O14512 581 aa28.49■■■□□ 2.15
CCDC130-210ENST00000589096 PPP1R15AO75807 674 aaPredicted RBP28.49■■■□□ 2.15
CCDC130-210ENST00000589096 MED1Q15648 1581 aaPredicted RBP28.49■■■□□ 2.15
CCDC130-210ENST00000589096 CHGAP10645 457 aaKnown RBP28.47■■■□□ 2.15
CCDC130-210ENST00000589096 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.47■■■□□ 2.15
CCDC130-210ENST00000589096 PROSER2Q86WR7 435 aaPredicted RBP28.45■■■□□ 2.14
CCDC130-210ENST00000589096 FAM135BQ49AJ0 1406 aa28.42■■■□□ 2.14
CCDC130-210ENST00000589096 SENP3Q9H4L4 574 aaPredicted RBP28.41■■■□□ 2.14
CCDC130-210ENST00000589096 TBX22Q9Y458 520 aa28.41■■■□□ 2.14
CCDC130-210ENST00000589096 RBM33Q96EV2 1170 aaKnown RBP28.39■■■□□ 2.14
CCDC130-210ENST00000589096 NAIPQ13075 1403 aa28.37■■■□□ 2.13
CCDC130-210ENST00000589096 ADAMTS13Q76LX8 1427 aa28.37■■■□□ 2.13
CCDC130-210ENST00000589096 CHD2O14647 1828 aaKnown RBP28.37■■■□□ 2.13
CCDC130-210ENST00000589096 NUTM2DQ5VT03 806 aaPredicted RBP28.36■■■□□ 2.13
CCDC130-210ENST00000589096 DIP2AQ14689 1571 aa28.36■■■□□ 2.13
CCDC130-210ENST00000589096 MSH6P52701 1360 aa28.35■■■□□ 2.13
CCDC130-210ENST00000589096 SPHKAPQ2M3C7 1700 aa28.34■■■□□ 2.13
CCDC130-210ENST00000589096 PIK3R4Q99570 1358 aa28.34■■■□□ 2.13
CCDC130-210ENST00000589096 NCOA3Q9Y6Q9 1424 aa28.31■■■□□ 2.12
CCDC130-210ENST00000589096 PHF23Q9BUL5 403 aaPredicted RBP28.29■■■□□ 2.12
CCDC130-210ENST00000589096 ROBO1Q9Y6N7 1651 aa28.29■■■□□ 2.12
CCDC130-210ENST00000589096 HFM1A2PYH4 1435 aa28.28■■■□□ 2.12
CCDC130-210ENST00000589096 TRPM2O94759 1503 aa28.26■■■□□ 2.11
CCDC130-210ENST00000589096 SLAIN2Q9P270 581 aa28.24■■■□□ 2.11
CCDC130-210ENST00000589096 ZNF326Q5BKZ1 582 aaKnown RBP28.23■■■□□ 2.11
CCDC130-210ENST00000589096 SETBP1Q9Y6X0 1596 aa28.23■■■□□ 2.11
CCDC130-210ENST00000589096 CLTCL1P53675 1640 aa28.22■■■□□ 2.11
CCDC130-210ENST00000589096 NRXN3Q9Y4C0 1643 aa28.21■■■□□ 2.11
CCDC130-210ENST00000589096 PTPRUQ92729 1446 aa28.2■■■□□ 2.11
CCDC130-210ENST00000589096 AMOTL2Q9Y2J4 779 aa28.2■■■□□ 2.1
CCDC130-210ENST00000589096 C14orf37Q86TY3 774 aa28.19■■■□□ 2.1
CCDC130-210ENST00000589096 TRIM52Q96A61 297 aa28.17■■■□□ 2.1
CCDC130-210ENST00000589096 C19orf44Q9H6X5 657 aa28.17■■■□□ 2.1
CCDC130-210ENST00000589096 NEXMIFQ5QGS0 1516 aa28.17■■■□□ 2.1
CCDC130-210ENST00000589096 CADPS2Q86UW7 1296 aa28.15■■■□□ 2.1
CCDC130-210ENST00000589096 XRN1Q8IZH2 1706 aaKnown RBP28.13■■■□□ 2.09
CCDC130-210ENST00000589096 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.12■■■□□ 2.09
CCDC130-210ENST00000589096 ATF3P18847 181 aa28.12■■■□□ 2.09
CCDC130-210ENST00000589096 SLC4A1APQ9BWU0 796 aaKnown RBP28.12■■■□□ 2.09
CCDC130-210ENST00000589096 METP08581 1390 aa28.11■■■□□ 2.09
CCDC130-210ENST00000589096 KIF1BO60333 1816 aa28.11■■■□□ 2.09
CCDC130-210ENST00000589096 PHLPP1O60346 1717 aa28.09■■■□□ 2.09
CCDC130-210ENST00000589096 RGS17Q9UGC6 210 aaPredicted RBP28.09■■■□□ 2.09
CCDC130-210ENST00000589096 DCCP43146 1447 aa28.09■■■□□ 2.09
CCDC130-210ENST00000589096 JCADQ9P266 1359 aa28.07■■■□□ 2.08
CCDC130-210ENST00000589096 COL16A1Q07092 1604 aaPredicted RBP28.05■■■□□ 2.08
CCDC130-210ENST00000589096 VGFO15240 615 aaPredicted RBP28.04■■■□□ 2.08
CCDC130-210ENST00000589096 RPGRIP1LQ68CZ1 1315 aa28.03■■■□□ 2.08
CCDC130-210ENST00000589096 AHDC1Q5TGY3 1603 aaPredicted RBP28.03■■■□□ 2.08
CCDC130-210ENST00000589096 BRINP3Q76B58 766 aa27.99■■■□□ 2.07
CCDC130-210ENST00000589096 ADGRL3Q9HAR2 1447 aa27.98■■■□□ 2.07
CCDC130-210ENST00000589096 MST1RQ04912 1400 aa27.97■■■□□ 2.07
CCDC130-210ENST00000589096 FOXD1Q16676 465 aa27.96■■■□□ 2.07
CCDC130-210ENST00000589096 PTCH1Q13635 1447 aa27.95■■■□□ 2.07
CCDC130-210ENST00000589096 SETD1AO15047 1707 aaKnown RBP27.95■■■□□ 2.06
CCDC130-210ENST00000589096 SPATA31A6Q5VVP1 1343 aa27.94■■■□□ 2.06
CCDC130-210ENST00000589096 CCDC144AA2RUR9 1427 aa27.93■■■□□ 2.06
CCDC130-210ENST00000589096 PRAG1Q86YV5 1406 aa27.93■■■□□ 2.06
CCDC130-210ENST00000589096 ASXL1Q8IXJ9 1541 aa27.93■■■□□ 2.06
CCDC130-210ENST00000589096 PPLO60437 1756 aa27.92■■■□□ 2.06
CCDC130-210ENST00000589096 POTEAQ6S8J7 498 aa27.92■■■□□ 2.06
CCDC130-210ENST00000589096 MPHOSPH9Q99550 1183 aa27.92■■■□□ 2.06
CCDC130-210ENST00000589096 NALCNQ8IZF0 1738 aa27.9■■■□□ 2.06
CCDC130-210ENST00000589096 SHPRHQ149N8 1683 aa27.89■■■□□ 2.06
CCDC130-210ENST00000589096 ACIN1Q9UKV3 1341 aaKnown RBP27.89■■■□□ 2.05
CCDC130-210ENST00000589096 LRP6O75581 1613 aa27.89■■■□□ 2.05
CCDC130-210ENST00000589096 ROBO2Q9HCK4 1378 aa27.88■■■□□ 2.05
CCDC130-210ENST00000589096 SPATA31E1Q6ZUB1 1445 aa27.87■■■□□ 2.05
CCDC130-210ENST00000589096 SETD5Q9C0A6 1442 aa27.85■■■□□ 2.05
CCDC130-210ENST00000589096 NHSL1Q5SYE7 1610 aa27.85■■■□□ 2.05
CCDC130-210ENST00000589096 ANKRD30BQ9BXX2 1392 aa27.83■■■□□ 2.05
CCDC130-210ENST00000589096 ADGRF5Q8IZF2 1346 aa27.82■■■□□ 2.04
CCDC130-210ENST00000589096 C1orf167Q5SNV9 1468 aa27.82■■■□□ 2.04
CCDC130-210ENST00000589096 RGL3Q3MIN7 710 aa27.81■■■□□ 2.04
CCDC130-210ENST00000589096 MEX3CQ5U5Q3 659 aaKnown RBP27.81■■■□□ 2.04
CCDC130-210ENST00000589096 LRRC59Q96AG4 307 aaKnown RBP27.79■■■□□ 2.04
CCDC130-210ENST00000589096 IFT172Q9UG01 1749 aa27.77■■■□□ 2.04
CCDC130-210ENST00000589096 ZNF772Q68DY9 489 aaPredicted RBP27.76■■■□□ 2.03
CCDC130-210ENST00000589096 DDX17Q92841 729 aaKnown RBP27.75■■■□□ 2.03
CCDC130-210ENST00000589096 PIK3C2GO75747 1445 aa27.75■■■□□ 2.03
CCDC130-210ENST00000589096 TECPR2O15040 1411 aa27.74■■■□□ 2.03
CCDC130-210ENST00000589096 LAMC1P11047 1609 aa27.73■■■□□ 2.03
CCDC130-210ENST00000589096 NUTM2BA6NNL0 878 aaPredicted RBP27.72■■■□□ 2.03
CCDC130-210ENST00000589096 NUTM2EB1AL46 878 aaPredicted RBP27.72■■■□□ 2.03
CCDC130-210ENST00000589096 NUTM2AQ8IVF1 878 aaPredicted RBP27.72■■■□□ 2.03
CCDC130-210ENST00000589096 LRPPRCP42704 1394 aaKnown RBP27.72■■■□□ 2.03
CCDC130-210ENST00000589096 PNPLA6Q8IY17 1366 aa27.72■■■□□ 2.03
CCDC130-210ENST00000589096 RAB3GAP2Q9H2M9 1393 aa27.72■■■□□ 2.03
CCDC130-210ENST00000589096 ORAI2Q96SN7 254 aa27.71■■■□□ 2.03
CCDC130-210ENST00000589096 CDC42BPGQ6DT37 1551 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms