RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 RIMS2Q9UQ26 1411 aa21.21■□□□□ 0.99
CNN1-208ENST00000588935 HDGFP51858 240 aaKnown RBP21.19■□□□□ 0.98
CNN1-208ENST00000588935 KDM5AP29375 1690 aaKnown RBP21.18■□□□□ 0.98
CNN1-208ENST00000588935 KDM2AQ9Y2K7 1162 aa21.18■□□□□ 0.98
CNN1-208ENST00000588935 STRCQ7RTU9 1775 aa21.18■□□□□ 0.98
CNN1-208ENST00000588935 ARHGAP23Q9P227 1491 aa21.16■□□□□ 0.98
CNN1-208ENST00000588935 SPATA31E1Q6ZUB1 1445 aa21.16■□□□□ 0.98
CNN1-208ENST00000588935 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.16■□□□□ 0.98
CNN1-208ENST00000588935 SLIT1O75093 1534 aa21.15■□□□□ 0.98
CNN1-208ENST00000588935 SCAF11Q99590 1463 aaKnown RBP21.14■□□□□ 0.98
CNN1-208ENST00000588935 DCAF11Q8TEB1 546 aa21.14■□□□□ 0.97
CNN1-208ENST00000588935 ZFYVE9O95405 1425 aa21.13■□□□□ 0.97
CNN1-208ENST00000588935 POLR1AO95602 1720 aaPredicted RBP21.13■□□□□ 0.97
CNN1-208ENST00000588935 RPGRIP1LQ68CZ1 1315 aa21.13■□□□□ 0.97
CNN1-208ENST00000588935 VGFO15240 615 aaPredicted RBP21.11■□□□□ 0.97
CNN1-208ENST00000588935 SLC26A8Q96RN1 970 aa21.11■□□□□ 0.97
CNN1-208ENST00000588935 NPHP4O75161 1426 aaPredicted RBP21.11■□□□□ 0.97
CNN1-208ENST00000588935 NEXMIFQ5QGS0 1516 aa21.1■□□□□ 0.97
CNN1-208ENST00000588935 DMRT2Q9Y5R5 561 aa21.1■□□□□ 0.97
CNN1-208ENST00000588935 ADGRF5Q8IZF2 1346 aa21.09■□□□□ 0.97
CNN1-208ENST00000588935 L3MBTL2Q969R5 705 aa21.09■□□□□ 0.97
CNN1-208ENST00000588935 PPLO60437 1756 aa21.09■□□□□ 0.97
CNN1-208ENST00000588935 NEURL4Q96JN8 1562 aa21.08■□□□□ 0.97
CNN1-208ENST00000588935 PLEKHG1Q9ULL1 1385 aa21.05■□□□□ 0.96
CNN1-208ENST00000588935 IQGAP1P46940 1657 aa21.05■□□□□ 0.96
CNN1-208ENST00000588935 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
CNN1-208ENST00000588935 MED14O60244 1454 aa21.03■□□□□ 0.96
CNN1-208ENST00000588935 IFT172Q9UG01 1749 aa21.03■□□□□ 0.96
CNN1-208ENST00000588935 CLSPNQ9HAW4 1339 aa21.03■□□□□ 0.96
CNN1-208ENST00000588935 CFAP70Q5T0N1 1121 aa20.98■□□□□ 0.95
CNN1-208ENST00000588935 TBX22Q9Y458 520 aa20.98■□□□□ 0.95
CNN1-208ENST00000588935 ZNF335Q9H4Z2 1342 aaPredicted RBP20.98■□□□□ 0.95
CNN1-208ENST00000588935 ADAMTS13Q76LX8 1427 aa20.97■□□□□ 0.95
CNN1-208ENST00000588935 TMEM132EQ6IEE7 984 aa20.96■□□□□ 0.95
CNN1-208ENST00000588935 MYOM2P54296 1465 aa20.94■□□□□ 0.94
CNN1-208ENST00000588935 NRXN3Q9Y4C0 1643 aa20.94■□□□□ 0.94
CNN1-208ENST00000588935 STAC3Q96MF2 364 aa20.94■□□□□ 0.94
CNN1-208ENST00000588935 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
CNN1-208ENST00000588935 C14orf93Q9H972 538 aaKnown RBP20.93■□□□□ 0.94
CNN1-208ENST00000588935 METP08581 1390 aa20.93■□□□□ 0.94
CNN1-208ENST00000588935 SETBP1Q9Y6X0 1596 aa20.93■□□□□ 0.94
CNN1-208ENST00000588935 STK26Q9P289 416 aa20.92■□□□□ 0.94
CNN1-208ENST00000588935 PIK3C2GO75747 1445 aa20.92■□□□□ 0.94
CNN1-208ENST00000588935 NBPF8Q3BBV2 869 aa20.91■□□□□ 0.94
CNN1-208ENST00000588935 KCNA6P17658 529 aa20.9■□□□□ 0.94
CNN1-208ENST00000588935 AMOTL2Q9Y2J4 779 aa20.9■□□□□ 0.94
CNN1-208ENST00000588935 NRXN1Q9ULB1 1477 aa20.89■□□□□ 0.94
CNN1-208ENST00000588935 NBPF1Q3BBV0 1214 aa20.89■□□□□ 0.93
CNN1-208ENST00000588935 RBM33Q96EV2 1170 aaKnown RBP20.89■□□□□ 0.93
CNN1-208ENST00000588935 PRAG1Q86YV5 1406 aa20.88■□□□□ 0.93
CNN1-208ENST00000588935 STRCP1A6NGW2 1772 aa20.87■□□□□ 0.93
CNN1-208ENST00000588935 PTPRUQ92729 1446 aa20.87■□□□□ 0.93
CNN1-208ENST00000588935 DIP2AQ14689 1571 aa20.86■□□□□ 0.93
CNN1-208ENST00000588935 CHD2O14647 1828 aaKnown RBP20.86■□□□□ 0.93
CNN1-208ENST00000588935 PROSER2Q86WR7 435 aaPredicted RBP20.86■□□□□ 0.93
CNN1-208ENST00000588935 TIMELESSQ9UNS1 1208 aa20.86■□□□□ 0.93
CNN1-208ENST00000588935 SETD1AO15047 1707 aaKnown RBP20.85■□□□□ 0.93
CNN1-208ENST00000588935 PIK3R4Q99570 1358 aa20.83■□□□□ 0.92
CNN1-208ENST00000588935 TRAK1Q9UPV9 953 aa20.82■□□□□ 0.92
CNN1-208ENST00000588935 ASXL1Q8IXJ9 1541 aa20.8■□□□□ 0.92
CNN1-208ENST00000588935 LAMC1P11047 1609 aa20.79■□□□□ 0.92
CNN1-208ENST00000588935 LTBP4Q8N2S1 1624 aa20.79■□□□□ 0.92
CNN1-208ENST00000588935 C14orf37Q86TY3 774 aa20.79■□□□□ 0.92
CNN1-208ENST00000588935 YTHDC2Q9H6S0 1430 aaKnown RBP20.78■□□□□ 0.92
CNN1-208ENST00000588935 ROCK2O75116 1388 aaKnown RBP20.78■□□□□ 0.92
CNN1-208ENST00000588935 LRPPRCP42704 1394 aaKnown RBP20.78■□□□□ 0.92
CNN1-208ENST00000588935 WAPLQ7Z5K2 1190 aa20.78■□□□□ 0.92
CNN1-208ENST00000588935 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.92
CNN1-208ENST00000588935 TRPM1Q7Z4N2 1603 aa20.77■□□□□ 0.92
CNN1-208ENST00000588935 KIAA1210Q9ULL0 1709 aa20.76■□□□□ 0.91
CNN1-208ENST00000588935 CERKQ8TCT0 537 aa20.76■□□□□ 0.91
CNN1-208ENST00000588935 CARD11Q9BXL7 1154 aa20.75■□□□□ 0.91
CNN1-208ENST00000588935 POGKQ9P215 609 aa20.75■□□□□ 0.91
CNN1-208ENST00000588935 ADGRB1O14514 1584 aa20.75■□□□□ 0.91
CNN1-208ENST00000588935 NWD1Q149M9 1564 aa20.75■□□□□ 0.91
CNN1-208ENST00000588935 TMEM94Q12767 1356 aa20.74■□□□□ 0.91
CNN1-208ENST00000588935 ROBO2Q9HCK4 1378 aa20.74■□□□□ 0.91
CNN1-208ENST00000588935 CPS1P31327 1500 aa20.74■□□□□ 0.91
CNN1-208ENST00000588935 LRRC7Q96NW7 1537 aa20.74■□□□□ 0.91
CNN1-208ENST00000588935 XRN1Q8IZH2 1706 aaKnown RBP20.74■□□□□ 0.91
CNN1-208ENST00000588935 ABCC11Q96J66 1382 aa20.73■□□□□ 0.91
CNN1-208ENST00000588935 PRAM1Q96QH2 718 aa20.73■□□□□ 0.91
CNN1-208ENST00000588935 PLEKHH1Q9ULM0 1364 aa20.72■□□□□ 0.91
CNN1-208ENST00000588935 NKTRP30414 1462 aaKnown RBP20.71■□□□□ 0.91
CNN1-208ENST00000588935 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
CNN1-208ENST00000588935 RALGAPBQ86X10 1494 aa20.69■□□□□ 0.9
CNN1-208ENST00000588935 MINK1Q8N4C8 1332 aaPredicted RBP20.67■□□□□ 0.9
CNN1-208ENST00000588935 SIRT1Q96EB6 747 aa20.66■□□□□ 0.9
CNN1-208ENST00000588935 HIRIP3Q9BW71 556 aaPredicted RBP20.66■□□□□ 0.9
CNN1-208ENST00000588935 KNDC1Q76NI1 1749 aa20.66■□□□□ 0.9
CNN1-208ENST00000588935 TECPR2O15040 1411 aa20.65■□□□□ 0.9
CNN1-208ENST00000588935 PTCH1Q13635 1447 aa20.65■□□□□ 0.9
CNN1-208ENST00000588935 MSH6P52701 1360 aa20.63■□□□□ 0.89
CNN1-208ENST00000588935 GPRASP1Q5JY77 1395 aa20.63■□□□□ 0.89
CNN1-208ENST00000588935 UBAP1LF5GYI3 381 aa20.63■□□□□ 0.89
CNN1-208ENST00000588935 C19orf44Q9H6X5 657 aa20.63■□□□□ 0.89
CNN1-208ENST00000588935 ARHGEF28Q8N1W1 1705 aaKnown RBP20.63■□□□□ 0.89
CNN1-208ENST00000588935 DLC1Q96QB1 1528 aa20.63■□□□□ 0.89
CNN1-208ENST00000588935 FAM135BQ49AJ0 1406 aa20.62■□□□□ 0.89
CNN1-208ENST00000588935 NUTM2FA1L443 756 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms