RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 ZNF142P52746 1687 aaPredicted RBP32.39■■■□□ 2.78
ACTN4-210ENST00000588618 CEP170BQ9Y4F5 1589 aaPredicted RBP32.39■■■□□ 2.78
ACTN4-210ENST00000588618 STAC3Q96MF2 364 aa32.37■■■□□ 2.77
ACTN4-210ENST00000588618 MYOM2P54296 1465 aa32.37■■■□□ 2.77
ACTN4-210ENST00000588618 PRAG1Q86YV5 1406 aa32.37■■■□□ 2.77
ACTN4-210ENST00000588618 THEMISQ8N1K5 641 aaPredicted RBP32.33■■■□□ 2.77
ACTN4-210ENST00000588618 NRXN1Q9ULB1 1477 aa32.32■■■□□ 2.76
ACTN4-210ENST00000588618 ZFYVE9O95405 1425 aa32.32■■■□□ 2.76
ACTN4-210ENST00000588618 ADGRF5Q8IZF2 1346 aa32.32■■■□□ 2.76
ACTN4-210ENST00000588618 HDGFP51858 240 aaKnown RBP32.31■■■□□ 2.76
ACTN4-210ENST00000588618 TRPM1Q7Z4N2 1603 aa32.31■■■□□ 2.76
ACTN4-210ENST00000588618 NUTM2DQ5VT03 806 aaPredicted RBP32.31■■■□□ 2.76
ACTN4-210ENST00000588618 VGFO15240 615 aaPredicted RBP32.29■■■□□ 2.76
ACTN4-210ENST00000588618 RIMS2Q9UQ26 1411 aa32.29■■■□□ 2.76
ACTN4-210ENST00000588618 TMEM2Q9UHN6 1383 aa32.27■■■□□ 2.76
ACTN4-210ENST00000588618 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.26■■■□□ 2.76
ACTN4-210ENST00000588618 SLIT1O75093 1534 aa32.25■■■□□ 2.75
ACTN4-210ENST00000588618 RALGAPBQ86X10 1494 aa32.25■■■□□ 2.75
ACTN4-210ENST00000588618 ARHGAP23Q9P227 1491 aa32.25■■■□□ 2.75
ACTN4-210ENST00000588618 PIK3C2GO75747 1445 aa32.24■■■□□ 2.75
ACTN4-210ENST00000588618 EID1Q9Y6B2 187 aa32.23■■■□□ 2.75
ACTN4-210ENST00000588618 KIAA1210Q9ULL0 1709 aa32.2■■■□□ 2.75
ACTN4-210ENST00000588618 TXNDC2Q86VQ3 553 aa32.17■■■□□ 2.74
ACTN4-210ENST00000588618 LTKP29376 864 aa32.16■■■□□ 2.74
ACTN4-210ENST00000588618 NBPF1Q3BBV0 1214 aa32.16■■■□□ 2.74
ACTN4-210ENST00000588618 SENP3Q9H4L4 574 aaPredicted RBP32.15■■■□□ 2.74
ACTN4-210ENST00000588618 NRXN3Q9Y4C0 1643 aa32.15■■■□□ 2.74
ACTN4-210ENST00000588618 CFAP70Q5T0N1 1121 aa32.13■■■□□ 2.73
ACTN4-210ENST00000588618 IQGAP1P46940 1657 aa32.13■■■□□ 2.73
ACTN4-210ENST00000588618 BCANQ96GW7 911 aa32.12■■■□□ 2.73
ACTN4-210ENST00000588618 ROCK2O75116 1388 aaKnown RBP32.11■■■□□ 2.73
ACTN4-210ENST00000588618 GPRASP1Q5JY77 1395 aa32.11■■■□□ 2.73
ACTN4-210ENST00000588618 ANKLE2Q86XL3 938 aa32.11■■■□□ 2.73
ACTN4-210ENST00000588618 SETD1AO15047 1707 aaKnown RBP32.11■■■□□ 2.73
ACTN4-210ENST00000588618 LAMC1P11047 1609 aa32.09■■■□□ 2.73
ACTN4-210ENST00000588618 SCAF11Q99590 1463 aaKnown RBP32.09■■■□□ 2.73
ACTN4-210ENST00000588618 SETBP1Q9Y6X0 1596 aa32.09■■■□□ 2.73
ACTN4-210ENST00000588618 C14orf93Q9H972 538 aaKnown RBP32.09■■■□□ 2.73
ACTN4-210ENST00000588618 LMTK3Q96Q04 1460 aa32.08■■■□□ 2.73
ACTN4-210ENST00000588618 ALKQ9UM73 1620 aa32.08■■■□□ 2.73
ACTN4-210ENST00000588618 ASXL1Q8IXJ9 1541 aa32.07■■■□□ 2.72
ACTN4-210ENST00000588618 ADGRB1O14514 1584 aa32.07■■■□□ 2.72
ACTN4-210ENST00000588618 PLEKHG1Q9ULL1 1385 aa32.05■■■□□ 2.72
ACTN4-210ENST00000588618 POLR1AO95602 1720 aaPredicted RBP32.04■■■□□ 2.72
ACTN4-210ENST00000588618 CARD11Q9BXL7 1154 aa32.03■■■□□ 2.72
ACTN4-210ENST00000588618 ADAMTS13Q76LX8 1427 aa32■■■□□ 2.71
ACTN4-210ENST00000588618 HSPA2P54652 639 aa32■■■□□ 2.71
ACTN4-210ENST00000588618 TMEM132EQ6IEE7 984 aa31.98■■■□□ 2.71
ACTN4-210ENST00000588618 USP47Q96K76 1375 aa31.97■■■□□ 2.71
ACTN4-210ENST00000588618 HIRIP3Q9BW71 556 aaPredicted RBP31.97■■■□□ 2.71
ACTN4-210ENST00000588618 MED14O60244 1454 aa31.96■■■□□ 2.71
ACTN4-210ENST00000588618 HSPA5P11021 654 aaKnown RBP31.95■■■□□ 2.7
ACTN4-210ENST00000588618 NCKAP5LQ9HCH0 1330 aa31.93■■■□□ 2.7
ACTN4-210ENST00000588618 EIF4G2P78344 907 aaKnown RBP eCLIP31.92■■■□□ 2.7
ACTN4-210ENST00000588618 METP08581 1390 aa31.91■■■□□ 2.7
ACTN4-210ENST00000588618 NPHP4O75161 1426 aaPredicted RBP31.9■■■□□ 2.7
ACTN4-210ENST00000588618 SLC26A8Q96RN1 970 aa31.9■■■□□ 2.7
ACTN4-210ENST00000588618 AEBP2Q6ZN18 517 aaPredicted RBP31.89■■■□□ 2.69
ACTN4-210ENST00000588618 DIP2AQ14689 1571 aa31.88■■■□□ 2.69
ACTN4-210ENST00000588618 STRCQ7RTU9 1775 aa31.88■■■□□ 2.69
ACTN4-210ENST00000588618 ARHGEF28Q8N1W1 1705 aaKnown RBP31.87■■■□□ 2.69
ACTN4-210ENST00000588618 TBX22Q9Y458 520 aa31.86■■■□□ 2.69
ACTN4-210ENST00000588618 YTHDC2Q9H6S0 1430 aaKnown RBP31.86■■■□□ 2.69
ACTN4-210ENST00000588618 EIF3AQ14152 1382 aaKnown RBP31.84■■■□□ 2.69
ACTN4-210ENST00000588618 ST20-MTHFSA0A0A6YYL1 179 aa31.83■■■□□ 2.69
ACTN4-210ENST00000588618 ZNF316A6NFI3 1004 aaPredicted RBP31.83■■■□□ 2.69
ACTN4-210ENST00000588618 TRAK1Q9UPV9 953 aa31.82■■■□□ 2.68
ACTN4-210ENST00000588618 STK26Q9P289 416 aa31.81■■■□□ 2.68
ACTN4-210ENST00000588618 PTPRUQ92729 1446 aa31.8■■■□□ 2.68
ACTN4-210ENST00000588618 KNDC1Q76NI1 1749 aa31.8■■■□□ 2.68
ACTN4-210ENST00000588618 LRPPRCP42704 1394 aaKnown RBP31.79■■■□□ 2.68
ACTN4-210ENST00000588618 PIK3R4Q99570 1358 aa31.75■■■□□ 2.67
ACTN4-210ENST00000588618 QRICH2Q9H0J4 1663 aa31.74■■■□□ 2.67
ACTN4-210ENST00000588618 CHD2O14647 1828 aaKnown RBP31.74■■■□□ 2.67
ACTN4-210ENST00000588618 ABCC11Q96J66 1382 aa31.74■■■□□ 2.67
ACTN4-210ENST00000588618 DLC1Q96QB1 1528 aa31.74■■■□□ 2.67
ACTN4-210ENST00000588618 TESK2Q96S53 571 aa31.74■■■□□ 2.67
ACTN4-210ENST00000588618 XRN1Q8IZH2 1706 aaKnown RBP31.74■■■□□ 2.67
ACTN4-210ENST00000588618 TECPR2O15040 1411 aa31.73■■■□□ 2.67
ACTN4-210ENST00000588618 CPS1P31327 1500 aa31.73■■■□□ 2.67
ACTN4-210ENST00000588618 C11orf95C9JLR9 678 aaPredicted RBP31.71■■■□□ 2.67
ACTN4-210ENST00000588618 DMRT2Q9Y5R5 561 aa31.7■■■□□ 2.67
ACTN4-210ENST00000588618 AMOTL2Q9Y2J4 779 aa31.69■■■□□ 2.66
ACTN4-210ENST00000588618 POGKQ9P215 609 aa31.68■■■□□ 2.66
ACTN4-210ENST00000588618 CENPJQ9HC77 1338 aaPredicted RBP31.68■■■□□ 2.66
ACTN4-210ENST00000588618 ROBO2Q9HCK4 1378 aa31.66■■■□□ 2.66
ACTN4-210ENST00000588618 PLEKHH1Q9ULM0 1364 aa31.66■■■□□ 2.66
ACTN4-210ENST00000588618 PRAM1Q96QH2 718 aa31.65■■■□□ 2.66
ACTN4-210ENST00000588618 WAPLQ7Z5K2 1190 aa31.63■■■□□ 2.65
ACTN4-210ENST00000588618 DISP3Q9P2K9 1392 aa31.62■■■□□ 2.65
ACTN4-210ENST00000588618 SBNO2Q9Y2G9 1366 aa31.62■■■□□ 2.65
ACTN4-210ENST00000588618 WASHC2AQ641Q2 1341 aa31.62■■■□□ 2.65
ACTN4-210ENST00000588618 SAFB2Q14151 953 aaKnown RBP eCLIP31.62■■■□□ 2.652e-6■■□□□ 14.4
ACTN4-210ENST00000588618 NWD1Q149M9 1564 aa31.62■■■□□ 2.65
ACTN4-210ENST00000588618 SLC24A1O60721 1099 aa31.61■■■□□ 2.65
ACTN4-210ENST00000588618 FAM135BQ49AJ0 1406 aa31.61■■■□□ 2.65
ACTN4-210ENST00000588618 STRCP1A6NGW2 1772 aa31.61■■■□□ 2.65
ACTN4-210ENST00000588618 SIRT1Q96EB6 747 aa31.61■■■□□ 2.65
ACTN4-210ENST00000588618 PTCH1Q13635 1447 aa31.6■■■□□ 2.65
ACTN4-210ENST00000588618 KCNA6P17658 529 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms