RNA–Protein interactions for RNA: ENST00000588599.5

SNRPD2-207, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-207ENST00000588599 MYO5BQ9ULV0 1848 aa17.44■□□□□ 0.38
SNRPD2-207ENST00000588599 HDGFP51858 240 aaKnown RBP17.41■□□□□ 0.38
SNRPD2-207ENST00000588599 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
SNRPD2-207ENST00000588599 RPRD2Q5VT52 1461 aaKnown RBP17.41■□□□□ 0.38
SNRPD2-207ENST00000588599 ROBO1Q9Y6N7 1651 aa17.41■□□□□ 0.38
SNRPD2-207ENST00000588599 POTEAQ6S8J7 498 aa17.4■□□□□ 0.38
SNRPD2-207ENST00000588599 CHD2O14647 1828 aaKnown RBP17.4■□□□□ 0.38
SNRPD2-207ENST00000588599 ZFYVE9O95405 1425 aa17.39■□□□□ 0.38
SNRPD2-207ENST00000588599 CHGAP10645 457 aaKnown RBP17.39■□□□□ 0.37
SNRPD2-207ENST00000588599 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
SNRPD2-207ENST00000588599 NWD1Q149M9 1564 aa17.38■□□□□ 0.37
SNRPD2-207ENST00000588599 PPP1R15AO75807 674 aaPredicted RBP17.38■□□□□ 0.37
SNRPD2-207ENST00000588599 NUTM2DQ5VT03 806 aaPredicted RBP17.38■□□□□ 0.37
SNRPD2-207ENST00000588599 TBX22Q9Y458 520 aa17.38■□□□□ 0.37
SNRPD2-207ENST00000588599 MSH6P52701 1360 aa17.38■□□□□ 0.37
SNRPD2-207ENST00000588599 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
SNRPD2-207ENST00000588599 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
SNRPD2-207ENST00000588599 TMEM131LA2VDJ0 1609 aa17.37■□□□□ 0.37
SNRPD2-207ENST00000588599 GCC2Q8IWJ2 1684 aa17.36■□□□□ 0.37
SNRPD2-207ENST00000588599 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNRPD2-207ENST00000588599 E9PCH4 1651 aa17.32■□□□□ 0.36
SNRPD2-207ENST00000588599 UNC13BO14795 1591 aa17.32■□□□□ 0.36
SNRPD2-207ENST00000588599 ADAMTS13Q76LX8 1427 aa17.31■□□□□ 0.36
SNRPD2-207ENST00000588599 PHLPP1O60346 1717 aa17.31■□□□□ 0.36
SNRPD2-207ENST00000588599 ITGAEP38570 1179 aa17.3■□□□□ 0.36
SNRPD2-207ENST00000588599 C14orf37Q86TY3 774 aa17.3■□□□□ 0.36
SNRPD2-207ENST00000588599 C19orf44Q9H6X5 657 aa17.3■□□□□ 0.36
SNRPD2-207ENST00000588599 NUP155O75694 1391 aa17.29■□□□□ 0.36
SNRPD2-207ENST00000588599 ROCK1Q13464 1354 aa17.29■□□□□ 0.36
SNRPD2-207ENST00000588599 NCOA3Q9Y6Q9 1424 aa17.29■□□□□ 0.36
SNRPD2-207ENST00000588599 JCADQ9P266 1359 aa17.28■□□□□ 0.36
SNRPD2-207ENST00000588599 AMOTL2Q9Y2J4 779 aa17.28■□□□□ 0.36
SNRPD2-207ENST00000588599 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.36
SNRPD2-207ENST00000588599 ATF3P18847 181 aa17.26■□□□□ 0.35
SNRPD2-207ENST00000588599 CADPS2Q86UW7 1296 aa17.26■□□□□ 0.35
SNRPD2-207ENST00000588599 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
SNRPD2-207ENST00000588599 IQGAP3Q86VI3 1631 aa17.25■□□□□ 0.35
SNRPD2-207ENST00000588599 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.25■□□□□ 0.35
SNRPD2-207ENST00000588599 PTPRUQ92729 1446 aa17.23■□□□□ 0.35
SNRPD2-207ENST00000588599 COL16A1Q07092 1604 aaPredicted RBP17.23■□□□□ 0.35
SNRPD2-207ENST00000588599 SPATA31A6Q5VVP1 1343 aa17.21■□□□□ 0.34
SNRPD2-207ENST00000588599 DIP2AQ14689 1571 aa17.2■□□□□ 0.34
SNRPD2-207ENST00000588599 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
SNRPD2-207ENST00000588599 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
SNRPD2-207ENST00000588599 TRPM2O94759 1503 aa17.19■□□□□ 0.34
SNRPD2-207ENST00000588599 LRP6O75581 1613 aa17.18■□□□□ 0.34
SNRPD2-207ENST00000588599 MEX3CQ5U5Q3 659 aaKnown RBP17.18■□□□□ 0.34
SNRPD2-207ENST00000588599 SETD1AO15047 1707 aaKnown RBP17.17■□□□□ 0.34
SNRPD2-207ENST00000588599 AHDC1Q5TGY3 1603 aaPredicted RBP17.17■□□□□ 0.34
SNRPD2-207ENST00000588599 ZNF772Q68DY9 489 aaPredicted RBP17.16■□□□□ 0.34
SNRPD2-207ENST00000588599 NRXN3Q9Y4C0 1643 aa17.16■□□□□ 0.34
SNRPD2-207ENST00000588599 METP08581 1390 aa17.15■□□□□ 0.34
SNRPD2-207ENST00000588599 NUTM2BA6NNL0 878 aaPredicted RBP17.15■□□□□ 0.34
SNRPD2-207ENST00000588599 NUTM2EB1AL46 878 aaPredicted RBP17.15■□□□□ 0.34
SNRPD2-207ENST00000588599 NUTM2AQ8IVF1 878 aaPredicted RBP17.15■□□□□ 0.34
SNRPD2-207ENST00000588599 SPHKAPQ2M3C7 1700 aa17.15■□□□□ 0.34
SNRPD2-207ENST00000588599 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
SNRPD2-207ENST00000588599 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
SNRPD2-207ENST00000588599 SETBP1Q9Y6X0 1596 aa17.13■□□□□ 0.33
SNRPD2-207ENST00000588599 XRN1Q8IZH2 1706 aaKnown RBP17.12■□□□□ 0.33
SNRPD2-207ENST00000588599 DDX17Q92841 729 aaKnown RBP17.11■□□□□ 0.33
SNRPD2-207ENST00000588599 DCCP43146 1447 aa17.11■□□□□ 0.33
SNRPD2-207ENST00000588599 MST1RQ04912 1400 aa17.11■□□□□ 0.33
SNRPD2-207ENST00000588599 RXRBP28702 533 aa17.1■□□□□ 0.33
SNRPD2-207ENST00000588599 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNRPD2-207ENST00000588599 LRRC59Q96AG4 307 aaKnown RBP17.1■□□□□ 0.33
SNRPD2-207ENST00000588599 CLTCL1P53675 1640 aa17.08■□□□□ 0.32
SNRPD2-207ENST00000588599 ASXL1Q8IXJ9 1541 aa17.08■□□□□ 0.32
SNRPD2-207ENST00000588599 SETD5Q9C0A6 1442 aa17.08■□□□□ 0.32
SNRPD2-207ENST00000588599 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
SNRPD2-207ENST00000588599 AFF2P51816 1311 aa17.06■□□□□ 0.32
SNRPD2-207ENST00000588599 KIF1BO60333 1816 aa17.06■□□□□ 0.32
SNRPD2-207ENST00000588599 NHSL1Q5SYE7 1610 aa17.05■□□□□ 0.32
SNRPD2-207ENST00000588599 NAIPQ13075 1403 aa17.04■□□□□ 0.32
SNRPD2-207ENST00000588599 ADGRL3Q9HAR2 1447 aa17.04■□□□□ 0.32
SNRPD2-207ENST00000588599 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
SNRPD2-207ENST00000588599 C8orf37Q96NL8 207 aa17.02■□□□□ 0.32
SNRPD2-207ENST00000588599 ORAI2Q96SN7 254 aa17.02■□□□□ 0.32
SNRPD2-207ENST00000588599 QTRT2Q9H974 415 aaKnown RBP17.02■□□□□ 0.32
SNRPD2-207ENST00000588599 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.31
SNRPD2-207ENST00000588599 PNPLA6Q8IY17 1366 aa17.02■□□□□ 0.31
SNRPD2-207ENST00000588599 NALCNQ8IZF0 1738 aa17.01■□□□□ 0.31
SNRPD2-207ENST00000588599 ROBO2Q9HCK4 1378 aa17.01■□□□□ 0.31
SNRPD2-207ENST00000588599 C1orf167Q5SNV9 1468 aa17■□□□□ 0.31
SNRPD2-207ENST00000588599 RPGRIP1LQ68CZ1 1315 aa16.99■□□□□ 0.31
SNRPD2-207ENST00000588599 ADAMTS2O95450 1211 aa16.99■□□□□ 0.31
SNRPD2-207ENST00000588599 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
SNRPD2-207ENST00000588599 RBM6P78332 1123 aaKnown RBP16.98■□□□□ 0.31
SNRPD2-207ENST00000588599 NGLY1Q96IV0 654 aa16.98■□□□□ 0.31
SNRPD2-207ENST00000588599 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
SNRPD2-207ENST00000588599 SOS2Q07890 1332 aaPredicted RBP16.97■□□□□ 0.31
SNRPD2-207ENST00000588599 FOXD1Q16676 465 aa16.95■□□□□ 0.3
SNRPD2-207ENST00000588599 PTCH1Q13635 1447 aa16.95■□□□□ 0.3
SNRPD2-207ENST00000588599 LAMC1P11047 1609 aa16.93■□□□□ 0.3
SNRPD2-207ENST00000588599 PPLO60437 1756 aa16.93■□□□□ 0.3
SNRPD2-207ENST00000588599 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
SNRPD2-207ENST00000588599 RGS12O14924 1447 aa16.92■□□□□ 0.3
SNRPD2-207ENST00000588599 RGL3Q3MIN7 710 aa16.91■□□□□ 0.3
SNRPD2-207ENST00000588599 ESCO1Q5FWF5 840 aa16.91■□□□□ 0.3
SNRPD2-207ENST00000588599 USP21Q9UK80 565 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms