RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 MYO5BQ9ULV0 1848 aa25.63■■□□□ 1.69
RFX1-203ENST00000588520 PLEKHG1Q9ULL1 1385 aa25.62■■□□□ 1.69
RFX1-203ENST00000588520 CHGAP10645 457 aaKnown RBP25.62■■□□□ 1.69
RFX1-203ENST00000588520 PPP1R15AO75807 674 aaPredicted RBP25.6■■□□□ 1.69
RFX1-203ENST00000588520 CLTCL1P53675 1640 aa25.58■■□□□ 1.69
RFX1-203ENST00000588520 MPHOSPH9Q99550 1183 aa25.56■■□□□ 1.68
RFX1-203ENST00000588520 HRCP23327 699 aa25.55■■□□□ 1.68
RFX1-203ENST00000588520 RAB3GAP2Q9H2M9 1393 aa25.55■■□□□ 1.68
RFX1-203ENST00000588520 KIF1BO60333 1816 aa25.53■■□□□ 1.68
RFX1-203ENST00000588520 DIP2AQ14689 1571 aa25.53■■□□□ 1.68
RFX1-203ENST00000588520 BCANQ96GW7 911 aa25.52■■□□□ 1.68
RFX1-203ENST00000588520 STRCP1A6NGW2 1772 aa25.51■■□□□ 1.67
RFX1-203ENST00000588520 KCNA6P17658 529 aa25.51■■□□□ 1.67
RFX1-203ENST00000588520 TBX22Q9Y458 520 aa25.51■■□□□ 1.67
RFX1-203ENST00000588520 LRRC7Q96NW7 1537 aa25.51■■□□□ 1.67
RFX1-203ENST00000588520 SLC26A8Q96RN1 970 aa25.5■■□□□ 1.67
RFX1-203ENST00000588520 NWD1Q149M9 1564 aa25.49■■□□□ 1.67
RFX1-203ENST00000588520 PIK3R4Q99570 1358 aa25.49■■□□□ 1.67
RFX1-203ENST00000588520 ZNF326Q5BKZ1 582 aaKnown RBP25.49■■□□□ 1.67
RFX1-203ENST00000588520 NKTRP30414 1462 aaKnown RBP25.48■■□□□ 1.67
RFX1-203ENST00000588520 CCDC144AA2RUR9 1427 aa25.48■■□□□ 1.67
RFX1-203ENST00000588520 RPGRIP1LQ68CZ1 1315 aa25.47■■□□□ 1.67
RFX1-203ENST00000588520 UBAP1LF5GYI3 381 aa25.46■■□□□ 1.67
RFX1-203ENST00000588520 TOM1O60784 492 aa25.46■■□□□ 1.67
RFX1-203ENST00000588520 NEXMIFQ5QGS0 1516 aa25.46■■□□□ 1.67
RFX1-203ENST00000588520 ADAMTS13Q76LX8 1427 aa25.46■■□□□ 1.67
RFX1-203ENST00000588520 SETBP1Q9Y6X0 1596 aa25.45■■□□□ 1.66
RFX1-203ENST00000588520 FOXD1Q16676 465 aa25.42■■□□□ 1.66
RFX1-203ENST00000588520 VGFO15240 615 aaPredicted RBP25.41■■□□□ 1.66
RFX1-203ENST00000588520 NUTM2DQ5VT03 806 aaPredicted RBP25.41■■□□□ 1.66
RFX1-203ENST00000588520 CHD2O14647 1828 aaKnown RBP25.41■■□□□ 1.66
RFX1-203ENST00000588520 NRXN3Q9Y4C0 1643 aa25.37■■□□□ 1.65
RFX1-203ENST00000588520 NCOA3Q9Y6Q9 1424 aa25.37■■□□□ 1.65
RFX1-203ENST00000588520 TMEM94Q12767 1356 aa25.36■■□□□ 1.65
RFX1-203ENST00000588520 SPATA31E1Q6ZUB1 1445 aa25.36■■□□□ 1.65
RFX1-203ENST00000588520 PROSER2Q86WR7 435 aaPredicted RBP25.35■■□□□ 1.65
RFX1-203ENST00000588520 XIRP1Q702N8 1843 aaKnown RBP25.34■■□□□ 1.65
RFX1-203ENST00000588520 PPLO60437 1756 aa25.33■■□□□ 1.65
RFX1-203ENST00000588520 ANKRD30BQ9BXX2 1392 aa25.32■■□□□ 1.64
RFX1-203ENST00000588520 ALKQ9UM73 1620 aa25.3■■□□□ 1.64
RFX1-203ENST00000588520 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
RFX1-203ENST00000588520 MSH6P52701 1360 aa25.28■■□□□ 1.64
RFX1-203ENST00000588520 AMOTL2Q9Y2J4 779 aa25.27■■□□□ 1.64
RFX1-203ENST00000588520 XRN1Q8IZH2 1706 aaKnown RBP25.26■■□□□ 1.63
RFX1-203ENST00000588520 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
RFX1-203ENST00000588520 IFT172Q9UG01 1749 aa25.26■■□□□ 1.63
RFX1-203ENST00000588520 PIP4K2BP78356 416 aa25.25■■□□□ 1.63
RFX1-203ENST00000588520 METP08581 1390 aa25.24■■□□□ 1.63
RFX1-203ENST00000588520 SCAF1Q9H7N4 1312 aaKnown RBP25.24■■□□□ 1.63
RFX1-203ENST00000588520 RGL3Q3MIN7 710 aa25.23■■□□□ 1.63
RFX1-203ENST00000588520 PRAG1Q86YV5 1406 aa25.22■■□□□ 1.63
RFX1-203ENST00000588520 SETD1AO15047 1707 aaKnown RBP25.22■■□□□ 1.63
RFX1-203ENST00000588520 FAM135BQ49AJ0 1406 aa25.2■■□□□ 1.62
RFX1-203ENST00000588520 MYOM2P54296 1465 aa25.19■■□□□ 1.62
RFX1-203ENST00000588520 STAC3Q96MF2 364 aa25.18■■□□□ 1.62
RFX1-203ENST00000588520 C19orf44Q9H6X5 657 aa25.18■■□□□ 1.62
RFX1-203ENST00000588520 PIK3C2GO75747 1445 aa25.18■■□□□ 1.62
RFX1-203ENST00000588520 PTCH1Q13635 1447 aa25.18■■□□□ 1.62
RFX1-203ENST00000588520 ADGRF5Q8IZF2 1346 aa25.17■■□□□ 1.62
RFX1-203ENST00000588520 DCCP43146 1447 aa25.17■■□□□ 1.62
RFX1-203ENST00000588520 C14orf37Q86TY3 774 aa25.16■■□□□ 1.62
RFX1-203ENST00000588520 CADPS2Q86UW7 1296 aa25.16■■□□□ 1.62
RFX1-203ENST00000588520 RBM33Q96EV2 1170 aaKnown RBP25.16■■□□□ 1.62
RFX1-203ENST00000588520 NRXN1Q9ULB1 1477 aa25.15■■□□□ 1.62
RFX1-203ENST00000588520 HSPA1LP34931 641 aa25.13■■□□□ 1.61
RFX1-203ENST00000588520 ATF3P18847 181 aa25.11■■□□□ 1.61
RFX1-203ENST00000588520 SLAIN2Q9P270 581 aa25.11■■□□□ 1.61
RFX1-203ENST00000588520 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.11■■□□□ 1.61
RFX1-203ENST00000588520 LAMC1P11047 1609 aa25.11■■□□□ 1.61
RFX1-203ENST00000588520 TRIM26Q12899 539 aaPredicted RBP25.09■■□□□ 1.61
RFX1-203ENST00000588520 ADGRL3Q9HAR2 1447 aa25.09■■□□□ 1.61
RFX1-203ENST00000588520 TECPR2O15040 1411 aa25.08■■□□□ 1.61
RFX1-203ENST00000588520 C14orf93Q9H972 538 aaKnown RBP25.07■■□□□ 1.6
RFX1-203ENST00000588520 ROBO1Q9Y6N7 1651 aa25.07■■□□□ 1.6
RFX1-203ENST00000588520 LRPPRCP42704 1394 aaKnown RBP25.06■■□□□ 1.6
RFX1-203ENST00000588520 ABCC11Q96J66 1382 aa25.05■■□□□ 1.6
RFX1-203ENST00000588520 ROBO2Q9HCK4 1378 aa25.05■■□□□ 1.6
RFX1-203ENST00000588520 KNDC1Q76NI1 1749 aa25.03■■□□□ 1.6
RFX1-203ENST00000588520 ASXL1Q8IXJ9 1541 aa25.02■■□□□ 1.6
RFX1-203ENST00000588520 SIRT1Q96EB6 747 aa25.01■■□□□ 1.59
RFX1-203ENST00000588520 NALCNQ8IZF0 1738 aa25■■□□□ 1.59
RFX1-203ENST00000588520 DCAF11Q8TEB1 546 aa25■■□□□ 1.59
RFX1-203ENST00000588520 DHX57Q6P158 1386 aaKnown RBP25■■□□□ 1.59
RFX1-203ENST00000588520 YTHDC2Q9H6S0 1430 aaKnown RBP25■■□□□ 1.59
RFX1-203ENST00000588520 MST1RQ04912 1400 aa24.98■■□□□ 1.59
RFX1-203ENST00000588520 CFAP70Q5T0N1 1121 aa24.97■■□□□ 1.59
RFX1-203ENST00000588520 TMEM132EQ6IEE7 984 aa24.96■■□□□ 1.59
RFX1-203ENST00000588520 CDC42BPGQ6DT37 1551 aa24.94■■□□□ 1.58
RFX1-203ENST00000588520 AHDC1Q5TGY3 1603 aaPredicted RBP24.94■■□□□ 1.58
RFX1-203ENST00000588520 STK26Q9P289 416 aa24.93■■□□□ 1.58
RFX1-203ENST00000588520 KDM2AQ9Y2K7 1162 aa24.93■■□□□ 1.58
RFX1-203ENST00000588520 DLC1Q96QB1 1528 aa24.92■■□□□ 1.58
RFX1-203ENST00000588520 ADGRB1O14514 1584 aa24.92■■□□□ 1.58
RFX1-203ENST00000588520 BRINP3Q76B58 766 aa24.91■■□□□ 1.58
RFX1-203ENST00000588520 PHLPP1O60346 1717 aa24.91■■□□□ 1.58
RFX1-203ENST00000588520 DISP3Q9P2K9 1392 aa24.91■■□□□ 1.58
RFX1-203ENST00000588520 C1orf167Q5SNV9 1468 aa24.89■■□□□ 1.57
RFX1-203ENST00000588520 MED1Q15648 1581 aaPredicted RBP24.88■■□□□ 1.57
RFX1-203ENST00000588520 COL16A1Q07092 1604 aaPredicted RBP24.87■■□□□ 1.57
RFX1-203ENST00000588520 KIAA1210Q9ULL0 1709 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms