RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 RBM33Q96EV2 1170 aaKnown RBP17.64■□□□□ 0.41
PRKCSH-207ENST00000588269 EID1Q9Y6B2 187 aa17.62■□□□□ 0.41
PRKCSH-207ENST00000588269 IDI1Q13907 227 aa17.6■□□□□ 0.41
PRKCSH-207ENST00000588269 ACIN1Q9UKV3 1341 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-207ENST00000588269 TMEM2Q9UHN6 1383 aa17.6■□□□□ 0.41
PRKCSH-207ENST00000588269 E9PCH4 1651 aa17.6■□□□□ 0.41
PRKCSH-207ENST00000588269 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
PRKCSH-207ENST00000588269 RGS17Q9UGC6 210 aaPredicted RBP17.56■□□□□ 0.4
PRKCSH-207ENST00000588269 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
PRKCSH-207ENST00000588269 HDGFP51858 240 aaKnown RBP17.55■□□□□ 0.4
PRKCSH-207ENST00000588269 SPHKAPQ2M3C7 1700 aa17.54■□□□□ 0.4
PRKCSH-207ENST00000588269 MYO5BQ9ULV0 1848 aa17.54■□□□□ 0.4
PRKCSH-207ENST00000588269 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
PRKCSH-207ENST00000588269 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
PRKCSH-207ENST00000588269 ROBO1Q9Y6N7 1651 aa17.51■□□□□ 0.39
PRKCSH-207ENST00000588269 TRPM2O94759 1503 aa17.51■□□□□ 0.39
PRKCSH-207ENST00000588269 KCNA6P17658 529 aa17.5■□□□□ 0.39
PRKCSH-207ENST00000588269 PROSER2Q86WR7 435 aaPredicted RBP17.5■□□□□ 0.39
PRKCSH-207ENST00000588269 BCANQ96GW7 911 aa17.5■□□□□ 0.39
PRKCSH-207ENST00000588269 TMEM131LA2VDJ0 1609 aa17.5■□□□□ 0.39
PRKCSH-207ENST00000588269 CHGAP10645 457 aaKnown RBP17.49■□□□□ 0.39
PRKCSH-207ENST00000588269 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
PRKCSH-207ENST00000588269 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
PRKCSH-207ENST00000588269 RIMS2Q9UQ26 1411 aa17.47■□□□□ 0.39
PRKCSH-207ENST00000588269 NUTM2DQ5VT03 806 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-207ENST00000588269 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
PRKCSH-207ENST00000588269 NWD1Q149M9 1564 aa17.46■□□□□ 0.39
PRKCSH-207ENST00000588269 ZFYVE9O95405 1425 aa17.46■□□□□ 0.39
PRKCSH-207ENST00000588269 POTEAQ6S8J7 498 aa17.45■□□□□ 0.38
PRKCSH-207ENST00000588269 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
PRKCSH-207ENST00000588269 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
PRKCSH-207ENST00000588269 DIP2AQ14689 1571 aa17.42■□□□□ 0.38
PRKCSH-207ENST00000588269 NKTRP30414 1462 aaKnown RBP17.42■□□□□ 0.38
PRKCSH-207ENST00000588269 CLTCL1P53675 1640 aa17.41■□□□□ 0.38
PRKCSH-207ENST00000588269 CHD2O14647 1828 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-207ENST00000588269 ZNF326Q5BKZ1 582 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-207ENST00000588269 PHLPP1O60346 1717 aa17.4■□□□□ 0.38
PRKCSH-207ENST00000588269 KIF1BO60333 1816 aa17.4■□□□□ 0.38
PRKCSH-207ENST00000588269 MSH6P52701 1360 aa17.4■□□□□ 0.38
PRKCSH-207ENST00000588269 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
PRKCSH-207ENST00000588269 SETD1AO15047 1707 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-207ENST00000588269 SLAIN2Q9P270 581 aa17.37■□□□□ 0.37
PRKCSH-207ENST00000588269 RAB3GAP2Q9H2M9 1393 aa17.37■□□□□ 0.37
PRKCSH-207ENST00000588269 ADAMTS13Q76LX8 1427 aa17.36■□□□□ 0.37
PRKCSH-207ENST00000588269 MPHOSPH9Q99550 1183 aa17.35■□□□□ 0.37
PRKCSH-207ENST00000588269 PIK3R4Q99570 1358 aa17.35■□□□□ 0.37
PRKCSH-207ENST00000588269 COL16A1Q07092 1604 aaPredicted RBP17.33■□□□□ 0.37
PRKCSH-207ENST00000588269 C14orf37Q86TY3 774 aa17.33■□□□□ 0.36
PRKCSH-207ENST00000588269 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
PRKCSH-207ENST00000588269 NEXMIFQ5QGS0 1516 aa17.32■□□□□ 0.36
PRKCSH-207ENST00000588269 RPGRIP1LQ68CZ1 1315 aa17.32■□□□□ 0.36
PRKCSH-207ENST00000588269 TBX22Q9Y458 520 aa17.32■□□□□ 0.36
PRKCSH-207ENST00000588269 LRP6O75581 1613 aa17.32■□□□□ 0.36
PRKCSH-207ENST00000588269 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-207ENST00000588269 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
PRKCSH-207ENST00000588269 HRCP23327 699 aa17.3■□□□□ 0.36
PRKCSH-207ENST00000588269 JCADQ9P266 1359 aa17.29■□□□□ 0.36
PRKCSH-207ENST00000588269 VGFO15240 615 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-207ENST00000588269 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
PRKCSH-207ENST00000588269 FOXD1Q16676 465 aa17.26■□□□□ 0.35
PRKCSH-207ENST00000588269 NCOA3Q9Y6Q9 1424 aa17.25■□□□□ 0.35
PRKCSH-207ENST00000588269 AMOTL2Q9Y2J4 779 aa17.25■□□□□ 0.35
PRKCSH-207ENST00000588269 ANKRD30BQ9BXX2 1392 aa17.25■□□□□ 0.35
PRKCSH-207ENST00000588269 PPLO60437 1756 aa17.23■□□□□ 0.35
PRKCSH-207ENST00000588269 ATF3P18847 181 aa17.23■□□□□ 0.35
PRKCSH-207ENST00000588269 AHDC1Q5TGY3 1603 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-207ENST00000588269 MEX3CQ5U5Q3 659 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-207ENST00000588269 C19orf44Q9H6X5 657 aa17.22■□□□□ 0.35
PRKCSH-207ENST00000588269 SPATA31E1Q6ZUB1 1445 aa17.21■□□□□ 0.35
PRKCSH-207ENST00000588269 NUTM2BA6NNL0 878 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-207ENST00000588269 NUTM2EB1AL46 878 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-207ENST00000588269 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
PRKCSH-207ENST00000588269 CADPS2Q86UW7 1296 aa17.21■□□□□ 0.35
PRKCSH-207ENST00000588269 NUTM2AQ8IVF1 878 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-207ENST00000588269 DDX17Q92841 729 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-207ENST00000588269 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-207ENST00000588269 METP08581 1390 aa17.2■□□□□ 0.34
PRKCSH-207ENST00000588269 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
PRKCSH-207ENST00000588269 SPATA31A6Q5VVP1 1343 aa17.18■□□□□ 0.34
PRKCSH-207ENST00000588269 ASXL1Q8IXJ9 1541 aa17.17■□□□□ 0.34
PRKCSH-207ENST00000588269 PTCH1Q13635 1447 aa17.17■□□□□ 0.34
PRKCSH-207ENST00000588269 RGL3Q3MIN7 710 aa17.17■□□□□ 0.34
PRKCSH-207ENST00000588269 IFT172Q9UG01 1749 aa17.17■□□□□ 0.34
PRKCSH-207ENST00000588269 DCCP43146 1447 aa17.16■□□□□ 0.34
PRKCSH-207ENST00000588269 MST1RQ04912 1400 aa17.16■□□□□ 0.34
PRKCSH-207ENST00000588269 MYOM2P54296 1465 aa17.16■□□□□ 0.34
PRKCSH-207ENST00000588269 LAMC1P11047 1609 aa17.14■□□□□ 0.33
PRKCSH-207ENST00000588269 PRAG1Q86YV5 1406 aa17.14■□□□□ 0.33
PRKCSH-207ENST00000588269 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
PRKCSH-207ENST00000588269 NHSL1Q5SYE7 1610 aa17.13■□□□□ 0.33
PRKCSH-207ENST00000588269 PIK3C2GO75747 1445 aa17.13■□□□□ 0.33
PRKCSH-207ENST00000588269 ZNF772Q68DY9 489 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-207ENST00000588269 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
PRKCSH-207ENST00000588269 STAC3Q96MF2 364 aa17.11■□□□□ 0.33
PRKCSH-207ENST00000588269 AFF2P51816 1311 aa17.11■□□□□ 0.33
PRKCSH-207ENST00000588269 ADGRL3Q9HAR2 1447 aa17.11■□□□□ 0.33
PRKCSH-207ENST00000588269 ADGRF5Q8IZF2 1346 aa17.09■□□□□ 0.33
PRKCSH-207ENST00000588269 NRXN1Q9ULB1 1477 aa17.08■□□□□ 0.32
PRKCSH-207ENST00000588269 RXRBP28702 533 aa17.08■□□□□ 0.32
PRKCSH-207ENST00000588269 C8orf37Q96NL8 207 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms