RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
PKN1-211ENST00000588200 MYO5BQ9ULV0 1848 aa20.46■□□□□ 0.87
PKN1-211ENST00000588200 NKTRP30414 1462 aaKnown RBP20.46■□□□□ 0.87
PKN1-211ENST00000588200 MED1Q15648 1581 aaPredicted RBP20.45■□□□□ 0.86
PKN1-211ENST00000588200 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
PKN1-211ENST00000588200 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.43■□□□□ 0.86
PKN1-211ENST00000588200 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
PKN1-211ENST00000588200 TMEM94Q12767 1356 aa20.43■□□□□ 0.86
PKN1-211ENST00000588200 RIMS2Q9UQ26 1411 aa20.43■□□□□ 0.86
PKN1-211ENST00000588200 CHD2O14647 1828 aaKnown RBP20.42■□□□□ 0.86
PKN1-211ENST00000588200 TBX22Q9Y458 520 aa20.42■□□□□ 0.86
PKN1-211ENST00000588200 NUP155O75694 1391 aa20.42■□□□□ 0.86
PKN1-211ENST00000588200 RRBP1Q9P2E9 1410 aaKnown RBP20.41■□□□□ 0.86
PKN1-211ENST00000588200 NCOA3Q9Y6Q9 1424 aa20.4■□□□□ 0.86
PKN1-211ENST00000588200 PIK3R4Q99570 1358 aa20.38■□□□□ 0.85
PKN1-211ENST00000588200 PROSER2Q86WR7 435 aaPredicted RBP20.38■□□□□ 0.85
PKN1-211ENST00000588200 DIP2AQ14689 1571 aa20.37■□□□□ 0.85
PKN1-211ENST00000588200 ADAMTS13Q76LX8 1427 aa20.35■□□□□ 0.85
PKN1-211ENST00000588200 PPP1R15AO75807 674 aaPredicted RBP20.33■□□□□ 0.85
PKN1-211ENST00000588200 SPHKAPQ2M3C7 1700 aa20.33■□□□□ 0.84
PKN1-211ENST00000588200 ITGAEP38570 1179 aa20.32■□□□□ 0.84
PKN1-211ENST00000588200 NAIPQ13075 1403 aa20.31■□□□□ 0.84
PKN1-211ENST00000588200 BCANQ96GW7 911 aa20.31■□□□□ 0.84
PKN1-211ENST00000588200 MSH6P52701 1360 aa20.31■□□□□ 0.84
PKN1-211ENST00000588200 ROBO1Q9Y6N7 1651 aa20.3■□□□□ 0.84
PKN1-211ENST00000588200 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
PKN1-211ENST00000588200 CHGAP10645 457 aaKnown RBP20.28■□□□□ 0.84
PKN1-211ENST00000588200 SLAIN2Q9P270 581 aa20.27■□□□□ 0.84
PKN1-211ENST00000588200 TRPM2O94759 1503 aa20.27■□□□□ 0.83
PKN1-211ENST00000588200 SETBP1Q9Y6X0 1596 aa20.26■□□□□ 0.83
PKN1-211ENST00000588200 RBM33Q96EV2 1170 aaKnown RBP20.25■□□□□ 0.83
PKN1-211ENST00000588200 HFM1A2PYH4 1435 aa20.25■□□□□ 0.83
PKN1-211ENST00000588200 NRXN3Q9Y4C0 1643 aa20.24■□□□□ 0.83
PKN1-211ENST00000588200 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
PKN1-211ENST00000588200 C19orf44Q9H6X5 657 aa20.23■□□□□ 0.83
PKN1-211ENST00000588200 PTPRUQ92729 1446 aa20.2■□□□□ 0.82
PKN1-211ENST00000588200 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
PKN1-211ENST00000588200 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
PKN1-211ENST00000588200 CADPS2Q86UW7 1296 aa20.2■□□□□ 0.82
PKN1-211ENST00000588200 AMOTL2Q9Y2J4 779 aa20.2■□□□□ 0.82
PKN1-211ENST00000588200 CLTCL1P53675 1640 aa20.2■□□□□ 0.82
PKN1-211ENST00000588200 XRN1Q8IZH2 1706 aaKnown RBP20.19■□□□□ 0.82
PKN1-211ENST00000588200 KIF1BO60333 1816 aa20.19■□□□□ 0.82
PKN1-211ENST00000588200 DCCP43146 1447 aa20.19■□□□□ 0.82
PKN1-211ENST00000588200 NEXMIFQ5QGS0 1516 aa20.18■□□□□ 0.82
PKN1-211ENST00000588200 RGS17Q9UGC6 210 aaPredicted RBP20.18■□□□□ 0.82
PKN1-211ENST00000588200 PHLPP1O60346 1717 aa20.16■□□□□ 0.82
PKN1-211ENST00000588200 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
PKN1-211ENST00000588200 JCADQ9P266 1359 aa20.15■□□□□ 0.82
PKN1-211ENST00000588200 COL16A1Q07092 1604 aaPredicted RBP20.14■□□□□ 0.81
PKN1-211ENST00000588200 AHDC1Q5TGY3 1603 aaPredicted RBP20.14■□□□□ 0.81
PKN1-211ENST00000588200 ZNF326Q5BKZ1 582 aaKnown RBP20.14■□□□□ 0.81
PKN1-211ENST00000588200 ATF3P18847 181 aa20.13■□□□□ 0.81
PKN1-211ENST00000588200 METP08581 1390 aa20.12■□□□□ 0.81
PKN1-211ENST00000588200 RPGRIP1LQ68CZ1 1315 aa20.12■□□□□ 0.81
PKN1-211ENST00000588200 PRAG1Q86YV5 1406 aa20.11■□□□□ 0.81
PKN1-211ENST00000588200 C14orf37Q86TY3 774 aa20.11■□□□□ 0.81
PKN1-211ENST00000588200 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
PKN1-211ENST00000588200 SLC4A1APQ9BWU0 796 aaKnown RBP20.09■□□□□ 0.81
PKN1-211ENST00000588200 ACIN1Q9UKV3 1341 aaKnown RBP20.08■□□□□ 0.81
PKN1-211ENST00000588200 SETD1AO15047 1707 aaKnown RBP20.08■□□□□ 0.81
PKN1-211ENST00000588200 TRIM52Q96A61 297 aa20.08■□□□□ 0.81
PKN1-211ENST00000588200 SPATA31A6Q5VVP1 1343 aa20.07■□□□□ 0.8
PKN1-211ENST00000588200 SHPRHQ149N8 1683 aa20.07■□□□□ 0.8
PKN1-211ENST00000588200 BRINP3Q76B58 766 aa20.06■□□□□ 0.8
PKN1-211ENST00000588200 ADGRL3Q9HAR2 1447 aa20.06■□□□□ 0.8
PKN1-211ENST00000588200 MST1RQ04912 1400 aa20.05■□□□□ 0.8
PKN1-211ENST00000588200 PTCH1Q13635 1447 aa20.05■□□□□ 0.8
PKN1-211ENST00000588200 PPLO60437 1756 aa20.04■□□□□ 0.8
PKN1-211ENST00000588200 POTEAQ6S8J7 498 aa20.03■□□□□ 0.8
PKN1-211ENST00000588200 NHSL1Q5SYE7 1610 aa20.02■□□□□ 0.8
PKN1-211ENST00000588200 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.79
PKN1-211ENST00000588200 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.79
PKN1-211ENST00000588200 NALCNQ8IZF0 1738 aa20.01■□□□□ 0.79
PKN1-211ENST00000588200 LAMC1P11047 1609 aa19.99■□□□□ 0.79
PKN1-211ENST00000588200 SPATA31E1Q6ZUB1 1445 aa19.98■□□□□ 0.79
PKN1-211ENST00000588200 LRP6O75581 1613 aa19.98■□□□□ 0.79
PKN1-211ENST00000588200 MPHOSPH9Q99550 1183 aa19.97■□□□□ 0.79
PKN1-211ENST00000588200 CCDC144AA2RUR9 1427 aa19.96■□□□□ 0.79
PKN1-211ENST00000588200 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.79
PKN1-211ENST00000588200 LRRC59Q96AG4 307 aaKnown RBP19.95■□□□□ 0.78
PKN1-211ENST00000588200 IFT172Q9UG01 1749 aa19.95■□□□□ 0.78
PKN1-211ENST00000588200 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.78
PKN1-211ENST00000588200 C1orf167Q5SNV9 1468 aa19.94■□□□□ 0.78
PKN1-211ENST00000588200 ZNF772Q68DY9 489 aaPredicted RBP19.93■□□□□ 0.78
PKN1-211ENST00000588200 TECPR2O15040 1411 aa19.93■□□□□ 0.78
PKN1-211ENST00000588200 FOXD1Q16676 465 aa19.91■□□□□ 0.78
PKN1-211ENST00000588200 ADGRF5Q8IZF2 1346 aa19.89■□□□□ 0.77
PKN1-211ENST00000588200 ABCC11Q96J66 1382 aa19.88■□□□□ 0.77
PKN1-211ENST00000588200 SOS2Q07890 1332 aaPredicted RBP19.88■□□□□ 0.77
PKN1-211ENST00000588200 CDC42BPGQ6DT37 1551 aa19.87■□□□□ 0.77
PKN1-211ENST00000588200 PIK3C2GO75747 1445 aa19.87■□□□□ 0.77
PKN1-211ENST00000588200 PNPLA6Q8IY17 1366 aa19.87■□□□□ 0.77
PKN1-211ENST00000588200 KNDC1Q76NI1 1749 aa19.86■□□□□ 0.77
PKN1-211ENST00000588200 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
PKN1-211ENST00000588200 SIRT1Q96EB6 747 aa19.86■□□□□ 0.77
PKN1-211ENST00000588200 LRPPRCP42704 1394 aaKnown RBP19.85■□□□□ 0.77
PKN1-211ENST00000588200 NRXN1Q9ULB1 1477 aa19.85■□□□□ 0.77
PKN1-211ENST00000588200 RGL3Q3MIN7 710 aa19.84■□□□□ 0.77
PKN1-211ENST00000588200 CDK12Q9NYV4 1490 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms