RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-204ENST00000588166 ZFYVE9O95405 1425 aa22.57■■□□□ 1.2
KDM4B-204ENST00000588166 RBM33Q96EV2 1170 aaKnown RBP22.56■■□□□ 1.2
KDM4B-204ENST00000588166 PROSER2Q86WR7 435 aaPredicted RBP22.54■■□□□ 1.2
KDM4B-204ENST00000588166 ANKRD50Q9ULJ7 1429 aa22.54■■□□□ 1.2
KDM4B-204ENST00000588166 CHD2O14647 1828 aaKnown RBP22.54■■□□□ 1.2
KDM4B-204ENST00000588166 TMEM131LA2VDJ0 1609 aa22.53■■□□□ 1.2
KDM4B-204ENST00000588166 GCC2Q8IWJ2 1684 aa22.52■■□□□ 1.2
KDM4B-204ENST00000588166 PLEKHG1Q9ULL1 1385 aa22.5■■□□□ 1.19
KDM4B-204ENST00000588166 UNC13BO14795 1591 aa22.49■■□□□ 1.19
KDM4B-204ENST00000588166 POTEAQ6S8J7 498 aa22.48■■□□□ 1.19
KDM4B-204ENST00000588166 PPARGC1BQ86YN6 1023 aaKnown RBP22.48■■□□□ 1.19
KDM4B-204ENST00000588166 RIMS2Q9UQ26 1411 aa22.48■■□□□ 1.19
KDM4B-204ENST00000588166 MSH6P52701 1360 aa22.47■■□□□ 1.19
KDM4B-204ENST00000588166 PHLPP1O60346 1717 aa22.45■■□□□ 1.19
KDM4B-204ENST00000588166 FAM50AQ14320 339 aaKnown RBP22.45■■□□□ 1.18
KDM4B-204ENST00000588166 E9PCH4 1651 aa22.45■■□□□ 1.18
KDM4B-204ENST00000588166 SLAIN2Q9P270 581 aa22.44■■□□□ 1.18
KDM4B-204ENST00000588166 COL16A1Q07092 1604 aaPredicted RBP22.42■■□□□ 1.18
KDM4B-204ENST00000588166 ADAMTS13Q76LX8 1427 aa22.42■■□□□ 1.18
KDM4B-204ENST00000588166 BCANQ96GW7 911 aa22.42■■□□□ 1.18
KDM4B-204ENST00000588166 TBX22Q9Y458 520 aa22.41■■□□□ 1.18
KDM4B-204ENST00000588166 NCOA3Q9Y6Q9 1424 aa22.4■■□□□ 1.18
KDM4B-204ENST00000588166 IQGAP3Q86VI3 1631 aa22.39■■□□□ 1.18
KDM4B-204ENST00000588166 JCADQ9P266 1359 aa22.38■■□□□ 1.17
KDM4B-204ENST00000588166 DIP2AQ14689 1571 aa22.38■■□□□ 1.17
KDM4B-204ENST00000588166 PPP1R15AO75807 674 aaPredicted RBP22.38■■□□□ 1.17
KDM4B-204ENST00000588166 HDGFP51858 240 aaKnown RBP22.38■■□□□ 1.17
KDM4B-204ENST00000588166 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.37■■□□□ 1.17
KDM4B-204ENST00000588166 ROCK1Q13464 1354 aa22.37■■□□□ 1.17
KDM4B-204ENST00000588166 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.35■■□□□ 1.17
KDM4B-204ENST00000588166 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
KDM4B-204ENST00000588166 SETD1AO15047 1707 aaKnown RBP22.34■■□□□ 1.17
KDM4B-204ENST00000588166 RRBP1Q9P2E9 1410 aaKnown RBP22.34■■□□□ 1.17
KDM4B-204ENST00000588166 LRP6O75581 1613 aa22.33■■□□□ 1.17
KDM4B-204ENST00000588166 AHDC1Q5TGY3 1603 aaPredicted RBP22.33■■□□□ 1.17
KDM4B-204ENST00000588166 NUTM2DQ5VT03 806 aaPredicted RBP22.33■■□□□ 1.17
KDM4B-204ENST00000588166 CHGAP10645 457 aaKnown RBP22.31■■□□□ 1.16
KDM4B-204ENST00000588166 PTPRUQ92729 1446 aa22.31■■□□□ 1.16
KDM4B-204ENST00000588166 TRPM2O94759 1503 aa22.3■■□□□ 1.16
KDM4B-204ENST00000588166 SHPRHQ149N8 1683 aa22.3■■□□□ 1.16
KDM4B-204ENST00000588166 NRXN3Q9Y4C0 1643 aa22.29■■□□□ 1.16
KDM4B-204ENST00000588166 C19orf44Q9H6X5 657 aa22.29■■□□□ 1.16
KDM4B-204ENST00000588166 CADPS2Q86UW7 1296 aa22.27■■□□□ 1.16
KDM4B-204ENST00000588166 XRN1Q8IZH2 1706 aaKnown RBP22.27■■□□□ 1.16
KDM4B-204ENST00000588166 SPATA31A6Q5VVP1 1343 aa22.27■■□□□ 1.16
KDM4B-204ENST00000588166 NUP155O75694 1391 aa22.26■■□□□ 1.15
KDM4B-204ENST00000588166 C14orf37Q86TY3 774 aa22.25■■□□□ 1.15
KDM4B-204ENST00000588166 SETBP1Q9Y6X0 1596 aa22.25■■□□□ 1.15
KDM4B-204ENST00000588166 AMOTL2Q9Y2J4 779 aa22.24■■□□□ 1.15
KDM4B-204ENST00000588166 SPHKAPQ2M3C7 1700 aa22.23■■□□□ 1.15
KDM4B-204ENST00000588166 ATF3P18847 181 aa22.23■■□□□ 1.15
KDM4B-204ENST00000588166 DCCP43146 1447 aa22.23■■□□□ 1.15
KDM4B-204ENST00000588166 ITGAEP38570 1179 aa22.21■■□□□ 1.15
KDM4B-204ENST00000588166 BRINP3Q76B58 766 aa22.21■■□□□ 1.15
KDM4B-204ENST00000588166 ASXL1Q8IXJ9 1541 aa22.19■■□□□ 1.14
KDM4B-204ENST00000588166 NHSL1Q5SYE7 1610 aa22.18■■□□□ 1.14
KDM4B-204ENST00000588166 MST1RQ04912 1400 aa22.17■■□□□ 1.14
KDM4B-204ENST00000588166 METP08581 1390 aa22.16■■□□□ 1.14
KDM4B-204ENST00000588166 ZNF772Q68DY9 489 aaPredicted RBP22.16■■□□□ 1.14
KDM4B-204ENST00000588166 SETD5Q9C0A6 1442 aa22.14■■□□□ 1.14
KDM4B-204ENST00000588166 MEX3CQ5U5Q3 659 aaKnown RBP22.14■■□□□ 1.13
KDM4B-204ENST00000588166 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.13
KDM4B-204ENST00000588166 CLTCL1P53675 1640 aa22.13■■□□□ 1.13
KDM4B-204ENST00000588166 NALCNQ8IZF0 1738 aa22.11■■□□□ 1.13
KDM4B-204ENST00000588166 UPF1Q92900 1129 aaKnown RBP eCLIP22.11■■□□□ 1.13
KDM4B-204ENST00000588166 ADGRL3Q9HAR2 1447 aa22.11■■□□□ 1.13
KDM4B-204ENST00000588166 TRIM52Q96A61 297 aa22.09■■□□□ 1.13
KDM4B-204ENST00000588166 CDK12Q9NYV4 1490 aaPredicted RBP22.09■■□□□ 1.13
KDM4B-204ENST00000588166 ZNF326Q5BKZ1 582 aaKnown RBP22.07■■□□□ 1.12
KDM4B-204ENST00000588166 NUTM2BA6NNL0 878 aaPredicted RBP22.06■■□□□ 1.12
KDM4B-204ENST00000588166 NUTM2EB1AL46 878 aaPredicted RBP22.06■■□□□ 1.12
KDM4B-204ENST00000588166 NUTM2AQ8IVF1 878 aaPredicted RBP22.06■■□□□ 1.12
KDM4B-204ENST00000588166 KIF1BO60333 1816 aa22.06■■□□□ 1.12
KDM4B-204ENST00000588166 LAMC1P11047 1609 aa22.06■■□□□ 1.12
KDM4B-204ENST00000588166 SRCAPQ6ZRS2 3230 aa22.05■■□□□ 1.12
KDM4B-204ENST00000588166 RXRBP28702 533 aa22.05■■□□□ 1.12
KDM4B-204ENST00000588166 AFF2P51816 1311 aa22.05■■□□□ 1.12
KDM4B-204ENST00000588166 PNPLA6Q8IY17 1366 aa22.04■■□□□ 1.12
KDM4B-204ENST00000588166 DDX17Q92841 729 aaKnown RBP22.04■■□□□ 1.12
KDM4B-204ENST00000588166 LRRC59Q96AG4 307 aaKnown RBP22.03■■□□□ 1.12
KDM4B-204ENST00000588166 HFM1A2PYH4 1435 aa22.02■■□□□ 1.12
KDM4B-204ENST00000588166 NAIPQ13075 1403 aa22.02■■□□□ 1.12
KDM4B-204ENST00000588166 PTCH1Q13635 1447 aa22.01■■□□□ 1.11
KDM4B-204ENST00000588166 C1orf167Q5SNV9 1468 aa22.01■■□□□ 1.11
KDM4B-204ENST00000588166 PRAG1Q86YV5 1406 aa22■■□□□ 1.11
KDM4B-204ENST00000588166 ROBO2Q9HCK4 1378 aa21.98■■□□□ 1.11
KDM4B-204ENST00000588166 RGS12O14924 1447 aa21.97■■□□□ 1.11
KDM4B-204ENST00000588166 C8orf37Q96NL8 207 aa21.95■■□□□ 1.1
KDM4B-204ENST00000588166 EP400Q96L91 3159 aa21.95■■□□□ 1.1
KDM4B-204ENST00000588166 SOS2Q07890 1332 aaPredicted RBP21.94■■□□□ 1.1
KDM4B-204ENST00000588166 PPLO60437 1756 aa21.94■■□□□ 1.1
KDM4B-204ENST00000588166 QTRT2Q9H974 415 aaKnown RBP21.93■■□□□ 1.1
KDM4B-204ENST00000588166 VGFO15240 615 aaPredicted RBP21.92■■□□□ 1.1
KDM4B-204ENST00000588166 RBM6P78332 1123 aaKnown RBP21.92■■□□□ 1.1
KDM4B-204ENST00000588166 ORAI2Q96SN7 254 aa21.92■■□□□ 1.1
KDM4B-204ENST00000588166 COL22A1Q8NFW1 1626 aaPredicted RBP21.9■■□□□ 1.1
KDM4B-204ENST00000588166 RPGRIP1LQ68CZ1 1315 aa21.89■■□□□ 1.1
KDM4B-204ENST00000588166 ADAMTS2O95450 1211 aa21.88■■□□□ 1.09
KDM4B-204ENST00000588166 NGLY1Q96IV0 654 aa21.86■■□□□ 1.09
KDM4B-204ENST00000588166 CDC42BPGQ6DT37 1551 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms