RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 STAC3Q96MF2 364 aa20.25■□□□□ 0.83
CCDC130-208ENST00000588071 PPLO60437 1756 aa20.25■□□□□ 0.83
CCDC130-208ENST00000588071 VGFO15240 615 aaPredicted RBP20.24■□□□□ 0.83
CCDC130-208ENST00000588071 PPP1R15AO75807 674 aaPredicted RBP20.24■□□□□ 0.83
CCDC130-208ENST00000588071 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC130-208ENST00000588071 RIMS2Q9UQ26 1411 aa20.23■□□□□ 0.83
CCDC130-208ENST00000588071 EID1Q9Y6B2 187 aa20.23■□□□□ 0.83
CCDC130-208ENST00000588071 TMEM2Q9UHN6 1383 aa20.22■□□□□ 0.83
CCDC130-208ENST00000588071 IFT172Q9UG01 1749 aa20.22■□□□□ 0.83
CCDC130-208ENST00000588071 TXNDC2Q86VQ3 553 aa20.21■□□□□ 0.83
CCDC130-208ENST00000588071 NEXMIFQ5QGS0 1516 aa20.21■□□□□ 0.83
CCDC130-208ENST00000588071 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
CCDC130-208ENST00000588071 ANKLE2Q86XL3 938 aa20.18■□□□□ 0.82
CCDC130-208ENST00000588071 BCANQ96GW7 911 aa20.18■□□□□ 0.82
CCDC130-208ENST00000588071 ADGRF5Q8IZF2 1346 aa20.18■□□□□ 0.82
CCDC130-208ENST00000588071 SLIT1O75093 1534 aa20.17■□□□□ 0.82
CCDC130-208ENST00000588071 ZFYVE9O95405 1425 aa20.17■□□□□ 0.82
CCDC130-208ENST00000588071 LTKP29376 864 aa20.16■□□□□ 0.82
CCDC130-208ENST00000588071 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
CCDC130-208ENST00000588071 MYOM2P54296 1465 aa20.16■□□□□ 0.82
CCDC130-208ENST00000588071 ARHGAP23Q9P227 1491 aa20.16■□□□□ 0.82
CCDC130-208ENST00000588071 HSPA2P54652 639 aa20.15■□□□□ 0.82
CCDC130-208ENST00000588071 NBPF8Q3BBV2 869 aa20.15■□□□□ 0.82
CCDC130-208ENST00000588071 LMTK3Q96Q04 1460 aa20.13■□□□□ 0.81
CCDC130-208ENST00000588071 PRAG1Q86YV5 1406 aa20.13■□□□□ 0.81
CCDC130-208ENST00000588071 SCAF11Q99590 1463 aaKnown RBP20.11■□□□□ 0.81
CCDC130-208ENST00000588071 NCKAP5LQ9HCH0 1330 aa20.1■□□□□ 0.81
CCDC130-208ENST00000588071 NRXN1Q9ULB1 1477 aa20.1■□□□□ 0.81
CCDC130-208ENST00000588071 CFAP70Q5T0N1 1121 aa20.09■□□□□ 0.81
CCDC130-208ENST00000588071 POLR1AO95602 1720 aaPredicted RBP20.09■□□□□ 0.81
CCDC130-208ENST00000588071 C14orf93Q9H972 538 aaKnown RBP20.08■□□□□ 0.81
CCDC130-208ENST00000588071 PIK3C2GO75747 1445 aa20.08■□□□□ 0.8
CCDC130-208ENST00000588071 PLEKHG1Q9ULL1 1385 aa20.08■□□□□ 0.8
CCDC130-208ENST00000588071 TRPM1Q7Z4N2 1603 aa20.05■□□□□ 0.8
CCDC130-208ENST00000588071 KIAA1210Q9ULL0 1709 aa20.05■□□□□ 0.8
CCDC130-208ENST00000588071 NBPF1Q3BBV0 1214 aa20.04■□□□□ 0.8
CCDC130-208ENST00000588071 ROCK2O75116 1388 aaKnown RBP20.04■□□□□ 0.8
CCDC130-208ENST00000588071 IQGAP1P46940 1657 aa20.03■□□□□ 0.8
CCDC130-208ENST00000588071 ALKQ9UM73 1620 aa20.03■□□□□ 0.8
CCDC130-208ENST00000588071 SLC26A8Q96RN1 970 aa20.03■□□□□ 0.8
CCDC130-208ENST00000588071 SETBP1Q9Y6X0 1596 aa20.03■□□□□ 0.8
CCDC130-208ENST00000588071 NPHP4O75161 1426 aaPredicted RBP20.02■□□□□ 0.8
CCDC130-208ENST00000588071 LAMC1P11047 1609 aa20.02■□□□□ 0.79
CCDC130-208ENST00000588071 NRXN3Q9Y4C0 1643 aa20.02■□□□□ 0.79
CCDC130-208ENST00000588071 RALGAPBQ86X10 1494 aa20.01■□□□□ 0.79
CCDC130-208ENST00000588071 TMEM132EQ6IEE7 984 aa20.01■□□□□ 0.79
CCDC130-208ENST00000588071 CARD11Q9BXL7 1154 aa20.01■□□□□ 0.79
CCDC130-208ENST00000588071 TBX22Q9Y458 520 aa20.01■□□□□ 0.79
CCDC130-208ENST00000588071 STRCQ7RTU9 1775 aa20■□□□□ 0.79
CCDC130-208ENST00000588071 MED14O60244 1454 aa20■□□□□ 0.79
CCDC130-208ENST00000588071 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
CCDC130-208ENST00000588071 SETD1AO15047 1707 aaKnown RBP19.96■□□□□ 0.79
CCDC130-208ENST00000588071 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
CCDC130-208ENST00000588071 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
CCDC130-208ENST00000588071 STK26Q9P289 416 aa19.95■□□□□ 0.78
CCDC130-208ENST00000588071 METP08581 1390 aa19.95■□□□□ 0.78
CCDC130-208ENST00000588071 GPRASP1Q5JY77 1395 aa19.94■□□□□ 0.78
CCDC130-208ENST00000588071 EIF4G2P78344 907 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCDC130-208ENST00000588071 TRAK1Q9UPV9 953 aa19.92■□□□□ 0.78
CCDC130-208ENST00000588071 ADGRB1O14514 1584 aa19.91■□□□□ 0.78
CCDC130-208ENST00000588071 YTHDC2Q9H6S0 1430 aaKnown RBP19.91■□□□□ 0.78
CCDC130-208ENST00000588071 ASXL1Q8IXJ9 1541 aa19.9■□□□□ 0.78
CCDC130-208ENST00000588071 CHD2O14647 1828 aaKnown RBP19.89■□□□□ 0.77
CCDC130-208ENST00000588071 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.77
CCDC130-208ENST00000588071 PIK3R4Q99570 1358 aa19.89■□□□□ 0.77
CCDC130-208ENST00000588071 AMOTL2Q9Y2J4 779 aa19.89■□□□□ 0.77
CCDC130-208ENST00000588071 USP47Q96K76 1375 aa19.88■□□□□ 0.77
CCDC130-208ENST00000588071 EIF3AQ14152 1382 aaKnown RBP19.86■□□□□ 0.77
CCDC130-208ENST00000588071 ABCC11Q96J66 1382 aa19.86■□□□□ 0.77
CCDC130-208ENST00000588071 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
CCDC130-208ENST00000588071 KCNA6P17658 529 aa19.86■□□□□ 0.77
CCDC130-208ENST00000588071 POGKQ9P215 609 aa19.86■□□□□ 0.77
CCDC130-208ENST00000588071 PTPRUQ92729 1446 aa19.85■□□□□ 0.77
CCDC130-208ENST00000588071 HIRIP3Q9BW71 556 aaPredicted RBP19.85■□□□□ 0.77
CCDC130-208ENST00000588071 ST20-MTHFSA0A0A6YYL1 179 aa19.84■□□□□ 0.77
CCDC130-208ENST00000588071 KNDC1Q76NI1 1749 aa19.83■□□□□ 0.77
CCDC130-208ENST00000588071 ARHGEF28Q8N1W1 1705 aaKnown RBP19.83■□□□□ 0.77
CCDC130-208ENST00000588071 SIRT1Q96EB6 747 aa19.83■□□□□ 0.77
CCDC130-208ENST00000588071 PRAM1Q96QH2 718 aa19.82■□□□□ 0.76
CCDC130-208ENST00000588071 CENPJQ9HC77 1338 aaPredicted RBP19.81■□□□□ 0.76
CCDC130-208ENST00000588071 SAFB2Q14151 953 aaKnown RBP eCLIP19.81■□□□□ 0.76
CCDC130-208ENST00000588071 WAPLQ7Z5K2 1190 aa19.81■□□□□ 0.76
CCDC130-208ENST00000588071 DLC1Q96QB1 1528 aa19.81■□□□□ 0.76
CCDC130-208ENST00000588071 XRN1Q8IZH2 1706 aaKnown RBP19.79■□□□□ 0.76
CCDC130-208ENST00000588071 TECPR2O15040 1411 aa19.79■□□□□ 0.76
CCDC130-208ENST00000588071 PROSER2Q86WR7 435 aaPredicted RBP19.78■□□□□ 0.76
CCDC130-208ENST00000588071 ROBO2Q9HCK4 1378 aa19.78■□□□□ 0.76
CCDC130-208ENST00000588071 FAM135BQ49AJ0 1406 aa19.77■□□□□ 0.76
CCDC130-208ENST00000588071 CPS1P31327 1500 aa19.77■□□□□ 0.76
CCDC130-208ENST00000588071 STRCP1A6NGW2 1772 aa19.77■□□□□ 0.76
CCDC130-208ENST00000588071 ZNF335Q9H4Z2 1342 aaPredicted RBP19.76■□□□□ 0.75
CCDC130-208ENST00000588071 QRICH2Q9H0J4 1663 aa19.76■□□□□ 0.75
CCDC130-208ENST00000588071 NWD1Q149M9 1564 aa19.76■□□□□ 0.75
CCDC130-208ENST00000588071 SLC24A1O60721 1099 aa19.76■□□□□ 0.75
CCDC130-208ENST00000588071 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
CCDC130-208ENST00000588071 PLEKHH1Q9ULM0 1364 aa19.75■□□□□ 0.75
CCDC130-208ENST00000588071 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
CCDC130-208ENST00000588071 ZNF316A6NFI3 1004 aaPredicted RBP19.73■□□□□ 0.75
CCDC130-208ENST00000588071 TMF1P82094 1093 aa19.73■□□□□ 0.75
CCDC130-208ENST00000588071 C14orf37Q86TY3 774 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms