RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 NKTRP30414 1462 aaKnown RBP26.45■■□□□ 1.82
GCDH-206ENST00000587832 CHD2O14647 1828 aaKnown RBP26.42■■□□□ 1.82
GCDH-206ENST00000587832 KCNA6P17658 529 aa26.41■■□□□ 1.82
GCDH-206ENST00000587832 PLEKHG1Q9ULL1 1385 aa26.39■■□□□ 1.82
GCDH-206ENST00000587832 RIMS2Q9UQ26 1411 aa26.38■■□□□ 1.81
GCDH-206ENST00000587832 TMEM94Q12767 1356 aa26.37■■□□□ 1.81
GCDH-206ENST00000587832 SLC26A8Q96RN1 970 aa26.37■■□□□ 1.81
GCDH-206ENST00000587832 DIP2AQ14689 1571 aa26.35■■□□□ 1.81
GCDH-206ENST00000587832 FAM135BQ49AJ0 1406 aa26.34■■□□□ 1.81
GCDH-206ENST00000587832 SPHKAPQ2M3C7 1700 aa26.34■■□□□ 1.81
GCDH-206ENST00000587832 HDGFP51858 240 aaKnown RBP26.33■■□□□ 1.81
GCDH-206ENST00000587832 ROBO1Q9Y6N7 1651 aa26.32■■□□□ 1.8
GCDH-206ENST00000587832 NUP155O75694 1391 aa26.32■■□□□ 1.8
GCDH-206ENST00000587832 PROSER2Q86WR7 435 aaPredicted RBP26.29■■□□□ 1.8
GCDH-206ENST00000587832 PPP1R15AO75807 674 aaPredicted RBP26.28■■□□□ 1.8
GCDH-206ENST00000587832 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.28■■□□□ 1.8
GCDH-206ENST00000587832 RRBP1Q9P2E9 1410 aaKnown RBP26.27■■□□□ 1.8
GCDH-206ENST00000587832 ADAMTS13Q76LX8 1427 aa26.26■■□□□ 1.79
GCDH-206ENST00000587832 BCANQ96GW7 911 aa26.26■■□□□ 1.79
GCDH-206ENST00000587832 ITGAEP38570 1179 aa26.25■■□□□ 1.79
GCDH-206ENST00000587832 TBX22Q9Y458 520 aa26.25■■□□□ 1.79
GCDH-206ENST00000587832 MSH6P52701 1360 aa26.24■■□□□ 1.79
GCDH-206ENST00000587832 NCOA3Q9Y6Q9 1424 aa26.23■■□□□ 1.79
GCDH-206ENST00000587832 PIK3R4Q99570 1358 aa26.23■■□□□ 1.79
GCDH-206ENST00000587832 TRPM2O94759 1503 aa26.22■■□□□ 1.79
GCDH-206ENST00000587832 CHGAP10645 457 aaKnown RBP26.2■■□□□ 1.78
GCDH-206ENST00000587832 PPARGC1BQ86YN6 1023 aaKnown RBP26.2■■□□□ 1.78
GCDH-206ENST00000587832 PHF23Q9BUL5 403 aaPredicted RBP26.2■■□□□ 1.78
GCDH-206ENST00000587832 SENP3Q9H4L4 574 aaPredicted RBP26.2■■□□□ 1.78
GCDH-206ENST00000587832 NRXN3Q9Y4C0 1643 aa26.19■■□□□ 1.78
GCDH-206ENST00000587832 SETBP1Q9Y6X0 1596 aa26.19■■□□□ 1.78
GCDH-206ENST00000587832 RBM33Q96EV2 1170 aaKnown RBP26.18■■□□□ 1.78
GCDH-206ENST00000587832 PHLPP1O60346 1717 aa26.17■■□□□ 1.78
GCDH-206ENST00000587832 CLTCL1P53675 1640 aa26.16■■□□□ 1.78
GCDH-206ENST00000587832 XRN1Q8IZH2 1706 aaKnown RBP26.16■■□□□ 1.78
GCDH-206ENST00000587832 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.16■■□□□ 1.78
GCDH-206ENST00000587832 NAIPQ13075 1403 aa26.15■■□□□ 1.78
GCDH-206ENST00000587832 KIF1BO60333 1816 aa26.14■■□□□ 1.78
GCDH-206ENST00000587832 SLAIN2Q9P270 581 aa26.12■■□□□ 1.77
GCDH-206ENST00000587832 NUTM2DQ5VT03 806 aaPredicted RBP26.11■■□□□ 1.77
GCDH-206ENST00000587832 COL16A1Q07092 1604 aaPredicted RBP26.1■■□□□ 1.77
GCDH-206ENST00000587832 NEXMIFQ5QGS0 1516 aa26.1■■□□□ 1.77
GCDH-206ENST00000587832 HFM1A2PYH4 1435 aa26.08■■□□□ 1.77
GCDH-206ENST00000587832 PTPRUQ92729 1446 aa26.08■■□□□ 1.77
GCDH-206ENST00000587832 AHDC1Q5TGY3 1603 aaPredicted RBP26.06■■□□□ 1.76
GCDH-206ENST00000587832 DCCP43146 1447 aa26.05■■□□□ 1.76
GCDH-206ENST00000587832 C19orf44Q9H6X5 657 aa26.04■■□□□ 1.76
GCDH-206ENST00000587832 RGS17Q9UGC6 210 aaPredicted RBP26.04■■□□□ 1.76
GCDH-206ENST00000587832 CADPS2Q86UW7 1296 aa26.03■■□□□ 1.76
GCDH-206ENST00000587832 AMOTL2Q9Y2J4 779 aa26.02■■□□□ 1.76
GCDH-206ENST00000587832 C14orf37Q86TY3 774 aa26.01■■□□□ 1.75
GCDH-206ENST00000587832 JCADQ9P266 1359 aa26.01■■□□□ 1.75
GCDH-206ENST00000587832 SETD1AO15047 1707 aaKnown RBP26■■□□□ 1.75
GCDH-206ENST00000587832 SHPRHQ149N8 1683 aa26■■□□□ 1.75
GCDH-206ENST00000587832 ZNF326Q5BKZ1 582 aaKnown RBP25.99■■□□□ 1.75
GCDH-206ENST00000587832 ATF3P18847 181 aa25.98■■□□□ 1.75
GCDH-206ENST00000587832 METP08581 1390 aa25.96■■□□□ 1.75
GCDH-206ENST00000587832 PPLO60437 1756 aa25.96■■□□□ 1.75
GCDH-206ENST00000587832 NALCNQ8IZF0 1738 aa25.96■■□□□ 1.75
GCDH-206ENST00000587832 NHSL1Q5SYE7 1610 aa25.94■■□□□ 1.74
GCDH-206ENST00000587832 ADGRL3Q9HAR2 1447 aa25.91■■□□□ 1.74
GCDH-206ENST00000587832 ASXL1Q8IXJ9 1541 aa25.91■■□□□ 1.74
GCDH-206ENST00000587832 MST1RQ04912 1400 aa25.9■■□□□ 1.74
GCDH-206ENST00000587832 PRAG1Q86YV5 1406 aa25.9■■□□□ 1.74
GCDH-206ENST00000587832 SPATA31A6Q5VVP1 1343 aa25.89■■□□□ 1.74
GCDH-206ENST00000587832 PTCH1Q13635 1447 aa25.88■■□□□ 1.73
GCDH-206ENST00000587832 TRIM52Q96A61 297 aa25.88■■□□□ 1.73
GCDH-206ENST00000587832 LRP6O75581 1613 aa25.88■■□□□ 1.73
GCDH-206ENST00000587832 BRINP3Q76B58 766 aa25.87■■□□□ 1.73
GCDH-206ENST00000587832 RPGRIP1LQ68CZ1 1315 aa25.87■■□□□ 1.73
GCDH-206ENST00000587832 POTEAQ6S8J7 498 aa25.86■■□□□ 1.73
GCDH-206ENST00000587832 SLC4A1APQ9BWU0 796 aaKnown RBP25.86■■□□□ 1.73
GCDH-206ENST00000587832 VGFO15240 615 aaPredicted RBP25.85■■□□□ 1.73
GCDH-206ENST00000587832 IFT172Q9UG01 1749 aa25.84■■□□□ 1.73
GCDH-206ENST00000587832 LAMC1P11047 1609 aa25.84■■□□□ 1.73
GCDH-206ENST00000587832 SETD5Q9C0A6 1442 aa25.82■■□□□ 1.72
GCDH-206ENST00000587832 ROBO2Q9HCK4 1378 aa25.76■■□□□ 1.71
GCDH-206ENST00000587832 CCDC144AA2RUR9 1427 aa25.76■■□□□ 1.71
GCDH-206ENST00000587832 C1orf167Q5SNV9 1468 aa25.74■■□□□ 1.71
GCDH-206ENST00000587832 SPATA31E1Q6ZUB1 1445 aa25.74■■□□□ 1.71
GCDH-206ENST00000587832 CDC42BPGQ6DT37 1551 aa25.72■■□□□ 1.71
GCDH-206ENST00000587832 KNDC1Q76NI1 1749 aa25.71■■□□□ 1.71
GCDH-206ENST00000587832 MEX3CQ5U5Q3 659 aaKnown RBP25.71■■□□□ 1.71
GCDH-206ENST00000587832 ACIN1Q9UKV3 1341 aaKnown RBP25.7■■□□□ 1.71
GCDH-206ENST00000587832 ZNF772Q68DY9 489 aaPredicted RBP25.7■■□□□ 1.7
GCDH-206ENST00000587832 FOXD1Q16676 465 aa25.69■■□□□ 1.7
GCDH-206ENST00000587832 LRRC59Q96AG4 307 aaKnown RBP25.69■■□□□ 1.7
GCDH-206ENST00000587832 ANKRD30BQ9BXX2 1392 aa25.69■■□□□ 1.7
GCDH-206ENST00000587832 TECPR2O15040 1411 aa25.68■■□□□ 1.7
GCDH-206ENST00000587832 MPHOSPH9Q99550 1183 aa25.67■■□□□ 1.7
GCDH-206ENST00000587832 PNPLA6Q8IY17 1366 aa25.67■■□□□ 1.7
GCDH-206ENST00000587832 PIK3C2GO75747 1445 aa25.64■■□□□ 1.7
GCDH-206ENST00000587832 ADGRF5Q8IZF2 1346 aa25.63■■□□□ 1.69
GCDH-206ENST00000587832 COL22A1Q8NFW1 1626 aaPredicted RBP25.63■■□□□ 1.69
GCDH-206ENST00000587832 CDK12Q9NYV4 1490 aaPredicted RBP25.62■■□□□ 1.69
GCDH-206ENST00000587832 NUTM2BA6NNL0 878 aaPredicted RBP25.61■■□□□ 1.69
GCDH-206ENST00000587832 NUTM2EB1AL46 878 aaPredicted RBP25.61■■□□□ 1.69
GCDH-206ENST00000587832 NUTM2AQ8IVF1 878 aaPredicted RBP25.61■■□□□ 1.69
GCDH-206ENST00000587832 DDX17Q92841 729 aaKnown RBP25.6■■□□□ 1.69
GCDH-206ENST00000587832 SOS2Q07890 1332 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms