RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 SCAF1Q9H7N4 1312 aaKnown RBP30.16■■■□□ 2.42
TRAPPC6A-203ENST00000587818 HFM1A2PYH4 1435 aa30.15■■■□□ 2.42
TRAPPC6A-203ENST00000587818 PPP1R15AO75807 674 aaPredicted RBP30.15■■■□□ 2.42
TRAPPC6A-203ENST00000587818 LRRC7Q96NW7 1537 aa30.13■■■□□ 2.41
TRAPPC6A-203ENST00000587818 HDGFP51858 240 aaKnown RBP30.13■■■□□ 2.41
TRAPPC6A-203ENST00000587818 TOM1O60784 492 aa30.12■■■□□ 2.41
TRAPPC6A-203ENST00000587818 ZFYVE9O95405 1425 aa30.12■■■□□ 2.41
TRAPPC6A-203ENST00000587818 KCNA6P17658 529 aa30.07■■■□□ 2.4
TRAPPC6A-203ENST00000587818 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.07■■■□□ 2.4
TRAPPC6A-203ENST00000587818 RBM33Q96EV2 1170 aaKnown RBP30.07■■■□□ 2.4
TRAPPC6A-203ENST00000587818 SLC4A1APQ9BWU0 796 aaKnown RBP30.07■■■□□ 2.4
TRAPPC6A-203ENST00000587818 SPHKAPQ2M3C7 1700 aa30.06■■■□□ 2.4
TRAPPC6A-203ENST00000587818 PLEKHG1Q9ULL1 1385 aa30.04■■■□□ 2.4
TRAPPC6A-203ENST00000587818 ZNF326Q5BKZ1 582 aaKnown RBP30.04■■■□□ 2.4
TRAPPC6A-203ENST00000587818 PROSER2Q86WR7 435 aaPredicted RBP30.03■■■□□ 2.4
TRAPPC6A-203ENST00000587818 FOXD1Q16676 465 aa30.02■■■□□ 2.4
TRAPPC6A-203ENST00000587818 ALKQ9UM73 1620 aa29.98■■■□□ 2.39
TRAPPC6A-203ENST00000587818 HSPA1LP34931 641 aa29.98■■■□□ 2.39
TRAPPC6A-203ENST00000587818 TBX22Q9Y458 520 aa29.98■■■□□ 2.39
TRAPPC6A-203ENST00000587818 XIRP1Q702N8 1843 aaKnown RBP29.97■■■□□ 2.39
TRAPPC6A-203ENST00000587818 TMEM94Q12767 1356 aa29.96■■■□□ 2.39
TRAPPC6A-203ENST00000587818 CLTCL1P53675 1640 aa29.96■■■□□ 2.39
TRAPPC6A-203ENST00000587818 ADAMTS13Q76LX8 1427 aa29.93■■■□□ 2.38
TRAPPC6A-203ENST00000587818 MPHOSPH9Q99550 1183 aa29.92■■■□□ 2.38
TRAPPC6A-203ENST00000587818 TRPM2O94759 1503 aa29.91■■■□□ 2.38
TRAPPC6A-203ENST00000587818 CHD2O14647 1828 aaKnown RBP29.89■■■□□ 2.38
TRAPPC6A-203ENST00000587818 KIF1BO60333 1816 aa29.87■■■□□ 2.37
TRAPPC6A-203ENST00000587818 SETD5Q9C0A6 1442 aa29.87■■■□□ 2.37
TRAPPC6A-203ENST00000587818 NWD1Q149M9 1564 aa29.86■■■□□ 2.37
TRAPPC6A-203ENST00000587818 DISP3Q9P2K9 1392 aa29.85■■■□□ 2.37
TRAPPC6A-203ENST00000587818 AMOTL2Q9Y2J4 779 aa29.83■■■□□ 2.37
TRAPPC6A-203ENST00000587818 NKTRP30414 1462 aaKnown RBP29.81■■■□□ 2.36
TRAPPC6A-203ENST00000587818 NEXMIFQ5QGS0 1516 aa29.8■■■□□ 2.36
TRAPPC6A-203ENST00000587818 PTPRUQ92729 1446 aa29.79■■■□□ 2.36
TRAPPC6A-203ENST00000587818 C14orf37Q86TY3 774 aa29.78■■■□□ 2.36
TRAPPC6A-203ENST00000587818 NRXN3Q9Y4C0 1643 aa29.77■■■□□ 2.36
TRAPPC6A-203ENST00000587818 DIP2AQ14689 1571 aa29.77■■■□□ 2.36
TRAPPC6A-203ENST00000587818 PIK3R4Q99570 1358 aa29.77■■■□□ 2.36
TRAPPC6A-203ENST00000587818 RAB3GAP2Q9H2M9 1393 aa29.77■■■□□ 2.36
TRAPPC6A-203ENST00000587818 RGL3Q3MIN7 710 aa29.76■■■□□ 2.35
TRAPPC6A-203ENST00000587818 METP08581 1390 aa29.76■■■□□ 2.35
TRAPPC6A-203ENST00000587818 MSH6P52701 1360 aa29.76■■■□□ 2.35
TRAPPC6A-203ENST00000587818 VGFO15240 615 aaPredicted RBP29.74■■■□□ 2.35
TRAPPC6A-203ENST00000587818 SETBP1Q9Y6X0 1596 aa29.73■■■□□ 2.35
TRAPPC6A-203ENST00000587818 RPGRIP1LQ68CZ1 1315 aa29.72■■■□□ 2.35
TRAPPC6A-203ENST00000587818 SLAIN2Q9P270 581 aa29.71■■■□□ 2.35
TRAPPC6A-203ENST00000587818 CCDC144AA2RUR9 1427 aa29.71■■■□□ 2.35
TRAPPC6A-203ENST00000587818 FAM135BQ49AJ0 1406 aa29.69■■■□□ 2.34
TRAPPC6A-203ENST00000587818 ILDR2Q71H61 639 aa29.68■■■□□ 2.34
TRAPPC6A-203ENST00000587818 ACIN1Q9UKV3 1341 aaKnown RBP29.68■■■□□ 2.34
TRAPPC6A-203ENST00000587818 C19orf44Q9H6X5 657 aa29.66■■■□□ 2.34
TRAPPC6A-203ENST00000587818 NCOA3Q9Y6Q9 1424 aa29.63■■■□□ 2.33
TRAPPC6A-203ENST00000587818 PPLO60437 1756 aa29.63■■■□□ 2.33
TRAPPC6A-203ENST00000587818 ADGRF5Q8IZF2 1346 aa29.63■■■□□ 2.33
TRAPPC6A-203ENST00000587818 ATF3P18847 181 aa29.62■■■□□ 2.33
TRAPPC6A-203ENST00000587818 ROBO1Q9Y6N7 1651 aa29.62■■■□□ 2.33
TRAPPC6A-203ENST00000587818 SPATA31E1Q6ZUB1 1445 aa29.62■■■□□ 2.33
TRAPPC6A-203ENST00000587818 XRN1Q8IZH2 1706 aaKnown RBP29.6■■■□□ 2.33
TRAPPC6A-203ENST00000587818 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.6■■■□□ 2.33
TRAPPC6A-203ENST00000587818 CADPS2Q86UW7 1296 aa29.59■■■□□ 2.33
TRAPPC6A-203ENST00000587818 MED1Q15648 1581 aaPredicted RBP29.54■■■□□ 2.32
TRAPPC6A-203ENST00000587818 HRCP23327 699 aa29.53■■■□□ 2.32
TRAPPC6A-203ENST00000587818 SETD1AO15047 1707 aaKnown RBP29.53■■■□□ 2.32
TRAPPC6A-203ENST00000587818 ANKRD30BQ9BXX2 1392 aa29.51■■■□□ 2.31
TRAPPC6A-203ENST00000587818 ROBO2Q9HCK4 1378 aa29.5■■■□□ 2.31
TRAPPC6A-203ENST00000587818 TMEM132EQ6IEE7 984 aa29.49■■■□□ 2.31
TRAPPC6A-203ENST00000587818 STK26Q9P289 416 aa29.49■■■□□ 2.31
TRAPPC6A-203ENST00000587818 IFT172Q9UG01 1749 aa29.47■■■□□ 2.31
TRAPPC6A-203ENST00000587818 BRINP3Q76B58 766 aa29.45■■■□□ 2.31
TRAPPC6A-203ENST00000587818 PHF23Q9BUL5 403 aaPredicted RBP29.45■■■□□ 2.31
TRAPPC6A-203ENST00000587818 PHLPP1O60346 1717 aa29.45■■■□□ 2.3
TRAPPC6A-203ENST00000587818 ADGRL3Q9HAR2 1447 aa29.43■■■□□ 2.3
TRAPPC6A-203ENST00000587818 NALCNQ8IZF0 1738 aa29.4■■■□□ 2.3
TRAPPC6A-203ENST00000587818 DCCP43146 1447 aa29.4■■■□□ 2.3
TRAPPC6A-203ENST00000587818 MST1RQ04912 1400 aa29.4■■■□□ 2.3
TRAPPC6A-203ENST00000587818 CFAP70Q5T0N1 1121 aa29.4■■■□□ 2.3
TRAPPC6A-203ENST00000587818 WAPLQ7Z5K2 1190 aa29.4■■■□□ 2.3
TRAPPC6A-203ENST00000587818 PTCH1Q13635 1447 aa29.39■■■□□ 2.3
TRAPPC6A-203ENST00000587818 KDM2AQ9Y2K7 1162 aa29.39■■■□□ 2.3
TRAPPC6A-203ENST00000587818 PIK3C2GO75747 1445 aa29.38■■■□□ 2.29
TRAPPC6A-203ENST00000587818 DDX17Q92841 729 aaKnown RBP29.38■■■□□ 2.29
TRAPPC6A-203ENST00000587818 C14orf93Q9H972 538 aaKnown RBP29.38■■■□□ 2.29
TRAPPC6A-203ENST00000587818 LRPPRCP42704 1394 aaKnown RBP29.35■■■□□ 2.29
TRAPPC6A-203ENST00000587818 DCAF11Q8TEB1 546 aa29.34■■■□□ 2.29
TRAPPC6A-203ENST00000587818 ASXL1Q8IXJ9 1541 aa29.34■■■□□ 2.29
TRAPPC6A-203ENST00000587818 COL16A1Q07092 1604 aaPredicted RBP29.34■■■□□ 2.29
TRAPPC6A-203ENST00000587818 RGS17Q9UGC6 210 aaPredicted RBP29.33■■■□□ 2.29
TRAPPC6A-203ENST00000587818 JCADQ9P266 1359 aa29.33■■■□□ 2.29
TRAPPC6A-203ENST00000587818 ORAI2Q96SN7 254 aa29.32■■■□□ 2.28
TRAPPC6A-203ENST00000587818 PRAG1Q86YV5 1406 aa29.31■■■□□ 2.28
TRAPPC6A-203ENST00000587818 ABCC11Q96J66 1382 aa29.31■■■□□ 2.28
TRAPPC6A-203ENST00000587818 PLEKHH1Q9ULM0 1364 aa29.31■■■□□ 2.28
TRAPPC6A-203ENST00000587818 SOCS7O14512 581 aa29.3■■■□□ 2.28
TRAPPC6A-203ENST00000587818 AHDC1Q5TGY3 1603 aaPredicted RBP29.3■■■□□ 2.28
TRAPPC6A-203ENST00000587818 C1orf167Q5SNV9 1468 aa29.29■■■□□ 2.28
TRAPPC6A-203ENST00000587818 YTHDC2Q9H6S0 1430 aaKnown RBP29.29■■■□□ 2.28
TRAPPC6A-203ENST00000587818 MYOM2P54296 1465 aa29.29■■■□□ 2.28
TRAPPC6A-203ENST00000587818 NRXN1Q9ULB1 1477 aa29.29■■■□□ 2.28
TRAPPC6A-203ENST00000587818 NUTM2FA1L443 756 aa29.28■■■□□ 2.28
TRAPPC6A-203ENST00000587818 DHX57Q6P158 1386 aaKnown RBP29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms