RNA–Protein interactions for RNA: ENST00000587600.1

LDLRAD4-210, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-210ENST00000587600 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.14■□□□□ 0.65
LDLRAD4-210ENST00000587600 VGFO15240 615 aaPredicted RBP19.13■□□□□ 0.65
LDLRAD4-210ENST00000587600 TMEM2Q9UHN6 1383 aa19.13■□□□□ 0.65
LDLRAD4-210ENST00000587600 SLIT1O75093 1534 aa19.13■□□□□ 0.65
LDLRAD4-210ENST00000587600 DCAF11Q8TEB1 546 aa19.12■□□□□ 0.65
LDLRAD4-210ENST00000587600 NEXMIFQ5QGS0 1516 aa19.11■□□□□ 0.65
LDLRAD4-210ENST00000587600 ARHGAP23Q9P227 1491 aa19.11■□□□□ 0.65
LDLRAD4-210ENST00000587600 PPP1R15AO75807 674 aaPredicted RBP19.11■□□□□ 0.65
LDLRAD4-210ENST00000587600 RIMS2Q9UQ26 1411 aa19.09■□□□□ 0.65
LDLRAD4-210ENST00000587600 NRXN1Q9ULB1 1477 aa19.09■□□□□ 0.65
LDLRAD4-210ENST00000587600 IFT172Q9UG01 1749 aa19.08■□□□□ 0.65
LDLRAD4-210ENST00000587600 EID1Q9Y6B2 187 aa19.08■□□□□ 0.64
LDLRAD4-210ENST00000587600 PPLO60437 1756 aa19.07■□□□□ 0.64
LDLRAD4-210ENST00000587600 PRAG1Q86YV5 1406 aa19.06■□□□□ 0.64
LDLRAD4-210ENST00000587600 PIK3C2GO75747 1445 aa19.04■□□□□ 0.64
LDLRAD4-210ENST00000587600 KDM2AQ9Y2K7 1162 aa19.04■□□□□ 0.64
LDLRAD4-210ENST00000587600 MYO5BQ9ULV0 1848 aa19.04■□□□□ 0.64
LDLRAD4-210ENST00000587600 LMTK3Q96Q04 1460 aa19.03■□□□□ 0.64
LDLRAD4-210ENST00000587600 ANKLE2Q86XL3 938 aa19.03■□□□□ 0.64
LDLRAD4-210ENST00000587600 SCAF11Q99590 1463 aaKnown RBP19.03■□□□□ 0.64
LDLRAD4-210ENST00000587600 TXNDC2Q86VQ3 553 aa19.02■□□□□ 0.64
LDLRAD4-210ENST00000587600 PLEKHG1Q9ULL1 1385 aa19.02■□□□□ 0.64
LDLRAD4-210ENST00000587600 ADGRF5Q8IZF2 1346 aa19■□□□□ 0.63
LDLRAD4-210ENST00000587600 LAMC1P11047 1609 aa18.99■□□□□ 0.63
LDLRAD4-210ENST00000587600 SETBP1Q9Y6X0 1596 aa18.98■□□□□ 0.63
LDLRAD4-210ENST00000587600 RALGAPBQ86X10 1494 aa18.98■□□□□ 0.63
LDLRAD4-210ENST00000587600 KIAA1210Q9ULL0 1709 aa18.98■□□□□ 0.63
LDLRAD4-210ENST00000587600 MED14O60244 1454 aa18.97■□□□□ 0.63
LDLRAD4-210ENST00000587600 LTKP29376 864 aa18.97■□□□□ 0.63
LDLRAD4-210ENST00000587600 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
LDLRAD4-210ENST00000587600 C14orf93Q9H972 538 aaKnown RBP18.97■□□□□ 0.63
LDLRAD4-210ENST00000587600 GPRASP1Q5JY77 1395 aa18.94■□□□□ 0.62
LDLRAD4-210ENST00000587600 DIP2AQ14689 1571 aa18.94■□□□□ 0.62
LDLRAD4-210ENST00000587600 TRPM1Q7Z4N2 1603 aa18.94■□□□□ 0.62
LDLRAD4-210ENST00000587600 NUTM2DQ5VT03 806 aaPredicted RBP18.94■□□□□ 0.62
LDLRAD4-210ENST00000587600 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
LDLRAD4-210ENST00000587600 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
LDLRAD4-210ENST00000587600 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
LDLRAD4-210ENST00000587600 TBX22Q9Y458 520 aa18.91■□□□□ 0.62
LDLRAD4-210ENST00000587600 ALKQ9UM73 1620 aa18.91■□□□□ 0.62
LDLRAD4-210ENST00000587600 CFAP70Q5T0N1 1121 aa18.9■□□□□ 0.62
LDLRAD4-210ENST00000587600 BCANQ96GW7 911 aa18.9■□□□□ 0.62
LDLRAD4-210ENST00000587600 PIK3R4Q99570 1358 aa18.9■□□□□ 0.62
LDLRAD4-210ENST00000587600 ADAMTS13Q76LX8 1427 aa18.9■□□□□ 0.62
LDLRAD4-210ENST00000587600 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.62
LDLRAD4-210ENST00000587600 HSPA2P54652 639 aa18.88■□□□□ 0.61
LDLRAD4-210ENST00000587600 ADGRB1O14514 1584 aa18.88■□□□□ 0.61
LDLRAD4-210ENST00000587600 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
LDLRAD4-210ENST00000587600 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
LDLRAD4-210ENST00000587600 IQGAP1P46940 1657 aa18.86■□□□□ 0.61
LDLRAD4-210ENST00000587600 NCKAP5LQ9HCH0 1330 aa18.85■□□□□ 0.61
LDLRAD4-210ENST00000587600 NBPF1Q3BBV0 1214 aa18.85■□□□□ 0.61
LDLRAD4-210ENST00000587600 EIF3AQ14152 1382 aaKnown RBP18.84■□□□□ 0.61
LDLRAD4-210ENST00000587600 SETD1AO15047 1707 aaKnown RBP18.84■□□□□ 0.61
LDLRAD4-210ENST00000587600 LRPPRCP42704 1394 aaKnown RBP18.82■□□□□ 0.6
LDLRAD4-210ENST00000587600 ASXL1Q8IXJ9 1541 aa18.82■□□□□ 0.6
LDLRAD4-210ENST00000587600 YTHDC2Q9H6S0 1430 aaKnown RBP18.82■□□□□ 0.6
LDLRAD4-210ENST00000587600 METP08581 1390 aa18.81■□□□□ 0.6
LDLRAD4-210ENST00000587600 ABCC11Q96J66 1382 aa18.81■□□□□ 0.6
LDLRAD4-210ENST00000587600 EIF4G2P78344 907 aaKnown RBP eCLIP18.81■□□□□ 0.6
LDLRAD4-210ENST00000587600 SLC26A8Q96RN1 970 aa18.81■□□□□ 0.6
LDLRAD4-210ENST00000587600 TECPR2O15040 1411 aa18.81■□□□□ 0.6
LDLRAD4-210ENST00000587600 SLC24A1O60721 1099 aa18.8■□□□□ 0.6
LDLRAD4-210ENST00000587600 SIRT1Q96EB6 747 aa18.8■□□□□ 0.6
LDLRAD4-210ENST00000587600 USP47Q96K76 1375 aa18.8■□□□□ 0.6
LDLRAD4-210ENST00000587600 DLC1Q96QB1 1528 aa18.79■□□□□ 0.6
LDLRAD4-210ENST00000587600 STRCQ7RTU9 1775 aa18.79■□□□□ 0.6
LDLRAD4-210ENST00000587600 TMEM132EQ6IEE7 984 aa18.79■□□□□ 0.6
LDLRAD4-210ENST00000587600 FAM135BQ49AJ0 1406 aa18.76■□□□□ 0.59
LDLRAD4-210ENST00000587600 PTCH1Q13635 1447 aa18.75■□□□□ 0.59
LDLRAD4-210ENST00000587600 KNDC1Q76NI1 1749 aa18.75■□□□□ 0.59
LDLRAD4-210ENST00000587600 CPS1P31327 1500 aa18.74■□□□□ 0.59
LDLRAD4-210ENST00000587600 SBNO2Q9Y2G9 1366 aa18.74■□□□□ 0.59
LDLRAD4-210ENST00000587600 KCNA6P17658 529 aa18.74■□□□□ 0.59
LDLRAD4-210ENST00000587600 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
LDLRAD4-210ENST00000587600 NWD1Q149M9 1564 aa18.73■□□□□ 0.59
LDLRAD4-210ENST00000587600 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
LDLRAD4-210ENST00000587600 AMOTL2Q9Y2J4 779 aa18.73■□□□□ 0.59
LDLRAD4-210ENST00000587600 XRN1Q8IZH2 1706 aaKnown RBP18.73■□□□□ 0.59
LDLRAD4-210ENST00000587600 NKTRP30414 1462 aaKnown RBP18.72■□□□□ 0.59
LDLRAD4-210ENST00000587600 PTPRUQ92729 1446 aa18.72■□□□□ 0.59
LDLRAD4-210ENST00000587600 CENPJQ9HC77 1338 aaPredicted RBP18.72■□□□□ 0.59
LDLRAD4-210ENST00000587600 HSPA5P11021 654 aaKnown RBP18.71■□□□□ 0.59
LDLRAD4-210ENST00000587600 STK26Q9P289 416 aa18.71■□□□□ 0.59
LDLRAD4-210ENST00000587600 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
LDLRAD4-210ENST00000587600 CHD2O14647 1828 aaKnown RBP18.7■□□□□ 0.58
LDLRAD4-210ENST00000587600 ARHGEF28Q8N1W1 1705 aaKnown RBP18.69■□□□□ 0.58
LDLRAD4-210ENST00000587600 POGKQ9P215 609 aa18.68■□□□□ 0.58
LDLRAD4-210ENST00000587600 PRAM1Q96QH2 718 aa18.67■□□□□ 0.58
LDLRAD4-210ENST00000587600 ROBO2Q9HCK4 1378 aa18.67■□□□□ 0.58
LDLRAD4-210ENST00000587600 NCOA3Q9Y6Q9 1424 aa18.66■□□□□ 0.58
LDLRAD4-210ENST00000587600 TESK2Q96S53 571 aa18.65■□□□□ 0.58
LDLRAD4-210ENST00000587600 CDCA8Q53HL2 280 aa18.64■□□□□ 0.57
LDLRAD4-210ENST00000587600 TMF1P82094 1093 aa18.63■□□□□ 0.57
LDLRAD4-210ENST00000587600 PUS7Q96PZ0 661 aaKnown RBP18.62■□□□□ 0.57
LDLRAD4-210ENST00000587600 QRICH2Q9H0J4 1663 aa18.61■□□□□ 0.57
LDLRAD4-210ENST00000587600 ZNF316A6NFI3 1004 aaPredicted RBP18.61■□□□□ 0.57
LDLRAD4-210ENST00000587600 ADGRB2O60241 1585 aa18.6■□□□□ 0.57
LDLRAD4-210ENST00000587600 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
LDLRAD4-210ENST00000587600 EVC2Q86UK5 1308 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms