RNA–Protein interactions for RNA: ENST00000587421.5

SMAD2-210, Transcript of SMAD family member 2, humanhuman

TSL 4

Gene SMAD2, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-210ENST00000587421 PIK3C2BO00750 1634 aa21.14■□□□□ 0.97
SMAD2-210ENST00000587421 RPRD2Q5VT52 1461 aaKnown RBP21.13■□□□□ 0.97
SMAD2-210ENST00000587421 JCADQ9P266 1359 aa21.13■□□□□ 0.97
SMAD2-210ENST00000587421 NKTRP30414 1462 aaKnown RBP21.13■□□□□ 0.97
SMAD2-210ENST00000587421 TET3O43151 1660 aa21.11■□□□□ 0.97
SMAD2-210ENST00000587421 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMAD2-210ENST00000587421 TBX22Q9Y458 520 aa21.1■□□□□ 0.97
SMAD2-210ENST00000587421 NWD1Q149M9 1564 aa21.1■□□□□ 0.97
SMAD2-210ENST00000587421 RBM33Q96EV2 1170 aaKnown RBP21.09■□□□□ 0.97
SMAD2-210ENST00000587421 PHLPP1O60346 1717 aa21.09■□□□□ 0.97
SMAD2-210ENST00000587421 PPP1R15AO75807 674 aaPredicted RBP21.08■□□□□ 0.97
SMAD2-210ENST00000587421 UPF1Q92900 1129 aaKnown RBP eCLIP21.08■□□□□ 0.97
SMAD2-210ENST00000587421 ROCK1Q13464 1354 aa21.08■□□□□ 0.96
SMAD2-210ENST00000587421 MSH6P52701 1360 aa21.07■□□□□ 0.96
SMAD2-210ENST00000587421 SLAIN2Q9P270 581 aa21.06■□□□□ 0.96
SMAD2-210ENST00000587421 PLEKHG1Q9ULL1 1385 aa21.06■□□□□ 0.96
SMAD2-210ENST00000587421 ADGRB3O60242 1522 aa21.05■□□□□ 0.96
SMAD2-210ENST00000587421 CHGAP10645 457 aaKnown RBP21.05■□□□□ 0.96
SMAD2-210ENST00000587421 ZFYVE9O95405 1425 aa21.04■□□□□ 0.96
SMAD2-210ENST00000587421 ZNF772Q68DY9 489 aaPredicted RBP21.04■□□□□ 0.96
SMAD2-210ENST00000587421 COL16A1Q07092 1604 aaPredicted RBP21.04■□□□□ 0.96
SMAD2-210ENST00000587421 RIMS2Q9UQ26 1411 aa21.04■□□□□ 0.96
SMAD2-210ENST00000587421 SPATA31A6Q5VVP1 1343 aa21.04■□□□□ 0.96
SMAD2-210ENST00000587421 NUP155O75694 1391 aa20.99■□□□□ 0.95
SMAD2-210ENST00000587421 NCOA3Q9Y6Q9 1424 aa20.99■□□□□ 0.95
SMAD2-210ENST00000587421 LRP6O75581 1613 aa20.99■□□□□ 0.95
SMAD2-210ENST00000587421 CDK12Q9NYV4 1490 aaPredicted RBP20.98■□□□□ 0.95
SMAD2-210ENST00000587421 ITGAEP38570 1179 aa20.97■□□□□ 0.95
SMAD2-210ENST00000587421 NUTM2DQ5VT03 806 aaPredicted RBP20.96■□□□□ 0.95
SMAD2-210ENST00000587421 C19orf44Q9H6X5 657 aa20.96■□□□□ 0.95
SMAD2-210ENST00000587421 PIK3R4Q99570 1358 aa20.96■□□□□ 0.95
SMAD2-210ENST00000587421 MEX3CQ5U5Q3 659 aaKnown RBP20.95■□□□□ 0.94
SMAD2-210ENST00000587421 SHPRHQ149N8 1683 aa20.95■□□□□ 0.94
SMAD2-210ENST00000587421 CADPS2Q86UW7 1296 aa20.94■□□□□ 0.94
SMAD2-210ENST00000587421 TRIM52Q96A61 297 aa20.94■□□□□ 0.94
SMAD2-210ENST00000587421 AHDC1Q5TGY3 1603 aaPredicted RBP20.93■□□□□ 0.94
SMAD2-210ENST00000587421 C14orf37Q86TY3 774 aa20.93■□□□□ 0.94
SMAD2-210ENST00000587421 TMEM131LA2VDJ0 1609 aa20.93■□□□□ 0.94
SMAD2-210ENST00000587421 CHD2O14647 1828 aaKnown RBP20.92■□□□□ 0.94
SMAD2-210ENST00000587421 RXRBP28702 533 aa20.92■□□□□ 0.94
SMAD2-210ENST00000587421 ADAMTS13Q76LX8 1427 aa20.91■□□□□ 0.94
SMAD2-210ENST00000587421 AMOTL2Q9Y2J4 779 aa20.91■□□□□ 0.94
SMAD2-210ENST00000587421 UNC13BO14795 1591 aa20.9■□□□□ 0.94
SMAD2-210ENST00000587421 ATF3P18847 181 aa20.9■□□□□ 0.94
SMAD2-210ENST00000587421 PPARGC1BQ86YN6 1023 aaKnown RBP20.9■□□□□ 0.94
SMAD2-210ENST00000587421 GCC2Q8IWJ2 1684 aa20.85■□□□□ 0.93
SMAD2-210ENST00000587421 ZNF326Q5BKZ1 582 aaKnown RBP20.84■□□□□ 0.93
SMAD2-210ENST00000587421 DIP2AQ14689 1571 aa20.84■□□□□ 0.93
SMAD2-210ENST00000587421 IQGAP3Q86VI3 1631 aa20.83■□□□□ 0.93
SMAD2-210ENST00000587421 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.82■□□□□ 0.92
SMAD2-210ENST00000587421 E9PCH4 1651 aa20.82■□□□□ 0.92
SMAD2-210ENST00000587421 PTPRUQ92729 1446 aa20.79■□□□□ 0.92
SMAD2-210ENST00000587421 BRINP3Q76B58 766 aa20.78■□□□□ 0.92
SMAD2-210ENST00000587421 SRCAPQ6ZRS2 3230 aa20.78■□□□□ 0.92
SMAD2-210ENST00000587421 AFF2P51816 1311 aa20.78■□□□□ 0.92
SMAD2-210ENST00000587421 TRPM2O94759 1503 aa20.76■□□□□ 0.91
SMAD2-210ENST00000587421 RGS12O14924 1447 aa20.76■□□□□ 0.91
SMAD2-210ENST00000587421 DCCP43146 1447 aa20.76■□□□□ 0.91
SMAD2-210ENST00000587421 SETD5Q9C0A6 1442 aa20.76■□□□□ 0.91
SMAD2-210ENST00000587421 METP08581 1390 aa20.75■□□□□ 0.91
SMAD2-210ENST00000587421 MYO5BQ9ULV0 1848 aa20.75■□□□□ 0.91
SMAD2-210ENST00000587421 VGFO15240 615 aaPredicted RBP20.74■□□□□ 0.91
SMAD2-210ENST00000587421 RBM6P78332 1123 aaKnown RBP20.74■□□□□ 0.91
SMAD2-210ENST00000587421 RRBP1Q9P2E9 1410 aaKnown RBP20.73■□□□□ 0.91
SMAD2-210ENST00000587421 NUTM2BA6NNL0 878 aaPredicted RBP20.73■□□□□ 0.91
SMAD2-210ENST00000587421 NUTM2EB1AL46 878 aaPredicted RBP20.73■□□□□ 0.91
SMAD2-210ENST00000587421 NUTM2AQ8IVF1 878 aaPredicted RBP20.73■□□□□ 0.91
SMAD2-210ENST00000587421 FOXD1Q16676 465 aa20.72■□□□□ 0.91
SMAD2-210ENST00000587421 ASXL1Q8IXJ9 1541 aa20.72■□□□□ 0.91
SMAD2-210ENST00000587421 NAIPQ13075 1403 aa20.71■□□□□ 0.91
SMAD2-210ENST00000587421 LRRC59Q96AG4 307 aaKnown RBP20.71■□□□□ 0.91
SMAD2-210ENST00000587421 SETBP1Q9Y6X0 1596 aa20.7■□□□□ 0.9
SMAD2-210ENST00000587421 RPGRIP1LQ68CZ1 1315 aa20.7■□□□□ 0.9
SMAD2-210ENST00000587421 NHSL1Q5SYE7 1610 aa20.7■□□□□ 0.9
SMAD2-210ENST00000587421 QTRT2Q9H974 415 aaKnown RBP20.68■□□□□ 0.9
SMAD2-210ENST00000587421 ATAD2Q6PL18 1390 aa20.68■□□□□ 0.9
SMAD2-210ENST00000587421 SLC4A1APQ9BWU0 796 aaKnown RBP20.67■□□□□ 0.9
SMAD2-210ENST00000587421 MST1RQ04912 1400 aa20.65■□□□□ 0.9
SMAD2-210ENST00000587421 NGLY1Q96IV0 654 aa20.65■□□□□ 0.9
SMAD2-210ENST00000587421 C8orf37Q96NL8 207 aa20.65■□□□□ 0.9
SMAD2-210ENST00000587421 PNPLA6Q8IY17 1366 aa20.63■□□□□ 0.89
SMAD2-210ENST00000587421 ZRANB1Q9UGI0 708 aa20.63■□□□□ 0.89
SMAD2-210ENST00000587421 NRXN3Q9Y4C0 1643 aa20.62■□□□□ 0.89
SMAD2-210ENST00000587421 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
SMAD2-210ENST00000587421 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
SMAD2-210ENST00000587421 XRN1Q8IZH2 1706 aaKnown RBP20.61■□□□□ 0.89
SMAD2-210ENST00000587421 NEXMIFQ5QGS0 1516 aa20.6■□□□□ 0.89
SMAD2-210ENST00000587421 SPHKAPQ2M3C7 1700 aa20.6■□□□□ 0.89
SMAD2-210ENST00000587421 DDX17Q92841 729 aaKnown RBP20.59■□□□□ 0.89
SMAD2-210ENST00000587421 CLTCL1P53675 1640 aa20.57■□□□□ 0.88
SMAD2-210ENST00000587421 CCDC125Q86Z20 511 aa20.56■□□□□ 0.88
SMAD2-210ENST00000587421 ROBO2Q9HCK4 1378 aa20.56■□□□□ 0.88
SMAD2-210ENST00000587421 C1orf167Q5SNV9 1468 aa20.56■□□□□ 0.88
SMAD2-210ENST00000587421 PTCH1Q13635 1447 aa20.55■□□□□ 0.88
SMAD2-210ENST00000587421 ORAI2Q96SN7 254 aa20.55■□□□□ 0.88
SMAD2-210ENST00000587421 LAMC1P11047 1609 aa20.55■□□□□ 0.88
SMAD2-210ENST00000587421 SOS2Q07890 1332 aaPredicted RBP20.54■□□□□ 0.88
SMAD2-210ENST00000587421 TRPC5Q9UL62 973 aaPredicted RBP20.54■□□□□ 0.88
SMAD2-210ENST00000587421 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
SMAD2-210ENST00000587421 MPHOSPH9Q99550 1183 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms