RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
PRKCSH-204ENST00000587290 SLC52A1Q9NWF4 448 aa23.41■■□□□ 1.34
PRKCSH-204ENST00000587290 ZFYVE9O95405 1425 aa23.4■■□□□ 1.34
PRKCSH-204ENST00000587290 TMEM94Q12767 1356 aa23.4■■□□□ 1.34
PRKCSH-204ENST00000587290 NWD1Q149M9 1564 aa23.39■■□□□ 1.33
PRKCSH-204ENST00000587290 ROCK1Q13464 1354 aa23.39■■□□□ 1.33
PRKCSH-204ENST00000587290 BCANQ96GW7 911 aa23.38■■□□□ 1.33
PRKCSH-204ENST00000587290 RIMS2Q9UQ26 1411 aa23.37■■□□□ 1.33
PRKCSH-204ENST00000587290 KCNA6P17658 529 aa23.36■■□□□ 1.33
PRKCSH-204ENST00000587290 CHGAP10645 457 aaKnown RBP23.35■■□□□ 1.33
PRKCSH-204ENST00000587290 CHD2O14647 1828 aaKnown RBP23.35■■□□□ 1.33
PRKCSH-204ENST00000587290 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.33
PRKCSH-204ENST00000587290 NUTM2DQ5VT03 806 aaPredicted RBP23.33■■□□□ 1.33
PRKCSH-204ENST00000587290 PROSER2Q86WR7 435 aaPredicted RBP23.33■■□□□ 1.33
PRKCSH-204ENST00000587290 NKTRP30414 1462 aaKnown RBP23.32■■□□□ 1.32
PRKCSH-204ENST00000587290 PLEKHG1Q9ULL1 1385 aa23.32■■□□□ 1.32
PRKCSH-204ENST00000587290 NUP155O75694 1391 aa23.31■■□□□ 1.32
PRKCSH-204ENST00000587290 PPP1R15AO75807 674 aaPredicted RBP23.31■■□□□ 1.32
PRKCSH-204ENST00000587290 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
PRKCSH-204ENST00000587290 SPHKAPQ2M3C7 1700 aa23.28■■□□□ 1.32
PRKCSH-204ENST00000587290 FAM135BQ49AJ0 1406 aa23.26■■□□□ 1.31
PRKCSH-204ENST00000587290 ADAMTS13Q76LX8 1427 aa23.25■■□□□ 1.31
PRKCSH-204ENST00000587290 MSH6P52701 1360 aa23.23■■□□□ 1.31
PRKCSH-204ENST00000587290 PHLPP1O60346 1717 aa23.19■■□□□ 1.3
PRKCSH-204ENST00000587290 DIP2AQ14689 1571 aa23.19■■□□□ 1.3
PRKCSH-204ENST00000587290 HDGFP51858 240 aaKnown RBP23.19■■□□□ 1.3
PRKCSH-204ENST00000587290 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
PRKCSH-204ENST00000587290 NRXN3Q9Y4C0 1643 aa23.19■■□□□ 1.3
PRKCSH-204ENST00000587290 TBX22Q9Y458 520 aa23.18■■□□□ 1.3
PRKCSH-204ENST00000587290 RRBP1Q9P2E9 1410 aaKnown RBP23.17■■□□□ 1.3
PRKCSH-204ENST00000587290 CLTCL1P53675 1640 aa23.17■■□□□ 1.3
PRKCSH-204ENST00000587290 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.16■■□□□ 1.3
PRKCSH-204ENST00000587290 RGS17Q9UGC6 210 aaPredicted RBP23.16■■□□□ 1.3
PRKCSH-204ENST00000587290 PTPRUQ92729 1446 aa23.15■■□□□ 1.3
PRKCSH-204ENST00000587290 TRPM2O94759 1503 aa23.14■■□□□ 1.3
PRKCSH-204ENST00000587290 SLAIN2Q9P270 581 aa23.14■■□□□ 1.29
PRKCSH-204ENST00000587290 NAIPQ13075 1403 aa23.14■■□□□ 1.29
PRKCSH-204ENST00000587290 C14orf37Q86TY3 774 aa23.13■■□□□ 1.29
PRKCSH-204ENST00000587290 COL16A1Q07092 1604 aaPredicted RBP23.11■■□□□ 1.29
PRKCSH-204ENST00000587290 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
PRKCSH-204ENST00000587290 KIF1BO60333 1816 aa23.1■■□□□ 1.29
PRKCSH-204ENST00000587290 SETBP1Q9Y6X0 1596 aa23.1■■□□□ 1.29
PRKCSH-204ENST00000587290 ZNF326Q5BKZ1 582 aaKnown RBP23.09■■□□□ 1.29
PRKCSH-204ENST00000587290 NEXMIFQ5QGS0 1516 aa23.08■■□□□ 1.29
PRKCSH-204ENST00000587290 AMOTL2Q9Y2J4 779 aa23.08■■□□□ 1.29
PRKCSH-204ENST00000587290 PIK3R4Q99570 1358 aa23.08■■□□□ 1.29
PRKCSH-204ENST00000587290 NCOA3Q9Y6Q9 1424 aa23.05■■□□□ 1.28
PRKCSH-204ENST00000587290 METP08581 1390 aa23.04■■□□□ 1.28
PRKCSH-204ENST00000587290 POTEAQ6S8J7 498 aa23.03■■□□□ 1.28
PRKCSH-204ENST00000587290 C19orf44Q9H6X5 657 aa23.02■■□□□ 1.28
PRKCSH-204ENST00000587290 ATF3P18847 181 aa23.01■■□□□ 1.27
PRKCSH-204ENST00000587290 JCADQ9P266 1359 aa23.01■■□□□ 1.27
PRKCSH-204ENST00000587290 AHDC1Q5TGY3 1603 aaPredicted RBP23■■□□□ 1.27
PRKCSH-204ENST00000587290 HFM1A2PYH4 1435 aa23■■□□□ 1.27
PRKCSH-204ENST00000587290 NALCNQ8IZF0 1738 aa23■■□□□ 1.27
PRKCSH-204ENST00000587290 CADPS2Q86UW7 1296 aa23■■□□□ 1.27
PRKCSH-204ENST00000587290 TRIM52Q96A61 297 aa23■■□□□ 1.27
PRKCSH-204ENST00000587290 LRP6O75581 1613 aa23■■□□□ 1.27
PRKCSH-204ENST00000587290 SETD1AO15047 1707 aaKnown RBP22.99■■□□□ 1.27
PRKCSH-204ENST00000587290 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
PRKCSH-204ENST00000587290 BRINP3Q76B58 766 aa22.95■■□□□ 1.26
PRKCSH-204ENST00000587290 ASXL1Q8IXJ9 1541 aa22.94■■□□□ 1.26
PRKCSH-204ENST00000587290 PPLO60437 1756 aa22.94■■□□□ 1.26
PRKCSH-204ENST00000587290 DCCP43146 1447 aa22.93■■□□□ 1.26
PRKCSH-204ENST00000587290 MST1RQ04912 1400 aa22.93■■□□□ 1.26
PRKCSH-204ENST00000587290 FOXD1Q16676 465 aa22.93■■□□□ 1.26
PRKCSH-204ENST00000587290 SLC4A1APQ9BWU0 796 aaKnown RBP22.92■■□□□ 1.26
PRKCSH-204ENST00000587290 NHSL1Q5SYE7 1610 aa22.92■■□□□ 1.26
PRKCSH-204ENST00000587290 ADGRL3Q9HAR2 1447 aa22.91■■□□□ 1.26
PRKCSH-204ENST00000587290 DDX17Q92841 729 aaKnown RBP22.88■■□□□ 1.25
PRKCSH-204ENST00000587290 SPATA31A6Q5VVP1 1343 aa22.86■■□□□ 1.25
PRKCSH-204ENST00000587290 MEX3CQ5U5Q3 659 aaKnown RBP22.86■■□□□ 1.25
PRKCSH-204ENST00000587290 ROBO2Q9HCK4 1378 aa22.86■■□□□ 1.25
PRKCSH-204ENST00000587290 NUTM2BA6NNL0 878 aaPredicted RBP22.84■■□□□ 1.25
PRKCSH-204ENST00000587290 NUTM2EB1AL46 878 aaPredicted RBP22.84■■□□□ 1.25
PRKCSH-204ENST00000587290 NUTM2AQ8IVF1 878 aaPredicted RBP22.84■■□□□ 1.25
PRKCSH-204ENST00000587290 PTCH1Q13635 1447 aa22.82■■□□□ 1.24
PRKCSH-204ENST00000587290 IFT172Q9UG01 1749 aa22.82■■□□□ 1.24
PRKCSH-204ENST00000587290 VGFO15240 615 aaPredicted RBP22.81■■□□□ 1.24
PRKCSH-204ENST00000587290 SETD5Q9C0A6 1442 aa22.8■■□□□ 1.24
PRKCSH-204ENST00000587290 C1orf167Q5SNV9 1468 aa22.79■■□□□ 1.24
PRKCSH-204ENST00000587290 RPGRIP1LQ68CZ1 1315 aa22.78■■□□□ 1.24
PRKCSH-204ENST00000587290 CCDC144AA2RUR9 1427 aa22.77■■□□□ 1.24
PRKCSH-204ENST00000587290 ADGRF5Q8IZF2 1346 aa22.77■■□□□ 1.24
PRKCSH-204ENST00000587290 RGL3Q3MIN7 710 aa22.76■■□□□ 1.23
PRKCSH-204ENST00000587290 PRAG1Q86YV5 1406 aa22.75■■□□□ 1.23
PRKCSH-204ENST00000587290 PNPLA6Q8IY17 1366 aa22.75■■□□□ 1.23
PRKCSH-204ENST00000587290 SPATA31E1Q6ZUB1 1445 aa22.74■■□□□ 1.23
PRKCSH-204ENST00000587290 ORAI2Q96SN7 254 aa22.74■■□□□ 1.23
PRKCSH-204ENST00000587290 MPHOSPH9Q99550 1183 aa22.74■■□□□ 1.23
PRKCSH-204ENST00000587290 LAMC1P11047 1609 aa22.74■■□□□ 1.23
PRKCSH-204ENST00000587290 ZNF772Q68DY9 489 aaPredicted RBP22.72■■□□□ 1.23
PRKCSH-204ENST00000587290 LRRC59Q96AG4 307 aaKnown RBP22.71■■□□□ 1.23
PRKCSH-204ENST00000587290 AFF2P51816 1311 aa22.71■■□□□ 1.23
PRKCSH-204ENST00000587290 STK26Q9P289 416 aa22.7■■□□□ 1.22
PRKCSH-204ENST00000587290 CDC42BPGQ6DT37 1551 aa22.69■■□□□ 1.22
PRKCSH-204ENST00000587290 C8orf37Q96NL8 207 aa22.68■■□□□ 1.22
PRKCSH-204ENST00000587290 KNDC1Q76NI1 1749 aa22.68■■□□□ 1.22
PRKCSH-204ENST00000587290 TMEM132EQ6IEE7 984 aa22.67■■□□□ 1.22
PRKCSH-204ENST00000587290 WAPLQ7Z5K2 1190 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms