RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 SLAIN2Q9P270 581 aa23.01■■□□□ 1.27
LRFN3-203ENST00000587257 LOC105371045A0A1W2PR82 267 aa22.99■■□□□ 1.27
LRFN3-203ENST00000587257 CHIC2Q9UKJ5 165 aa22.99■■□□□ 1.27
LRFN3-203ENST00000587257 APLP2Q06481 763 aa22.98■■□□□ 1.27
LRFN3-203ENST00000587257 PLEKHG1Q9ULL1 1385 aa22.96■■□□□ 1.27
LRFN3-203ENST00000587257 RPRD2Q5VT52 1461 aaKnown RBP22.96■■□□□ 1.27
LRFN3-203ENST00000587257 PHLPP1O60346 1717 aa22.95■■□□□ 1.26
LRFN3-203ENST00000587257 PPP1R15AO75807 674 aaPredicted RBP22.95■■□□□ 1.26
LRFN3-203ENST00000587257 ZFYVE9O95405 1425 aa22.95■■□□□ 1.26
LRFN3-203ENST00000587257 HDGFP51858 240 aaKnown RBP22.92■■□□□ 1.26
LRFN3-203ENST00000587257 RIMS2Q9UQ26 1411 aa22.91■■□□□ 1.26
LRFN3-203ENST00000587257 SETD1AO15047 1707 aaKnown RBP22.91■■□□□ 1.26
LRFN3-203ENST00000587257 ADGRL2O95490 1459 aa22.91■■□□□ 1.26
LRFN3-203ENST00000587257 NCOA3Q9Y6Q9 1424 aa22.91■■□□□ 1.26
LRFN3-203ENST00000587257 COL16A1Q07092 1604 aaPredicted RBP22.9■■□□□ 1.26
LRFN3-203ENST00000587257 SPATA31A6Q5VVP1 1343 aa22.9■■□□□ 1.26
LRFN3-203ENST00000587257 C14orf37Q86TY3 774 aa22.89■■□□□ 1.25
LRFN3-203ENST00000587257 TBX22Q9Y458 520 aa22.88■■□□□ 1.25
LRFN3-203ENST00000587257 ANKRD50Q9ULJ7 1429 aa22.88■■□□□ 1.25
LRFN3-203ENST00000587257 MEX3CQ5U5Q3 659 aaKnown RBP22.87■■□□□ 1.25
LRFN3-203ENST00000587257 LRP6O75581 1613 aa22.86■■□□□ 1.25
LRFN3-203ENST00000587257 ZNF772Q68DY9 489 aaPredicted RBP22.86■■□□□ 1.25
LRFN3-203ENST00000587257 CADPS2Q86UW7 1296 aa22.85■■□□□ 1.25
LRFN3-203ENST00000587257 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.85■■□□□ 1.25
LRFN3-203ENST00000587257 TMEM131LA2VDJ0 1609 aa22.84■■□□□ 1.25
LRFN3-203ENST00000587257 CHD2O14647 1828 aaKnown RBP22.84■■□□□ 1.25
LRFN3-203ENST00000587257 GCC2Q8IWJ2 1684 aa22.83■■□□□ 1.24
LRFN3-203ENST00000587257 ATF3P18847 181 aa22.82■■□□□ 1.24
LRFN3-203ENST00000587257 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
LRFN3-203ENST00000587257 AHDC1Q5TGY3 1603 aaPredicted RBP22.82■■□□□ 1.24
LRFN3-203ENST00000587257 PIK3R4Q99570 1358 aa22.81■■□□□ 1.24
LRFN3-203ENST00000587257 CHGAP10645 457 aaKnown RBP22.81■■□□□ 1.24
LRFN3-203ENST00000587257 ADAMTS13Q76LX8 1427 aa22.81■■□□□ 1.24
LRFN3-203ENST00000587257 DIP2AQ14689 1571 aa22.8■■□□□ 1.24
LRFN3-203ENST00000587257 FAM50AQ14320 339 aaKnown RBP22.8■■□□□ 1.24
LRFN3-203ENST00000587257 TRIM52Q96A61 297 aa22.8■■□□□ 1.24
LRFN3-203ENST00000587257 UPF1Q92900 1129 aaKnown RBP eCLIP22.78■■□□□ 1.24
LRFN3-203ENST00000587257 MYO5BQ9ULV0 1848 aa22.77■■□□□ 1.24
LRFN3-203ENST00000587257 NUTM2DQ5VT03 806 aaPredicted RBP22.76■■□□□ 1.23
LRFN3-203ENST00000587257 SHPRHQ149N8 1683 aa22.76■■□□□ 1.23
LRFN3-203ENST00000587257 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.75■■□□□ 1.23
LRFN3-203ENST00000587257 TRPM2O94759 1503 aa22.74■■□□□ 1.23
LRFN3-203ENST00000587257 RXRBP28702 533 aa22.74■■□□□ 1.23
LRFN3-203ENST00000587257 UNC13BO14795 1591 aa22.74■■□□□ 1.23
LRFN3-203ENST00000587257 BRINP3Q76B58 766 aa22.73■■□□□ 1.23
LRFN3-203ENST00000587257 DCCP43146 1447 aa22.72■■□□□ 1.23
LRFN3-203ENST00000587257 NUTM2BA6NNL0 878 aaPredicted RBP22.71■■□□□ 1.23
LRFN3-203ENST00000587257 NUTM2EB1AL46 878 aaPredicted RBP22.71■■□□□ 1.23
LRFN3-203ENST00000587257 NUTM2AQ8IVF1 878 aaPredicted RBP22.71■■□□□ 1.23
LRFN3-203ENST00000587257 AMOTL2Q9Y2J4 779 aa22.71■■□□□ 1.23
LRFN3-203ENST00000587257 CDK12Q9NYV4 1490 aaPredicted RBP22.71■■□□□ 1.23
LRFN3-203ENST00000587257 ASXL1Q8IXJ9 1541 aa22.68■■□□□ 1.22
LRFN3-203ENST00000587257 PTPRUQ92729 1446 aa22.68■■□□□ 1.22
LRFN3-203ENST00000587257 E9PCH4 1651 aa22.68■■□□□ 1.22
LRFN3-203ENST00000587257 SETD5Q9C0A6 1442 aa22.66■■□□□ 1.22
LRFN3-203ENST00000587257 AFF2P51816 1311 aa22.66■■□□□ 1.22
LRFN3-203ENST00000587257 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.22
LRFN3-203ENST00000587257 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
LRFN3-203ENST00000587257 MST1RQ04912 1400 aa22.63■■□□□ 1.21
LRFN3-203ENST00000587257 XRN1Q8IZH2 1706 aaKnown RBP22.61■■□□□ 1.21
LRFN3-203ENST00000587257 LRRC59Q96AG4 307 aaKnown RBP22.61■■□□□ 1.21
LRFN3-203ENST00000587257 SETBP1Q9Y6X0 1596 aa22.61■■□□□ 1.21
LRFN3-203ENST00000587257 NUP155O75694 1391 aa22.61■■□□□ 1.21
LRFN3-203ENST00000587257 NHSL1Q5SYE7 1610 aa22.58■■□□□ 1.21
LRFN3-203ENST00000587257 C8orf37Q96NL8 207 aa22.58■■□□□ 1.21
LRFN3-203ENST00000587257 RGS12O14924 1447 aa22.57■■□□□ 1.2
LRFN3-203ENST00000587257 NRXN3Q9Y4C0 1643 aa22.57■■□□□ 1.2
LRFN3-203ENST00000587257 ADGRL3Q9HAR2 1447 aa22.57■■□□□ 1.2
LRFN3-203ENST00000587257 METP08581 1390 aa22.56■■□□□ 1.2
LRFN3-203ENST00000587257 PNPLA6Q8IY17 1366 aa22.56■■□□□ 1.2
LRFN3-203ENST00000587257 RBM6P78332 1123 aaKnown RBP22.56■■□□□ 1.2
LRFN3-203ENST00000587257 ZNF326Q5BKZ1 582 aaKnown RBP22.54■■□□□ 1.2
LRFN3-203ENST00000587257 QTRT2Q9H974 415 aaKnown RBP22.54■■□□□ 1.2
LRFN3-203ENST00000587257 DDX17Q92841 729 aaKnown RBP22.52■■□□□ 1.2
LRFN3-203ENST00000587257 NGLY1Q96IV0 654 aa22.49■■□□□ 1.19
LRFN3-203ENST00000587257 ADAMTS2O95450 1211 aa22.48■■□□□ 1.19
LRFN3-203ENST00000587257 SPHKAPQ2M3C7 1700 aa22.46■■□□□ 1.19
LRFN3-203ENST00000587257 NALCNQ8IZF0 1738 aa22.46■■□□□ 1.19
LRFN3-203ENST00000587257 ITGAEP38570 1179 aa22.46■■□□□ 1.19
LRFN3-203ENST00000587257 ATAD2Q6PL18 1390 aa22.46■■□□□ 1.19
LRFN3-203ENST00000587257 C1orf167Q5SNV9 1468 aa22.46■■□□□ 1.19
LRFN3-203ENST00000587257 NEXMIFQ5QGS0 1516 aa22.44■■□□□ 1.18
LRFN3-203ENST00000587257 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
LRFN3-203ENST00000587257 SOS2Q07890 1332 aaPredicted RBP22.41■■□□□ 1.18
LRFN3-203ENST00000587257 USP21Q9UK80 565 aa22.41■■□□□ 1.18
LRFN3-203ENST00000587257 LAMC1P11047 1609 aa22.4■■□□□ 1.18
LRFN3-203ENST00000587257 TRPC5Q9UL62 973 aaPredicted RBP22.4■■□□□ 1.18
LRFN3-203ENST00000587257 CLTCL1P53675 1640 aa22.39■■□□□ 1.17
LRFN3-203ENST00000587257 ROBO2Q9HCK4 1378 aa22.38■■□□□ 1.17
LRFN3-203ENST00000587257 FOXD1Q16676 465 aa22.38■■□□□ 1.17
LRFN3-203ENST00000587257 ORAI2Q96SN7 254 aa22.38■■□□□ 1.17
LRFN3-203ENST00000587257 SRCAPQ6ZRS2 3230 aa22.36■■□□□ 1.17
LRFN3-203ENST00000587257 FNBP4Q8N3X1 1017 aaPredicted RBP22.36■■□□□ 1.17
LRFN3-203ENST00000587257 PRAG1Q86YV5 1406 aa22.35■■□□□ 1.17
LRFN3-203ENST00000587257 ATRNO75882 1429 aa22.34■■□□□ 1.17
LRFN3-203ENST00000587257 VGFO15240 615 aaPredicted RBP22.34■■□□□ 1.17
LRFN3-203ENST00000587257 ZRANB1Q9UGI0 708 aa22.33■■□□□ 1.17
LRFN3-203ENST00000587257 HFM1A2PYH4 1435 aa22.32■■□□□ 1.16
LRFN3-203ENST00000587257 MYOM2P54296 1465 aa22.3■■□□□ 1.16
LRFN3-203ENST00000587257 COL22A1Q8NFW1 1626 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms