RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
CXXC1-208ENST00000587170 E9PCH4 1651 aa22.21■■□□□ 1.15
CXXC1-208ENST00000587170 COL16A1Q07092 1604 aaPredicted RBP22.2■■□□□ 1.15
CXXC1-208ENST00000587170 STAG3Q9UJ98 1225 aa22.2■■□□□ 1.14
CXXC1-208ENST00000587170 DIP2AQ14689 1571 aa22.19■■□□□ 1.14
CXXC1-208ENST00000587170 SETD1AO15047 1707 aaKnown RBP22.19■■□□□ 1.14
CXXC1-208ENST00000587170 SLC52A1Q9NWF4 448 aa22.18■■□□□ 1.14
CXXC1-208ENST00000587170 PLEKHG1Q9ULL1 1385 aa22.17■■□□□ 1.14
CXXC1-208ENST00000587170 IQGAP3Q86VI3 1631 aa22.17■■□□□ 1.14
CXXC1-208ENST00000587170 SLC26A8Q96RN1 970 aa22.16■■□□□ 1.14
CXXC1-208ENST00000587170 ANKRD50Q9ULJ7 1429 aa22.15■■□□□ 1.14
CXXC1-208ENST00000587170 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.15■■□□□ 1.14
CXXC1-208ENST00000587170 SHPRHQ149N8 1683 aa22.14■■□□□ 1.14
CXXC1-208ENST00000587170 CHIC2Q9UKJ5 165 aa22.14■■□□□ 1.13
CXXC1-208ENST00000587170 MSH6P52701 1360 aa22.13■■□□□ 1.13
CXXC1-208ENST00000587170 APLP2Q06481 763 aa22.13■■□□□ 1.13
CXXC1-208ENST00000587170 PROSER2Q86WR7 435 aaPredicted RBP22.13■■□□□ 1.13
CXXC1-208ENST00000587170 RIMS2Q9UQ26 1411 aa22.12■■□□□ 1.13
CXXC1-208ENST00000587170 NCOA3Q9Y6Q9 1424 aa22.12■■□□□ 1.13
CXXC1-208ENST00000587170 AHDC1Q5TGY3 1603 aaPredicted RBP22.11■■□□□ 1.13
CXXC1-208ENST00000587170 POTEAQ6S8J7 498 aa22.09■■□□□ 1.13
CXXC1-208ENST00000587170 RBM33Q96EV2 1170 aaKnown RBP22.07■■□□□ 1.12
CXXC1-208ENST00000587170 JCADQ9P266 1359 aa22.07■■□□□ 1.12
CXXC1-208ENST00000587170 ADAMTS13Q76LX8 1427 aa22.06■■□□□ 1.12
CXXC1-208ENST00000587170 XRN1Q8IZH2 1706 aaKnown RBP22.06■■□□□ 1.12
CXXC1-208ENST00000587170 NRXN3Q9Y4C0 1643 aa22.06■■□□□ 1.12
CXXC1-208ENST00000587170 SLAIN2Q9P270 581 aa22.05■■□□□ 1.12
CXXC1-208ENST00000587170 SPHKAPQ2M3C7 1700 aa22.05■■□□□ 1.12
CXXC1-208ENST00000587170 TRPM2O94759 1503 aa22.05■■□□□ 1.12
CXXC1-208ENST00000587170 PIK3R4Q99570 1358 aa22.04■■□□□ 1.12
CXXC1-208ENST00000587170 LRP6O75581 1613 aa22.03■■□□□ 1.12
CXXC1-208ENST00000587170 TBX22Q9Y458 520 aa22.02■■□□□ 1.12
CXXC1-208ENST00000587170 NHSL1Q5SYE7 1610 aa22.02■■□□□ 1.11
CXXC1-208ENST00000587170 ROCK1Q13464 1354 aa22■■□□□ 1.11
CXXC1-208ENST00000587170 SETBP1Q9Y6X0 1596 aa21.99■■□□□ 1.11
CXXC1-208ENST00000587170 HDGFP51858 240 aaKnown RBP21.99■■□□□ 1.11
CXXC1-208ENST00000587170 PPP1R15AO75807 674 aaPredicted RBP21.97■■□□□ 1.11
CXXC1-208ENST00000587170 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.97■■□□□ 1.11
CXXC1-208ENST00000587170 BCANQ96GW7 911 aa21.97■■□□□ 1.11
CXXC1-208ENST00000587170 DCCP43146 1447 aa21.97■■□□□ 1.11
CXXC1-208ENST00000587170 FAM50AQ14320 339 aaKnown RBP21.96■■□□□ 1.11
CXXC1-208ENST00000587170 SPATA31A6Q5VVP1 1343 aa21.95■■□□□ 1.1
CXXC1-208ENST00000587170 NALCNQ8IZF0 1738 aa21.93■■□□□ 1.1
CXXC1-208ENST00000587170 PTPRUQ92729 1446 aa21.93■■□□□ 1.1
CXXC1-208ENST00000587170 ASXL1Q8IXJ9 1541 aa21.91■■□□□ 1.1
CXXC1-208ENST00000587170 CADPS2Q86UW7 1296 aa21.91■■□□□ 1.1
CXXC1-208ENST00000587170 C19orf44Q9H6X5 657 aa21.9■■□□□ 1.1
CXXC1-208ENST00000587170 LAMC1P11047 1609 aa21.9■■□□□ 1.1
CXXC1-208ENST00000587170 KIF1BO60333 1816 aa21.9■■□□□ 1.1
CXXC1-208ENST00000587170 CDK12Q9NYV4 1490 aaPredicted RBP21.87■■□□□ 1.09
CXXC1-208ENST00000587170 CLTCL1P53675 1640 aa21.87■■□□□ 1.09
CXXC1-208ENST00000587170 NEXMIFQ5QGS0 1516 aa21.85■■□□□ 1.09
CXXC1-208ENST00000587170 MST1RQ04912 1400 aa21.85■■□□□ 1.09
CXXC1-208ENST00000587170 SETD5Q9C0A6 1442 aa21.85■■□□□ 1.09
CXXC1-208ENST00000587170 ATF3P18847 181 aa21.84■■□□□ 1.09
CXXC1-208ENST00000587170 C14orf37Q86TY3 774 aa21.84■■□□□ 1.09
CXXC1-208ENST00000587170 NUP155O75694 1391 aa21.84■■□□□ 1.09
CXXC1-208ENST00000587170 CHGAP10645 457 aaKnown RBP21.83■■□□□ 1.09
CXXC1-208ENST00000587170 ZNF772Q68DY9 489 aaPredicted RBP21.83■■□□□ 1.09
CXXC1-208ENST00000587170 BRINP3Q76B58 766 aa21.83■■□□□ 1.09
CXXC1-208ENST00000587170 NUTM2DQ5VT03 806 aaPredicted RBP21.82■■□□□ 1.08
CXXC1-208ENST00000587170 AMOTL2Q9Y2J4 779 aa21.81■■□□□ 1.08
CXXC1-208ENST00000587170 ADGRL3Q9HAR2 1447 aa21.8■■□□□ 1.08
CXXC1-208ENST00000587170 MEX3CQ5U5Q3 659 aaKnown RBP21.77■■□□□ 1.08
CXXC1-208ENST00000587170 METP08581 1390 aa21.76■■□□□ 1.07
CXXC1-208ENST00000587170 PRAG1Q86YV5 1406 aa21.76■■□□□ 1.07
CXXC1-208ENST00000587170 PPLO60437 1756 aa21.75■■□□□ 1.07
CXXC1-208ENST00000587170 UPF1Q92900 1129 aaKnown RBP eCLIP21.75■■□□□ 1.07
CXXC1-208ENST00000587170 COL22A1Q8NFW1 1626 aaPredicted RBP21.73■■□□□ 1.07
CXXC1-208ENST00000587170 EP400Q96L91 3159 aa21.73■■□□□ 1.07
CXXC1-208ENST00000587170 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
CXXC1-208ENST00000587170 MARF1Q9Y4F3 1742 aaKnown RBP21.72■■□□□ 1.07
CXXC1-208ENST00000587170 PNPLA6Q8IY17 1366 aa21.71■■□□□ 1.07
CXXC1-208ENST00000587170 SRCAPQ6ZRS2 3230 aa21.7■■□□□ 1.07
CXXC1-208ENST00000587170 TRIM52Q96A61 297 aa21.7■■□□□ 1.06
CXXC1-208ENST00000587170 RXRBP28702 533 aa21.69■■□□□ 1.06
CXXC1-208ENST00000587170 AFF2P51816 1311 aa21.69■■□□□ 1.06
CXXC1-208ENST00000587170 RGS12O14924 1447 aa21.69■■□□□ 1.06
CXXC1-208ENST00000587170 C1orf167Q5SNV9 1468 aa21.66■■□□□ 1.06
CXXC1-208ENST00000587170 LRRC59Q96AG4 307 aaKnown RBP21.66■■□□□ 1.06
CXXC1-208ENST00000587170 IFT172Q9UG01 1749 aa21.64■■□□□ 1.06
CXXC1-208ENST00000587170 NUTM2BA6NNL0 878 aaPredicted RBP21.64■■□□□ 1.05
CXXC1-208ENST00000587170 NUTM2EB1AL46 878 aaPredicted RBP21.64■■□□□ 1.05
CXXC1-208ENST00000587170 NUTM2AQ8IVF1 878 aaPredicted RBP21.64■■□□□ 1.05
CXXC1-208ENST00000587170 CDC42BPGQ6DT37 1551 aa21.64■■□□□ 1.05
CXXC1-208ENST00000587170 ZNF326Q5BKZ1 582 aaKnown RBP21.63■■□□□ 1.05
CXXC1-208ENST00000587170 NAIPQ13075 1403 aa21.63■■□□□ 1.05
CXXC1-208ENST00000587170 RRBP1Q9P2E9 1410 aaKnown RBP21.62■■□□□ 1.05
CXXC1-208ENST00000587170 KNDC1Q76NI1 1749 aa21.6■■□□□ 1.05
CXXC1-208ENST00000587170 ITGAEP38570 1179 aa21.6■■□□□ 1.05
CXXC1-208ENST00000587170 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.6■■□□□ 1.05
CXXC1-208ENST00000587170 ROBO2Q9HCK4 1378 aa21.6■■□□□ 1.05
CXXC1-208ENST00000587170 DDX17Q92841 729 aaKnown RBP21.58■■□□□ 1.05
CXXC1-208ENST00000587170 SOS2Q07890 1332 aaPredicted RBP21.57■■□□□ 1.04
CXXC1-208ENST00000587170 HFM1A2PYH4 1435 aa21.57■■□□□ 1.04
CXXC1-208ENST00000587170 RBM6P78332 1123 aaKnown RBP21.57■■□□□ 1.04
CXXC1-208ENST00000587170 C8orf37Q96NL8 207 aa21.56■■□□□ 1.04
CXXC1-208ENST00000587170 MYOM2P54296 1465 aa21.55■■□□□ 1.04
CXXC1-208ENST00000587170 QTRT2Q9H974 415 aaKnown RBP21.54■■□□□ 1.04
CXXC1-208ENST00000587170 PXDNQ92626 1479 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms