RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 C8orf34Q49A92 452 aa22■■□□□ 1.11
CIRBP-212ENST00000587169 NUTM2DQ5VT03 806 aaPredicted RBP22■■□□□ 1.11
CIRBP-212ENST00000587169 DDRGK1Q96HY6 314 aa22■■□□□ 1.11
CIRBP-212ENST00000587169 IQGAP3Q86VI3 1631 aa22■■□□□ 1.11
CIRBP-212ENST00000587169 USP35Q9P2H5 1018 aa21.98■■□□□ 1.11
CIRBP-212ENST00000587169 LAMC1P11047 1609 aa21.98■■□□□ 1.11
CIRBP-212ENST00000587169 EIF2AK4Q9P2K8 1649 aaKnown RBP21.98■■□□□ 1.11
CIRBP-212ENST00000587169 TRAPPC8Q9Y2L5 1435 aa21.97■■□□□ 1.11
CIRBP-212ENST00000587169 NFKBIBQ15653 356 aa21.97■■□□□ 1.11
CIRBP-212ENST00000587169 FAM161AQ3B820 660 aa21.96■■□□□ 1.11
CIRBP-212ENST00000587169 DAXXQ9UER7 740 aaPredicted RBP21.96■■□□□ 1.11
CIRBP-212ENST00000587169 DUOX2Q9NRD8 1548 aa21.96■■□□□ 1.11
CIRBP-212ENST00000587169 MAST1Q9Y2H9 1570 aa21.96■■□□□ 1.11
CIRBP-212ENST00000587169 EFCAB2Q5VUJ9 269 aa21.96■■□□□ 1.11
CIRBP-212ENST00000587169 ATP10AO60312 1499 aa21.95■■□□□ 1.1
CIRBP-212ENST00000587169 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.94■■□□□ 1.1
CIRBP-212ENST00000587169 KIF3BO15066 747 aa21.93■■□□□ 1.1
CIRBP-212ENST00000587169 CFAP70Q5T0N1 1121 aa21.93■■□□□ 1.1
CIRBP-212ENST00000587169 CDCA8Q53HL2 280 aa21.92■■□□□ 1.1
CIRBP-212ENST00000587169 SPAG9O60271 1321 aaKnown RBP21.91■■□□□ 1.1
CIRBP-212ENST00000587169 IGHDP01880 384 aa21.91■■□□□ 1.1
CIRBP-212ENST00000587169 CARD14Q9BXL6 1004 aa21.91■■□□□ 1.1
CIRBP-212ENST00000587169 PLXNC1O60486 1568 aa21.91■■□□□ 1.1
CIRBP-212ENST00000587169 ANO8Q9HCE9 1232 aaPredicted RBP21.9■■□□□ 1.1
CIRBP-212ENST00000587169 TNNT2P45379 298 aaPredicted RBP21.9■■□□□ 1.1
CIRBP-212ENST00000587169 NEUROD2Q15784 382 aa21.9■■□□□ 1.1
CIRBP-212ENST00000587169 TRMT2AQ8IZ69 625 aaKnown RBP21.9■■□□□ 1.1
CIRBP-212ENST00000587169 ASXL1Q8IXJ9 1541 aa21.89■■□□□ 1.1
CIRBP-212ENST00000587169 SCAF11Q99590 1463 aaKnown RBP21.89■■□□□ 1.1
CIRBP-212ENST00000587169 BRPF3Q9ULD4 1205 aa21.89■■□□□ 1.1
CIRBP-212ENST00000587169 RNF17Q9BXT8 1623 aaKnown RBP21.89■■□□□ 1.09
CIRBP-212ENST00000587169 MADDQ8WXG6 1647 aa21.88■■□□□ 1.09
CIRBP-212ENST00000587169 PLCH2O75038 1416 aa21.87■■□□□ 1.09
CIRBP-212ENST00000587169 PANK1Q8TE04 598 aa21.87■■□□□ 1.09
CIRBP-212ENST00000587169 RRP7AQ9Y3A4 280 aaKnown RBP21.86■■□□□ 1.09
CIRBP-212ENST00000587169 GSE1Q14687 1217 aa21.86■■□□□ 1.09
CIRBP-212ENST00000587169 FRAT1Q92837 279 aaPredicted RBP21.85■■□□□ 1.09
CIRBP-212ENST00000587169 COG6Q9Y2V7 657 aa21.85■■□□□ 1.09
CIRBP-212ENST00000587169 ADGRF5Q8IZF2 1346 aa21.85■■□□□ 1.09
CIRBP-212ENST00000587169 PIK3C2GO75747 1445 aa21.85■■□□□ 1.09
CIRBP-212ENST00000587169 GGT6Q6P531 493 aa21.85■■□□□ 1.09
CIRBP-212ENST00000587169 FRAT2O75474 233 aaPredicted RBP21.85■■□□□ 1.09
CIRBP-212ENST00000587169 NKTRP30414 1462 aaKnown RBP21.83■■□□□ 1.08
CIRBP-212ENST00000587169 IQGAP1P46940 1657 aa21.83■■□□□ 1.08
CIRBP-212ENST00000587169 E9PSI1 815 aa21.82■■□□□ 1.08
CIRBP-212ENST00000587169 SEC24BO95487 1268 aa21.82■■□□□ 1.08
CIRBP-212ENST00000587169 CANXP27824 592 aaKnown RBP21.82■■□□□ 1.08
CIRBP-212ENST00000587169 ABCC2Q92887 1545 aa21.82■■□□□ 1.08
CIRBP-212ENST00000587169 SYNMO15061 1565 aa21.81■■□□□ 1.08
CIRBP-212ENST00000587169 SCAPERQ9BY12 1400 aa21.81■■□□□ 1.08
CIRBP-212ENST00000587169 TNNQ9UQP3 1299 aa21.8■■□□□ 1.08
CIRBP-212ENST00000587169 CLTCL1P53675 1640 aa21.79■■□□□ 1.08
CIRBP-212ENST00000587169 BCL2L13Q9BXK5 485 aa21.79■■□□□ 1.08
CIRBP-212ENST00000587169 WWC1Q8IX03 1113 aa21.78■■□□□ 1.08
CIRBP-212ENST00000587169 UGGT1Q9NYU2 1555 aa21.78■■□□□ 1.08
CIRBP-212ENST00000587169 CENPJQ9HC77 1338 aaPredicted RBP21.77■■□□□ 1.08
CIRBP-212ENST00000587169 EIF3AQ14152 1382 aaKnown RBP21.77■■□□□ 1.08
CIRBP-212ENST00000587169 TRPM2O94759 1503 aa21.77■■□□□ 1.08
CIRBP-212ENST00000587169 SAFB2Q14151 953 aaKnown RBP eCLIP21.77■■□□□ 1.07
CIRBP-212ENST00000587169 ABCC1P33527 1531 aa21.76■■□□□ 1.07
CIRBP-212ENST00000587169 PTPRTO14522 1441 aa21.76■■□□□ 1.07
CIRBP-212ENST00000587169 MYOM1P52179 1685 aa21.76■■□□□ 1.07
CIRBP-212ENST00000587169 USP19O94966 1318 aa21.76■■□□□ 1.07
CIRBP-212ENST00000587169 NPC1L1Q9UHC9 1359 aa21.75■■□□□ 1.07
CIRBP-212ENST00000587169 CFAP65Q6ZU64 1925 aaKnown RBP21.75■■□□□ 1.07
CIRBP-212ENST00000587169 ERVK-7P63135 1459 aa21.75■■□□□ 1.07
CIRBP-212ENST00000587169 RAPGEF3O95398 923 aa21.74■■□□□ 1.07
CIRBP-212ENST00000587169 CLUAP1Q96AJ1 413 aa21.74■■□□□ 1.07
CIRBP-212ENST00000587169 SLC12A5Q9H2X9 1139 aa21.74■■□□□ 1.07
CIRBP-212ENST00000587169 TRAK1Q9UPV9 953 aa21.74■■□□□ 1.07
CIRBP-212ENST00000587169 CLASP1Q7Z460 1538 aa21.73■■□□□ 1.07
CIRBP-212ENST00000587169 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.73■■□□□ 1.07
CIRBP-212ENST00000587169 SPHKAPQ2M3C7 1700 aa21.73■■□□□ 1.07
CIRBP-212ENST00000587169 MORC1Q86VD1 984 aa21.72■■□□□ 1.07
CIRBP-212ENST00000587169 RLBP1P12271 317 aa21.72■■□□□ 1.07
CIRBP-212ENST00000587169 TMEM132EQ6IEE7 984 aa21.71■■□□□ 1.07
CIRBP-212ENST00000587169 CGNL1Q0VF96 1302 aa21.7■■□□□ 1.06
CIRBP-212ENST00000587169 PDE3AQ14432 1141 aa21.7■■□□□ 1.06
CIRBP-212ENST00000587169 KANK1Q14678 1352 aa21.7■■□□□ 1.06
CIRBP-212ENST00000587169 STAC3Q96MF2 364 aa21.7■■□□□ 1.06
CIRBP-212ENST00000587169 SLKQ9H2G2 1235 aaPredicted RBP21.7■■□□□ 1.06
CIRBP-212ENST00000587169 TCP11L2Q8N4U5 519 aa21.69■■□□□ 1.06
CIRBP-212ENST00000587169 PCDHB15Q9Y5E8 787 aa21.69■■□□□ 1.06
CIRBP-212ENST00000587169 ZCCHC11Q5TAX3 1644 aaKnown RBP21.69■■□□□ 1.06
CIRBP-212ENST00000587169 ZFYVE16Q7Z3T8 1539 aa21.68■■□□□ 1.06
CIRBP-212ENST00000587169 RARSP54136 660 aaKnown RBP21.67■■□□□ 1.06
CIRBP-212ENST00000587169 CEP152O94986 1710 aa21.67■■□□□ 1.06
CIRBP-212ENST00000587169 KDM5AP29375 1690 aaKnown RBP21.67■■□□□ 1.06
CIRBP-212ENST00000587169 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
CIRBP-212ENST00000587169 NSD3Q9BZ95 1437 aa21.66■■□□□ 1.06
CIRBP-212ENST00000587169 MTHFSP49914 203 aa21.65■■□□□ 1.06
CIRBP-212ENST00000587169 NPM1P06748 294 aaKnown RBP eCLIP21.64■■□□□ 1.06
CIRBP-212ENST00000587169 RTEL1-TNFRSF6BF6WH68 1400 aa21.64■■□□□ 1.05
CIRBP-212ENST00000587169 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.05
CIRBP-212ENST00000587169 RUNDC1Q96C34 613 aa21.63■■□□□ 1.05
CIRBP-212ENST00000587169 POLR3AO14802 1390 aaPredicted RBP21.63■■□□□ 1.05
CIRBP-212ENST00000587169 POGKQ9P215 609 aa21.62■■□□□ 1.05
CIRBP-212ENST00000587169 ABCA6Q8N139 1617 aa21.61■■□□□ 1.05
CIRBP-212ENST00000587169 PDZRN3Q9UPQ7 1066 aa21.61■■□□□ 1.05
CIRBP-212ENST00000587169 NOS1P29475 1434 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms