RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 RIMS2Q9UQ26 1411 aa28.73■■■□□ 2.19
CLPTM1-206ENST00000586975 NUTM2DQ5VT03 806 aaPredicted RBP28.72■■■□□ 2.19
CLPTM1-206ENST00000586975 TRIM52Q96A61 297 aa28.72■■■□□ 2.19
CLPTM1-206ENST00000586975 TMEM131LA2VDJ0 1609 aa28.69■■■□□ 2.18
CLPTM1-206ENST00000586975 ZFYVE9O95405 1425 aa28.69■■■□□ 2.18
CLPTM1-206ENST00000586975 DISP3Q9P2K9 1392 aa28.68■■■□□ 2.18
CLPTM1-206ENST00000586975 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.68■■■□□ 2.18
CLPTM1-206ENST00000586975 MYO5BQ9ULV0 1848 aa28.67■■■□□ 2.18
CLPTM1-206ENST00000586975 KCNA6P17658 529 aa28.67■■■□□ 2.18
CLPTM1-206ENST00000586975 HSPA1LP34931 641 aa28.66■■■□□ 2.18
CLPTM1-206ENST00000586975 PLEKHG1Q9ULL1 1385 aa28.65■■■□□ 2.18
CLPTM1-206ENST00000586975 PROSER2Q86WR7 435 aaPredicted RBP28.64■■■□□ 2.18
CLPTM1-206ENST00000586975 RBM33Q96EV2 1170 aaKnown RBP28.64■■■□□ 2.18
CLPTM1-206ENST00000586975 HFM1A2PYH4 1435 aa28.63■■■□□ 2.17
CLPTM1-206ENST00000586975 ZNF326Q5BKZ1 582 aaKnown RBP28.62■■■□□ 2.17
CLPTM1-206ENST00000586975 TMEM94Q12767 1356 aa28.6■■■□□ 2.17
CLPTM1-206ENST00000586975 SLC4A1APQ9BWU0 796 aaKnown RBP28.58■■■□□ 2.17
CLPTM1-206ENST00000586975 ALKQ9UM73 1620 aa28.58■■■□□ 2.17
CLPTM1-206ENST00000586975 SPHKAPQ2M3C7 1700 aa28.57■■■□□ 2.16
CLPTM1-206ENST00000586975 TBX22Q9Y458 520 aa28.56■■■□□ 2.16
CLPTM1-206ENST00000586975 NKTRP30414 1462 aaKnown RBP28.5■■■□□ 2.15
CLPTM1-206ENST00000586975 ADAMTS13Q76LX8 1427 aa28.5■■■□□ 2.15
CLPTM1-206ENST00000586975 XIRP1Q702N8 1843 aaKnown RBP28.5■■■□□ 2.15
CLPTM1-206ENST00000586975 NWD1Q149M9 1564 aa28.49■■■□□ 2.15
CLPTM1-206ENST00000586975 TRPM2O94759 1503 aa28.48■■■□□ 2.15
CLPTM1-206ENST00000586975 CLTCL1P53675 1640 aa28.47■■■□□ 2.15
CLPTM1-206ENST00000586975 FOXD1Q16676 465 aa28.46■■■□□ 2.15
CLPTM1-206ENST00000586975 C14orf37Q86TY3 774 aa28.46■■■□□ 2.15
CLPTM1-206ENST00000586975 MSH6P52701 1360 aa28.45■■■□□ 2.14
CLPTM1-206ENST00000586975 ILDR2Q71H61 639 aa28.43■■■□□ 2.14
CLPTM1-206ENST00000586975 DIP2AQ14689 1571 aa28.41■■■□□ 2.14
CLPTM1-206ENST00000586975 CHD2O14647 1828 aaKnown RBP28.41■■■□□ 2.14
CLPTM1-206ENST00000586975 AMOTL2Q9Y2J4 779 aa28.41■■■□□ 2.14
CLPTM1-206ENST00000586975 PIK3R4Q99570 1358 aa28.4■■■□□ 2.14
CLPTM1-206ENST00000586975 MPHOSPH9Q99550 1183 aa28.37■■■□□ 2.13
CLPTM1-206ENST00000586975 FAM135BQ49AJ0 1406 aa28.36■■■□□ 2.13
CLPTM1-206ENST00000586975 PTPRUQ92729 1446 aa28.35■■■□□ 2.13
CLPTM1-206ENST00000586975 KIF1BO60333 1816 aa28.35■■■□□ 2.13
CLPTM1-206ENST00000586975 NEXMIFQ5QGS0 1516 aa28.34■■■□□ 2.13
CLPTM1-206ENST00000586975 SLAIN2Q9P270 581 aa28.34■■■□□ 2.13
CLPTM1-206ENST00000586975 SETBP1Q9Y6X0 1596 aa28.33■■■□□ 2.12
CLPTM1-206ENST00000586975 VGFO15240 615 aaPredicted RBP28.32■■■□□ 2.12
CLPTM1-206ENST00000586975 METP08581 1390 aa28.32■■■□□ 2.12
CLPTM1-206ENST00000586975 SETD5Q9C0A6 1442 aa28.32■■■□□ 2.12
CLPTM1-206ENST00000586975 NRXN3Q9Y4C0 1643 aa28.31■■■□□ 2.12
CLPTM1-206ENST00000586975 MED1Q15648 1581 aaPredicted RBP28.3■■■□□ 2.12
CLPTM1-206ENST00000586975 ATF3P18847 181 aa28.3■■■□□ 2.12
CLPTM1-206ENST00000586975 NCOA3Q9Y6Q9 1424 aa28.29■■■□□ 2.12
CLPTM1-206ENST00000586975 C19orf44Q9H6X5 657 aa28.29■■■□□ 2.12
CLPTM1-206ENST00000586975 RPGRIP1LQ68CZ1 1315 aa28.28■■■□□ 2.12
CLPTM1-206ENST00000586975 RGL3Q3MIN7 710 aa28.28■■■□□ 2.12
CLPTM1-206ENST00000586975 PHF23Q9BUL5 403 aaPredicted RBP28.28■■■□□ 2.12
CLPTM1-206ENST00000586975 ROBO1Q9Y6N7 1651 aa28.28■■■□□ 2.12
CLPTM1-206ENST00000586975 CCDC144AA2RUR9 1427 aa28.27■■■□□ 2.12
CLPTM1-206ENST00000586975 CADPS2Q86UW7 1296 aa28.26■■■□□ 2.11
CLPTM1-206ENST00000586975 ACIN1Q9UKV3 1341 aaKnown RBP28.23■■■□□ 2.11
CLPTM1-206ENST00000586975 RAB3GAP2Q9H2M9 1393 aa28.23■■■□□ 2.11
CLPTM1-206ENST00000586975 XRN1Q8IZH2 1706 aaKnown RBP28.19■■■□□ 2.1
CLPTM1-206ENST00000586975 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.19■■■□□ 2.1
CLPTM1-206ENST00000586975 SOCS7O14512 581 aa28.15■■■□□ 2.1
CLPTM1-206ENST00000586975 ADGRF5Q8IZF2 1346 aa28.15■■■□□ 2.1
CLPTM1-206ENST00000586975 SPATA31E1Q6ZUB1 1445 aa28.13■■■□□ 2.09
CLPTM1-206ENST00000586975 PPLO60437 1756 aa28.12■■■□□ 2.09
CLPTM1-206ENST00000586975 PHLPP1O60346 1717 aa28.1■■■□□ 2.09
CLPTM1-206ENST00000586975 DCCP43146 1447 aa28.09■■■□□ 2.09
CLPTM1-206ENST00000586975 BRINP3Q76B58 766 aa28.09■■■□□ 2.09
CLPTM1-206ENST00000586975 ANKRD30BQ9BXX2 1392 aa28.09■■■□□ 2.09
CLPTM1-206ENST00000586975 ADGRL3Q9HAR2 1447 aa28.09■■■□□ 2.09
CLPTM1-206ENST00000586975 ROBO2Q9HCK4 1378 aa28.08■■■□□ 2.09
CLPTM1-206ENST00000586975 STK26Q9P289 416 aa28.06■■■□□ 2.08
CLPTM1-206ENST00000586975 JCADQ9P266 1359 aa28.06■■■□□ 2.08
CLPTM1-206ENST00000586975 SETD1AO15047 1707 aaKnown RBP28.05■■■□□ 2.08
CLPTM1-206ENST00000586975 MST1RQ04912 1400 aa28.04■■■□□ 2.08
CLPTM1-206ENST00000586975 PTCH1Q13635 1447 aa28.04■■■□□ 2.08
CLPTM1-206ENST00000586975 TMEM132EQ6IEE7 984 aa28.02■■■□□ 2.08
CLPTM1-206ENST00000586975 COL16A1Q07092 1604 aaPredicted RBP28■■■□□ 2.07
CLPTM1-206ENST00000586975 RGS17Q9UGC6 210 aaPredicted RBP28■■■□□ 2.07
CLPTM1-206ENST00000586975 NALCNQ8IZF0 1738 aa28■■■□□ 2.07
CLPTM1-206ENST00000586975 ASXL1Q8IXJ9 1541 aa27.98■■■□□ 2.07
CLPTM1-206ENST00000586975 AHDC1Q5TGY3 1603 aaPredicted RBP27.98■■■□□ 2.07
CLPTM1-206ENST00000586975 DDX17Q92841 729 aaKnown RBP27.97■■■□□ 2.07
CLPTM1-206ENST00000586975 IFT172Q9UG01 1749 aa27.96■■■□□ 2.07
CLPTM1-206ENST00000586975 PIK3C2GO75747 1445 aa27.96■■■□□ 2.07
CLPTM1-206ENST00000586975 HRCP23327 699 aa27.96■■■□□ 2.07
CLPTM1-206ENST00000586975 WAPLQ7Z5K2 1190 aa27.95■■■□□ 2.06
CLPTM1-206ENST00000586975 PRAG1Q86YV5 1406 aa27.93■■■□□ 2.06
CLPTM1-206ENST00000586975 MEX3CQ5U5Q3 659 aaKnown RBP27.93■■■□□ 2.06
CLPTM1-206ENST00000586975 LRPPRCP42704 1394 aaKnown RBP27.93■■■□□ 2.06
CLPTM1-206ENST00000586975 C1orf167Q5SNV9 1468 aa27.93■■■□□ 2.06
CLPTM1-206ENST00000586975 CFAP70Q5T0N1 1121 aa27.92■■■□□ 2.06
CLPTM1-206ENST00000586975 SPATA31A6Q5VVP1 1343 aa27.92■■■□□ 2.06
CLPTM1-206ENST00000586975 NUTM2BA6NNL0 878 aaPredicted RBP27.91■■■□□ 2.06
CLPTM1-206ENST00000586975 NUTM2EB1AL46 878 aaPredicted RBP27.91■■■□□ 2.06
CLPTM1-206ENST00000586975 NUTM2AQ8IVF1 878 aaPredicted RBP27.91■■■□□ 2.06
CLPTM1-206ENST00000586975 ORAI2Q96SN7 254 aa27.91■■■□□ 2.06
CLPTM1-206ENST00000586975 C14orf93Q9H972 538 aaKnown RBP27.91■■■□□ 2.06
CLPTM1-206ENST00000586975 KDM2AQ9Y2K7 1162 aa27.9■■■□□ 2.06
CLPTM1-206ENST00000586975 ABCC11Q96J66 1382 aa27.88■■■□□ 2.05
CLPTM1-206ENST00000586975 POTEAQ6S8J7 498 aa27.88■■■□□ 2.05
CLPTM1-206ENST00000586975 LRRC59Q96AG4 307 aaKnown RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms