RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 ZFYVE9O95405 1425 aa23.5■■□□□ 1.35
MBD1-215ENST00000586884 PROSER2Q86WR7 435 aaPredicted RBP23.5■■□□□ 1.35
MBD1-215ENST00000586884 ROCK1Q13464 1354 aa23.5■■□□□ 1.35
MBD1-215ENST00000586884 HDGFP51858 240 aaKnown RBP23.49■■□□□ 1.35
MBD1-215ENST00000586884 BCANQ96GW7 911 aa23.49■■□□□ 1.35
MBD1-215ENST00000586884 PLEKHG1Q9ULL1 1385 aa23.48■■□□□ 1.35
MBD1-215ENST00000586884 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
MBD1-215ENST00000586884 RIMS2Q9UQ26 1411 aa23.47■■□□□ 1.35
MBD1-215ENST00000586884 TMEM131LA2VDJ0 1609 aa23.45■■□□□ 1.34
MBD1-215ENST00000586884 PPP1R15AO75807 674 aaPredicted RBP23.45■■□□□ 1.34
MBD1-215ENST00000586884 MSH6P52701 1360 aa23.43■■□□□ 1.34
MBD1-215ENST00000586884 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.42■■□□□ 1.34
MBD1-215ENST00000586884 RBM33Q96EV2 1170 aaKnown RBP23.42■■□□□ 1.34
MBD1-215ENST00000586884 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
MBD1-215ENST00000586884 ROBO1Q9Y6N7 1651 aa23.41■■□□□ 1.34
MBD1-215ENST00000586884 E9PCH4 1651 aa23.4■■□□□ 1.34
MBD1-215ENST00000586884 MYO5BQ9ULV0 1848 aa23.39■■□□□ 1.33
MBD1-215ENST00000586884 TBX22Q9Y458 520 aa23.39■■□□□ 1.33
MBD1-215ENST00000586884 CHGAP10645 457 aaKnown RBP23.38■■□□□ 1.33
MBD1-215ENST00000586884 NUP155O75694 1391 aa23.37■■□□□ 1.33
MBD1-215ENST00000586884 NCOA3Q9Y6Q9 1424 aa23.36■■□□□ 1.33
MBD1-215ENST00000586884 CHD2O14647 1828 aaKnown RBP23.36■■□□□ 1.33
MBD1-215ENST00000586884 SLAIN2Q9P270 581 aa23.35■■□□□ 1.33
MBD1-215ENST00000586884 RGS17Q9UGC6 210 aaPredicted RBP23.35■■□□□ 1.33
MBD1-215ENST00000586884 DIP2AQ14689 1571 aa23.35■■□□□ 1.33
MBD1-215ENST00000586884 ADAMTS13Q76LX8 1427 aa23.33■■□□□ 1.33
MBD1-215ENST00000586884 PIK3R4Q99570 1358 aa23.33■■□□□ 1.33
MBD1-215ENST00000586884 ITGAEP38570 1179 aa23.31■■□□□ 1.32
MBD1-215ENST00000586884 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
MBD1-215ENST00000586884 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
MBD1-215ENST00000586884 TRPM2O94759 1503 aa23.27■■□□□ 1.32
MBD1-215ENST00000586884 JCADQ9P266 1359 aa23.27■■□□□ 1.31
MBD1-215ENST00000586884 PHLPP1O60346 1717 aa23.25■■□□□ 1.31
MBD1-215ENST00000586884 CADPS2Q86UW7 1296 aa23.25■■□□□ 1.31
MBD1-215ENST00000586884 C19orf44Q9H6X5 657 aa23.24■■□□□ 1.31
MBD1-215ENST00000586884 ATF3P18847 181 aa23.22■■□□□ 1.31
MBD1-215ENST00000586884 PPARGC1BQ86YN6 1023 aaKnown RBP23.22■■□□□ 1.31
MBD1-215ENST00000586884 POTEAQ6S8J7 498 aa23.21■■□□□ 1.31
MBD1-215ENST00000586884 AMOTL2Q9Y2J4 779 aa23.21■■□□□ 1.31
MBD1-215ENST00000586884 COL16A1Q07092 1604 aaPredicted RBP23.21■■□□□ 1.31
MBD1-215ENST00000586884 SPHKAPQ2M3C7 1700 aa23.2■■□□□ 1.3
MBD1-215ENST00000586884 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.19■■□□□ 1.3
MBD1-215ENST00000586884 SETBP1Q9Y6X0 1596 aa23.19■■□□□ 1.3
MBD1-215ENST00000586884 PTPRUQ92729 1446 aa23.19■■□□□ 1.3
MBD1-215ENST00000586884 AHDC1Q5TGY3 1603 aaPredicted RBP23.17■■□□□ 1.3
MBD1-215ENST00000586884 NRXN3Q9Y4C0 1643 aa23.17■■□□□ 1.3
MBD1-215ENST00000586884 DCCP43146 1447 aa23.16■■□□□ 1.3
MBD1-215ENST00000586884 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
MBD1-215ENST00000586884 SPATA31A6Q5VVP1 1343 aa23.16■■□□□ 1.3
MBD1-215ENST00000586884 ZNF326Q5BKZ1 582 aaKnown RBP23.16■■□□□ 1.3
MBD1-215ENST00000586884 XRN1Q8IZH2 1706 aaKnown RBP23.14■■□□□ 1.3
MBD1-215ENST00000586884 NAIPQ13075 1403 aa23.12■■□□□ 1.29
MBD1-215ENST00000586884 BRINP3Q76B58 766 aa23.11■■□□□ 1.29
MBD1-215ENST00000586884 CLTCL1P53675 1640 aa23.1■■□□□ 1.29
MBD1-215ENST00000586884 METP08581 1390 aa23.1■■□□□ 1.29
MBD1-215ENST00000586884 NEXMIFQ5QGS0 1516 aa23.09■■□□□ 1.29
MBD1-215ENST00000586884 LRP6O75581 1613 aa23.09■■□□□ 1.29
MBD1-215ENST00000586884 SHPRHQ149N8 1683 aa23.08■■□□□ 1.29
MBD1-215ENST00000586884 MEX3CQ5U5Q3 659 aaKnown RBP23.07■■□□□ 1.28
MBD1-215ENST00000586884 ASXL1Q8IXJ9 1541 aa23.07■■□□□ 1.28
MBD1-215ENST00000586884 MST1RQ04912 1400 aa23.06■■□□□ 1.28
MBD1-215ENST00000586884 ADGRL3Q9HAR2 1447 aa23.05■■□□□ 1.28
MBD1-215ENST00000586884 ZNF772Q68DY9 489 aaPredicted RBP23.04■■□□□ 1.28
MBD1-215ENST00000586884 HFM1A2PYH4 1435 aa23.04■■□□□ 1.28
MBD1-215ENST00000586884 SETD5Q9C0A6 1442 aa23.02■■□□□ 1.28
MBD1-215ENST00000586884 KIF1BO60333 1816 aa23.01■■□□□ 1.27
MBD1-215ENST00000586884 VGFO15240 615 aaPredicted RBP23■■□□□ 1.27
MBD1-215ENST00000586884 TRIM52Q96A61 297 aa23■■□□□ 1.27
MBD1-215ENST00000586884 NHSL1Q5SYE7 1610 aa22.99■■□□□ 1.27
MBD1-215ENST00000586884 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
MBD1-215ENST00000586884 RPGRIP1LQ68CZ1 1315 aa22.98■■□□□ 1.27
MBD1-215ENST00000586884 LRRC59Q96AG4 307 aaKnown RBP22.97■■□□□ 1.27
MBD1-215ENST00000586884 SETD1AO15047 1707 aaKnown RBP22.96■■□□□ 1.27
MBD1-215ENST00000586884 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
MBD1-215ENST00000586884 SLC4A1APQ9BWU0 796 aaKnown RBP22.96■■□□□ 1.27
MBD1-215ENST00000586884 NUTM2BA6NNL0 878 aaPredicted RBP22.95■■□□□ 1.26
MBD1-215ENST00000586884 NUTM2EB1AL46 878 aaPredicted RBP22.95■■□□□ 1.26
MBD1-215ENST00000586884 PRAG1Q86YV5 1406 aa22.95■■□□□ 1.26
MBD1-215ENST00000586884 NUTM2AQ8IVF1 878 aaPredicted RBP22.95■■□□□ 1.26
MBD1-215ENST00000586884 C1orf167Q5SNV9 1468 aa22.92■■□□□ 1.26
MBD1-215ENST00000586884 ROBO2Q9HCK4 1378 aa22.91■■□□□ 1.26
MBD1-215ENST00000586884 PNPLA6Q8IY17 1366 aa22.9■■□□□ 1.26
MBD1-215ENST00000586884 RXRBP28702 533 aa22.9■■□□□ 1.26
MBD1-215ENST00000586884 DDX17Q92841 729 aaKnown RBP22.89■■□□□ 1.25
MBD1-215ENST00000586884 AFF2P51816 1311 aa22.88■■□□□ 1.25
MBD1-215ENST00000586884 CDK12Q9NYV4 1490 aaPredicted RBP22.88■■□□□ 1.25
MBD1-215ENST00000586884 PPLO60437 1756 aa22.86■■□□□ 1.25
MBD1-215ENST00000586884 LAMC1P11047 1609 aa22.86■■□□□ 1.25
MBD1-215ENST00000586884 SOS2Q07890 1332 aaPredicted RBP22.83■■□□□ 1.25
MBD1-215ENST00000586884 CCDC144AA2RUR9 1427 aa22.83■■□□□ 1.25
MBD1-215ENST00000586884 UPF1Q92900 1129 aaKnown RBP eCLIP22.83■■□□□ 1.25
MBD1-215ENST00000586884 C8orf37Q96NL8 207 aa22.83■■□□□ 1.25
MBD1-215ENST00000586884 ORAI2Q96SN7 254 aa22.82■■□□□ 1.24
MBD1-215ENST00000586884 FOXD1Q16676 465 aa22.81■■□□□ 1.24
MBD1-215ENST00000586884 SPATA31E1Q6ZUB1 1445 aa22.79■■□□□ 1.24
MBD1-215ENST00000586884 CDC42BPGQ6DT37 1551 aa22.79■■□□□ 1.24
MBD1-215ENST00000586884 ANKRD30BQ9BXX2 1392 aa22.78■■□□□ 1.24
MBD1-215ENST00000586884 ADGRF5Q8IZF2 1346 aa22.78■■□□□ 1.24
MBD1-215ENST00000586884 TECPR2O15040 1411 aa22.77■■□□□ 1.24
MBD1-215ENST00000586884 RBM6P78332 1123 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms