RNA–Protein interactions for RNA: ENST00000586835.1

TMED1-202, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2

Gene TMED1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-202ENST00000586835 ADGRB3O60242 1522 aa20.2■□□□□ 0.82
TMED1-202ENST00000586835 SCAF11Q99590 1463 aaKnown RBP20.19■□□□□ 0.82
TMED1-202ENST00000586835 ZNF335Q9H4Z2 1342 aaPredicted RBP20.19■□□□□ 0.82
TMED1-202ENST00000586835 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
TMED1-202ENST00000586835 IQGAP1P46940 1657 aa20.17■□□□□ 0.82
TMED1-202ENST00000586835 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
TMED1-202ENST00000586835 TMEM131LA2VDJ0 1609 aa20.15■□□□□ 0.82
TMED1-202ENST00000586835 SPHKAPQ2M3C7 1700 aa20.13■□□□□ 0.81
TMED1-202ENST00000586835 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
TMED1-202ENST00000586835 TONSLQ96HA7 1378 aa20.12■□□□□ 0.81
TMED1-202ENST00000586835 CHGAP10645 457 aaKnown RBP20.11■□□□□ 0.81
TMED1-202ENST00000586835 FOXD1Q16676 465 aa20.11■□□□□ 0.81
TMED1-202ENST00000586835 TRPM2O94759 1503 aa20.11■□□□□ 0.81
TMED1-202ENST00000586835 ZFYVE9O95405 1425 aa20.1■□□□□ 0.81
TMED1-202ENST00000586835 NEUROD1Q13562 356 aa20.1■□□□□ 0.81
TMED1-202ENST00000586835 HDGFP51858 240 aaKnown RBP20.09■□□□□ 0.81
TMED1-202ENST00000586835 IQSEC2Q5JU85 1478 aa20.09■□□□□ 0.81
TMED1-202ENST00000586835 CCDC144AA2RUR9 1427 aa20.08■□□□□ 0.8
TMED1-202ENST00000586835 RIMS2Q9UQ26 1411 aa20.08■□□□□ 0.8
TMED1-202ENST00000586835 CPS1P31327 1500 aa20.07■□□□□ 0.8
TMED1-202ENST00000586835 PPP1R15AO75807 674 aaPredicted RBP20.06■□□□□ 0.8
TMED1-202ENST00000586835 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
TMED1-202ENST00000586835 CLTCL1P53675 1640 aa20.04■□□□□ 0.8
TMED1-202ENST00000586835 PLEKHG1Q9ULL1 1385 aa20.03■□□□□ 0.8
TMED1-202ENST00000586835 STAC3Q96MF2 364 aa20.02■□□□□ 0.8
TMED1-202ENST00000586835 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
TMED1-202ENST00000586835 STRCP1A6NGW2 1772 aa20.02■□□□□ 0.8
TMED1-202ENST00000586835 NUTM2DQ5VT03 806 aaPredicted RBP20■□□□□ 0.79
TMED1-202ENST00000586835 BCANQ96GW7 911 aa20■□□□□ 0.79
TMED1-202ENST00000586835 KIF1BO60333 1816 aa19.98■□□□□ 0.79
TMED1-202ENST00000586835 ZNF326Q5BKZ1 582 aaKnown RBP19.98■□□□□ 0.79
TMED1-202ENST00000586835 L3MBTL2Q969R5 705 aa19.98■□□□□ 0.79
TMED1-202ENST00000586835 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
TMED1-202ENST00000586835 SPATA31E1Q6ZUB1 1445 aa19.96■□□□□ 0.79
TMED1-202ENST00000586835 KCNA6P17658 529 aa19.96■□□□□ 0.79
TMED1-202ENST00000586835 TBX22Q9Y458 520 aa19.96■□□□□ 0.79
TMED1-202ENST00000586835 LRRC7Q96NW7 1537 aa19.96■□□□□ 0.79
TMED1-202ENST00000586835 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
TMED1-202ENST00000586835 UBAP1LF5GYI3 381 aa19.93■□□□□ 0.78
TMED1-202ENST00000586835 NEXMIFQ5QGS0 1516 aa19.92■□□□□ 0.78
TMED1-202ENST00000586835 RPGRIP1LQ68CZ1 1315 aa19.91■□□□□ 0.78
TMED1-202ENST00000586835 DIP2AQ14689 1571 aa19.9■□□□□ 0.78
TMED1-202ENST00000586835 NWD1Q149M9 1564 aa19.9■□□□□ 0.78
TMED1-202ENST00000586835 CHD2O14647 1828 aaKnown RBP19.88■□□□□ 0.77
TMED1-202ENST00000586835 SETBP1Q9Y6X0 1596 aa19.88■□□□□ 0.77
TMED1-202ENST00000586835 PIK3R4Q99570 1358 aa19.88■□□□□ 0.77
TMED1-202ENST00000586835 TOM1O60784 492 aa19.88■□□□□ 0.77
TMED1-202ENST00000586835 NRXN3Q9Y4C0 1643 aa19.87■□□□□ 0.77
TMED1-202ENST00000586835 VGFO15240 615 aaPredicted RBP19.87■□□□□ 0.77
TMED1-202ENST00000586835 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
TMED1-202ENST00000586835 XIRP1Q702N8 1843 aaKnown RBP19.86■□□□□ 0.77
TMED1-202ENST00000586835 PROSER2Q86WR7 435 aaPredicted RBP19.86■□□□□ 0.77
TMED1-202ENST00000586835 TMEM94Q12767 1356 aa19.85■□□□□ 0.77
TMED1-202ENST00000586835 PPLO60437 1756 aa19.83■□□□□ 0.77
TMED1-202ENST00000586835 RGL3Q3MIN7 710 aa19.83■□□□□ 0.77
TMED1-202ENST00000586835 ALKQ9UM73 1620 aa19.83■□□□□ 0.76
TMED1-202ENST00000586835 IFT172Q9UG01 1749 aa19.82■□□□□ 0.76
TMED1-202ENST00000586835 MYOM2P54296 1465 aa19.82■□□□□ 0.76
TMED1-202ENST00000586835 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
TMED1-202ENST00000586835 DCAF11Q8TEB1 546 aa19.81■□□□□ 0.76
TMED1-202ENST00000586835 RBM33Q96EV2 1170 aaKnown RBP19.81■□□□□ 0.76
TMED1-202ENST00000586835 PRAG1Q86YV5 1406 aa19.81■□□□□ 0.76
TMED1-202ENST00000586835 PTPRUQ92729 1446 aa19.81■□□□□ 0.76
TMED1-202ENST00000586835 ZNF316A6NFI3 1004 aaPredicted RBP19.8■□□□□ 0.76
TMED1-202ENST00000586835 AMOTL2Q9Y2J4 779 aa19.8■□□□□ 0.76
TMED1-202ENST00000586835 METP08581 1390 aa19.8■□□□□ 0.76
TMED1-202ENST00000586835 PIP4K2BP78356 416 aa19.79■□□□□ 0.76
TMED1-202ENST00000586835 NBPF8Q3BBV2 869 aa19.79■□□□□ 0.76
TMED1-202ENST00000586835 KIAA1210Q9ULL0 1709 aa19.78■□□□□ 0.76
TMED1-202ENST00000586835 NRXN1Q9ULB1 1477 aa19.77■□□□□ 0.76
TMED1-202ENST00000586835 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
TMED1-202ENST00000586835 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
TMED1-202ENST00000586835 NCOA3Q9Y6Q9 1424 aa19.76■□□□□ 0.75
TMED1-202ENST00000586835 LAMC1P11047 1609 aa19.76■□□□□ 0.75
TMED1-202ENST00000586835 XRN1Q8IZH2 1706 aaKnown RBP19.76■□□□□ 0.75
TMED1-202ENST00000586835 TRPM1Q7Z4N2 1603 aa19.76■□□□□ 0.75
TMED1-202ENST00000586835 GPRASP1Q5JY77 1395 aa19.75■□□□□ 0.75
TMED1-202ENST00000586835 SETD1AO15047 1707 aaKnown RBP19.75■□□□□ 0.75
TMED1-202ENST00000586835 MSH6P52701 1360 aa19.73■□□□□ 0.75
TMED1-202ENST00000586835 KDM2AQ9Y2K7 1162 aa19.71■□□□□ 0.75
TMED1-202ENST00000586835 HSPA1LP34931 641 aa19.7■□□□□ 0.74
TMED1-202ENST00000586835 EIF4G2P78344 907 aaKnown RBP eCLIP19.7■□□□□ 0.74
TMED1-202ENST00000586835 C14orf37Q86TY3 774 aa19.7■□□□□ 0.74
TMED1-202ENST00000586835 PIK3C2GO75747 1445 aa19.69■□□□□ 0.74
TMED1-202ENST00000586835 C19orf44Q9H6X5 657 aa19.69■□□□□ 0.74
TMED1-202ENST00000586835 FAM135BQ49AJ0 1406 aa19.68■□□□□ 0.74
TMED1-202ENST00000586835 SLAIN2Q9P270 581 aa19.66■□□□□ 0.74
TMED1-202ENST00000586835 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.65■□□□□ 0.74
TMED1-202ENST00000586835 C14orf93Q9H972 538 aaKnown RBP19.65■□□□□ 0.74
TMED1-202ENST00000586835 ROCK2O75116 1388 aaKnown RBP19.65■□□□□ 0.74
TMED1-202ENST00000586835 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
TMED1-202ENST00000586835 CADPS2Q86UW7 1296 aa19.64■□□□□ 0.73
TMED1-202ENST00000586835 ROBO2Q9HCK4 1378 aa19.64■□□□□ 0.73
TMED1-202ENST00000586835 ATF3P18847 181 aa19.63■□□□□ 0.73
TMED1-202ENST00000586835 CARD11Q9BXL7 1154 aa19.63■□□□□ 0.73
TMED1-202ENST00000586835 TMEM132EQ6IEE7 984 aa19.62■□□□□ 0.73
TMED1-202ENST00000586835 ASXL1Q8IXJ9 1541 aa19.61■□□□□ 0.73
TMED1-202ENST00000586835 DCCP43146 1447 aa19.61■□□□□ 0.73
TMED1-202ENST00000586835 ADGRL3Q9HAR2 1447 aa19.61■□□□□ 0.73
TMED1-202ENST00000586835 LRPPRCP42704 1394 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms