RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 HSPA1LP34931 641 aa25.74■■□□□ 1.71
TRIM47-203ENST00000586495 RIMS2Q9UQ26 1411 aa25.72■■□□□ 1.71
TRIM47-203ENST00000586495 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.72■■□□□ 1.71
TRIM47-203ENST00000586495 ZFYVE9O95405 1425 aa25.71■■□□□ 1.71
TRIM47-203ENST00000586495 TMEM131LA2VDJ0 1609 aa25.7■■□□□ 1.71
TRIM47-203ENST00000586495 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
TRIM47-203ENST00000586495 ALKQ9UM73 1620 aa25.69■■□□□ 1.7
TRIM47-203ENST00000586495 MYO5BQ9ULV0 1848 aa25.68■■□□□ 1.7
TRIM47-203ENST00000586495 PROSER2Q86WR7 435 aaPredicted RBP25.66■■□□□ 1.7
TRIM47-203ENST00000586495 TMEM94Q12767 1356 aa25.64■■□□□ 1.69
TRIM47-203ENST00000586495 NAIPQ13075 1403 aa25.63■■□□□ 1.69
TRIM47-203ENST00000586495 SENP3Q9H4L4 574 aaPredicted RBP25.63■■□□□ 1.69
TRIM47-203ENST00000586495 TBX22Q9Y458 520 aa25.62■■□□□ 1.69
TRIM47-203ENST00000586495 NKTRP30414 1462 aaKnown RBP25.61■■□□□ 1.69
TRIM47-203ENST00000586495 XIRP1Q702N8 1843 aaKnown RBP25.61■■□□□ 1.69
TRIM47-203ENST00000586495 ILDR2Q71H61 639 aa25.61■■□□□ 1.69
TRIM47-203ENST00000586495 NWD1Q149M9 1564 aa25.6■■□□□ 1.69
TRIM47-203ENST00000586495 NUTM2DQ5VT03 806 aaPredicted RBP25.59■■□□□ 1.69
TRIM47-203ENST00000586495 HFM1A2PYH4 1435 aa25.57■■□□□ 1.68
TRIM47-203ENST00000586495 TRIM52Q96A61 297 aa25.56■■□□□ 1.68
TRIM47-203ENST00000586495 SPHKAPQ2M3C7 1700 aa25.56■■□□□ 1.68
TRIM47-203ENST00000586495 RBM33Q96EV2 1170 aaKnown RBP25.55■■□□□ 1.68
TRIM47-203ENST00000586495 CHD2O14647 1828 aaKnown RBP25.53■■□□□ 1.68
TRIM47-203ENST00000586495 ZNF326Q5BKZ1 582 aaKnown RBP25.53■■□□□ 1.68
TRIM47-203ENST00000586495 MSH6P52701 1360 aa25.53■■□□□ 1.68
TRIM47-203ENST00000586495 FAM135BQ49AJ0 1406 aa25.53■■□□□ 1.68
TRIM47-203ENST00000586495 ADAMTS13Q76LX8 1427 aa25.53■■□□□ 1.68
TRIM47-203ENST00000586495 DIP2AQ14689 1571 aa25.52■■□□□ 1.68
TRIM47-203ENST00000586495 PIK3R4Q99570 1358 aa25.52■■□□□ 1.68
TRIM47-203ENST00000586495 MED1Q15648 1581 aaPredicted RBP25.49■■□□□ 1.67
TRIM47-203ENST00000586495 NCOA3Q9Y6Q9 1424 aa25.48■■□□□ 1.67
TRIM47-203ENST00000586495 TRPM2O94759 1503 aa25.47■■□□□ 1.67
TRIM47-203ENST00000586495 SOCS7O14512 581 aa25.47■■□□□ 1.67
TRIM47-203ENST00000586495 SLC4A1APQ9BWU0 796 aaKnown RBP25.47■■□□□ 1.67
TRIM47-203ENST00000586495 C14orf37Q86TY3 774 aa25.45■■□□□ 1.66
TRIM47-203ENST00000586495 SLAIN2Q9P270 581 aa25.44■■□□□ 1.66
TRIM47-203ENST00000586495 CLTCL1P53675 1640 aa25.44■■□□□ 1.66
TRIM47-203ENST00000586495 AMOTL2Q9Y2J4 779 aa25.43■■□□□ 1.66
TRIM47-203ENST00000586495 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
TRIM47-203ENST00000586495 KIF1BO60333 1816 aa25.4■■□□□ 1.66
TRIM47-203ENST00000586495 SETBP1Q9Y6X0 1596 aa25.39■■□□□ 1.66
TRIM47-203ENST00000586495 ROBO1Q9Y6N7 1651 aa25.39■■□□□ 1.66
TRIM47-203ENST00000586495 C19orf44Q9H6X5 657 aa25.39■■□□□ 1.66
TRIM47-203ENST00000586495 CADPS2Q86UW7 1296 aa25.38■■□□□ 1.65
TRIM47-203ENST00000586495 PTPRUQ92729 1446 aa25.37■■□□□ 1.65
TRIM47-203ENST00000586495 NEXMIFQ5QGS0 1516 aa25.37■■□□□ 1.65
TRIM47-203ENST00000586495 ATF3P18847 181 aa25.36■■□□□ 1.65
TRIM47-203ENST00000586495 NRXN3Q9Y4C0 1643 aa25.36■■□□□ 1.65
TRIM47-203ENST00000586495 VGFO15240 615 aaPredicted RBP25.35■■□□□ 1.65
TRIM47-203ENST00000586495 RPGRIP1LQ68CZ1 1315 aa25.35■■□□□ 1.65
TRIM47-203ENST00000586495 ACIN1Q9UKV3 1341 aaKnown RBP25.34■■□□□ 1.65
TRIM47-203ENST00000586495 METP08581 1390 aa25.32■■□□□ 1.64
TRIM47-203ENST00000586495 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.3■■□□□ 1.64
TRIM47-203ENST00000586495 FOXD1Q16676 465 aa25.29■■□□□ 1.64
TRIM47-203ENST00000586495 MPHOSPH9Q99550 1183 aa25.29■■□□□ 1.64
TRIM47-203ENST00000586495 XRN1Q8IZH2 1706 aaKnown RBP25.29■■□□□ 1.64
TRIM47-203ENST00000586495 DCCP43146 1447 aa25.27■■□□□ 1.64
TRIM47-203ENST00000586495 CCDC144AA2RUR9 1427 aa25.26■■□□□ 1.63
TRIM47-203ENST00000586495 PHLPP1O60346 1717 aa25.26■■□□□ 1.63
TRIM47-203ENST00000586495 JCADQ9P266 1359 aa25.23■■□□□ 1.63
TRIM47-203ENST00000586495 SETD5Q9C0A6 1442 aa25.22■■□□□ 1.63
TRIM47-203ENST00000586495 BRINP3Q76B58 766 aa25.19■■□□□ 1.62
TRIM47-203ENST00000586495 PPLO60437 1756 aa25.18■■□□□ 1.62
TRIM47-203ENST00000586495 RGL3Q3MIN7 710 aa25.18■■□□□ 1.62
TRIM47-203ENST00000586495 ADGRL3Q9HAR2 1447 aa25.18■■□□□ 1.62
TRIM47-203ENST00000586495 RGS17Q9UGC6 210 aaPredicted RBP25.17■■□□□ 1.62
TRIM47-203ENST00000586495 COL16A1Q07092 1604 aaPredicted RBP25.16■■□□□ 1.62
TRIM47-203ENST00000586495 AHDC1Q5TGY3 1603 aaPredicted RBP25.16■■□□□ 1.62
TRIM47-203ENST00000586495 PTCH1Q13635 1447 aa25.16■■□□□ 1.62
TRIM47-203ENST00000586495 MST1RQ04912 1400 aa25.15■■□□□ 1.62
TRIM47-203ENST00000586495 ANKRD30BQ9BXX2 1392 aa25.15■■□□□ 1.62
TRIM47-203ENST00000586495 SPATA31E1Q6ZUB1 1445 aa25.13■■□□□ 1.61
TRIM47-203ENST00000586495 SETD1AO15047 1707 aaKnown RBP25.13■■□□□ 1.61
TRIM47-203ENST00000586495 SPATA31A6Q5VVP1 1343 aa25.12■■□□□ 1.61
TRIM47-203ENST00000586495 PRAG1Q86YV5 1406 aa25.12■■□□□ 1.61
TRIM47-203ENST00000586495 ADGRF5Q8IZF2 1346 aa25.12■■□□□ 1.61
TRIM47-203ENST00000586495 ROBO2Q9HCK4 1378 aa25.11■■□□□ 1.61
TRIM47-203ENST00000586495 RAB3GAP2Q9H2M9 1393 aa25.1■■□□□ 1.61
TRIM47-203ENST00000586495 ASXL1Q8IXJ9 1541 aa25.1■■□□□ 1.61
TRIM47-203ENST00000586495 NALCNQ8IZF0 1738 aa25.08■■□□□ 1.61
TRIM47-203ENST00000586495 MEX3CQ5U5Q3 659 aaKnown RBP25.05■■□□□ 1.6
TRIM47-203ENST00000586495 POTEAQ6S8J7 498 aa25.05■■□□□ 1.6
TRIM47-203ENST00000586495 LRRC59Q96AG4 307 aaKnown RBP25.05■■□□□ 1.6
TRIM47-203ENST00000586495 C1orf167Q5SNV9 1468 aa25.04■■□□□ 1.6
TRIM47-203ENST00000586495 SHPRHQ149N8 1683 aa25.04■■□□□ 1.6
TRIM47-203ENST00000586495 IFT172Q9UG01 1749 aa25.03■■□□□ 1.6
TRIM47-203ENST00000586495 STK26Q9P289 416 aa25.01■■□□□ 1.59
TRIM47-203ENST00000586495 PIK3C2GO75747 1445 aa25.01■■□□□ 1.59
TRIM47-203ENST00000586495 NHSL1Q5SYE7 1610 aa25.01■■□□□ 1.59
TRIM47-203ENST00000586495 HRCP23327 699 aa25■■□□□ 1.59
TRIM47-203ENST00000586495 LRPPRCP42704 1394 aaKnown RBP25■■□□□ 1.59
TRIM47-203ENST00000586495 LRP6O75581 1613 aa24.99■■□□□ 1.59
TRIM47-203ENST00000586495 ABCC11Q96J66 1382 aa24.99■■□□□ 1.59
TRIM47-203ENST00000586495 TECPR2O15040 1411 aa24.98■■□□□ 1.59
TRIM47-203ENST00000586495 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
TRIM47-203ENST00000586495 DDX17Q92841 729 aaKnown RBP24.98■■□□□ 1.59
TRIM47-203ENST00000586495 NUTM2BA6NNL0 878 aaPredicted RBP24.97■■□□□ 1.59
TRIM47-203ENST00000586495 NUTM2EB1AL46 878 aaPredicted RBP24.97■■□□□ 1.59
TRIM47-203ENST00000586495 NUTM2AQ8IVF1 878 aaPredicted RBP24.97■■□□□ 1.59
TRIM47-203ENST00000586495 ORAI2Q96SN7 254 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms