RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TIMELESSQ9UNS1 1208 aa24.55■■□□□ 1.52
PRKCSH-203ENST00000586486 RGL3Q3MIN7 710 aa24.54■■□□□ 1.52
PRKCSH-203ENST00000586486 ZNF326Q5BKZ1 582 aaKnown RBP24.53■■□□□ 1.52
PRKCSH-203ENST00000586486 MYOM2P54296 1465 aa24.52■■□□□ 1.52
PRKCSH-203ENST00000586486 RIMS2Q9UQ26 1411 aa24.52■■□□□ 1.52
PRKCSH-203ENST00000586486 L3MBTL2Q969R5 705 aa24.5■■□□□ 1.51
PRKCSH-203ENST00000586486 STAC3Q96MF2 364 aa24.5■■□□□ 1.51
PRKCSH-203ENST00000586486 POLR1AO95602 1720 aaPredicted RBP24.49■■□□□ 1.51
PRKCSH-203ENST00000586486 NRXN1Q9ULB1 1477 aa24.47■■□□□ 1.51
PRKCSH-203ENST00000586486 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.46■■□□□ 1.51
PRKCSH-203ENST00000586486 SCAF11Q99590 1463 aaKnown RBP24.46■■□□□ 1.51
PRKCSH-203ENST00000586486 HDGFP51858 240 aaKnown RBP24.46■■□□□ 1.51
PRKCSH-203ENST00000586486 DCAF11Q8TEB1 546 aa24.46■■□□□ 1.51
PRKCSH-203ENST00000586486 VGFO15240 615 aaPredicted RBP24.43■■□□□ 1.5
PRKCSH-203ENST00000586486 EID1Q9Y6B2 187 aa24.43■■□□□ 1.5
PRKCSH-203ENST00000586486 PIK3C2GO75747 1445 aa24.41■■□□□ 1.5
PRKCSH-203ENST00000586486 LTKP29376 864 aa24.41■■□□□ 1.5
PRKCSH-203ENST00000586486 SETBP1Q9Y6X0 1596 aa24.4■■□□□ 1.5
PRKCSH-203ENST00000586486 MED14O60244 1454 aa24.4■■□□□ 1.5
PRKCSH-203ENST00000586486 PRAG1Q86YV5 1406 aa24.4■■□□□ 1.5
PRKCSH-203ENST00000586486 PLEKHG1Q9ULL1 1385 aa24.4■■□□□ 1.5
PRKCSH-203ENST00000586486 TXNDC2Q86VQ3 553 aa24.4■■□□□ 1.5
PRKCSH-203ENST00000586486 ANKLE2Q86XL3 938 aa24.4■■□□□ 1.5
PRKCSH-203ENST00000586486 HSPA2P54652 639 aa24.39■■□□□ 1.5
PRKCSH-203ENST00000586486 ADGRF5Q8IZF2 1346 aa24.39■■□□□ 1.49
PRKCSH-203ENST00000586486 PPP1R15AO75807 674 aaPredicted RBP24.39■■□□□ 1.49
PRKCSH-203ENST00000586486 NRXN3Q9Y4C0 1643 aa24.38■■□□□ 1.49
PRKCSH-203ENST00000586486 STRCQ7RTU9 1775 aa24.38■■□□□ 1.49
PRKCSH-203ENST00000586486 LAMC1P11047 1609 aa24.38■■□□□ 1.49
PRKCSH-203ENST00000586486 KDM2AQ9Y2K7 1162 aa24.38■■□□□ 1.49
PRKCSH-203ENST00000586486 IQGAP1P46940 1657 aa24.37■■□□□ 1.49
PRKCSH-203ENST00000586486 NUTM2DQ5VT03 806 aaPredicted RBP24.37■■□□□ 1.49
PRKCSH-203ENST00000586486 KIAA1210Q9ULL0 1709 aa24.37■■□□□ 1.49
PRKCSH-203ENST00000586486 ZEB1P37275 1124 aaPredicted RBP24.35■■□□□ 1.49
PRKCSH-203ENST00000586486 SETD1AO15047 1707 aaKnown RBP24.34■■□□□ 1.49
PRKCSH-203ENST00000586486 DIP2AQ14689 1571 aa24.34■■□□□ 1.49
PRKCSH-203ENST00000586486 TRPM1Q7Z4N2 1603 aa24.34■■□□□ 1.49
PRKCSH-203ENST00000586486 NPHP4O75161 1426 aaPredicted RBP24.33■■□□□ 1.49
PRKCSH-203ENST00000586486 NCKAP5LQ9HCH0 1330 aa24.31■■□□□ 1.48
PRKCSH-203ENST00000586486 ALKQ9UM73 1620 aa24.31■■□□□ 1.48
PRKCSH-203ENST00000586486 ADAMTS13Q76LX8 1427 aa24.3■■□□□ 1.48
PRKCSH-203ENST00000586486 RALGAPBQ86X10 1494 aa24.29■■□□□ 1.48
PRKCSH-203ENST00000586486 NBPF8Q3BBV2 869 aa24.28■■□□□ 1.48
PRKCSH-203ENST00000586486 C14orf93Q9H972 538 aaKnown RBP24.27■■□□□ 1.48
PRKCSH-203ENST00000586486 ASXL1Q8IXJ9 1541 aa24.25■■□□□ 1.47
PRKCSH-203ENST00000586486 ADGRB1O14514 1584 aa24.24■■□□□ 1.47
PRKCSH-203ENST00000586486 CFAP70Q5T0N1 1121 aa24.23■■□□□ 1.47
PRKCSH-203ENST00000586486 TBX22Q9Y458 520 aa24.23■■□□□ 1.47
PRKCSH-203ENST00000586486 BCANQ96GW7 911 aa24.22■■□□□ 1.47
PRKCSH-203ENST00000586486 GPRASP1Q5JY77 1395 aa24.21■■□□□ 1.47
PRKCSH-203ENST00000586486 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
PRKCSH-203ENST00000586486 SLC26A8Q96RN1 970 aa24.2■■□□□ 1.46
PRKCSH-203ENST00000586486 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
PRKCSH-203ENST00000586486 ROCK2O75116 1388 aaKnown RBP24.18■■□□□ 1.46
PRKCSH-203ENST00000586486 DMRT2Q9Y5R5 561 aa24.18■■□□□ 1.46
PRKCSH-203ENST00000586486 METP08581 1390 aa24.18■■□□□ 1.46
PRKCSH-203ENST00000586486 CHD2O14647 1828 aaKnown RBP24.16■■□□□ 1.46
PRKCSH-203ENST00000586486 KNDC1Q76NI1 1749 aa24.16■■□□□ 1.46
PRKCSH-203ENST00000586486 NBPF1Q3BBV0 1214 aa24.16■■□□□ 1.46
PRKCSH-203ENST00000586486 NWD1Q149M9 1564 aa24.15■■□□□ 1.46
PRKCSH-203ENST00000586486 XRN1Q8IZH2 1706 aaKnown RBP24.15■■□□□ 1.46
PRKCSH-203ENST00000586486 YTHDC2Q9H6S0 1430 aaKnown RBP24.14■■□□□ 1.45
PRKCSH-203ENST00000586486 TMEM132EQ6IEE7 984 aa24.12■■□□□ 1.45
PRKCSH-203ENST00000586486 LRPPRCP42704 1394 aaKnown RBP24.12■■□□□ 1.45
PRKCSH-203ENST00000586486 TECPR2O15040 1411 aa24.11■■□□□ 1.45
PRKCSH-203ENST00000586486 PTPRUQ92729 1446 aa24.11■■□□□ 1.45
PRKCSH-203ENST00000586486 CPS1P31327 1500 aa24.1■■□□□ 1.45
PRKCSH-203ENST00000586486 DLC1Q96QB1 1528 aa24.09■■□□□ 1.45
PRKCSH-203ENST00000586486 ARHGEF28Q8N1W1 1705 aaKnown RBP24.09■■□□□ 1.45
PRKCSH-203ENST00000586486 ABCC11Q96J66 1382 aa24.09■■□□□ 1.45
PRKCSH-203ENST00000586486 CARD11Q9BXL7 1154 aa24.09■■□□□ 1.45
PRKCSH-203ENST00000586486 PTCH1Q13635 1447 aa24.07■■□□□ 1.44
PRKCSH-203ENST00000586486 NKTRP30414 1462 aaKnown RBP24.06■■□□□ 1.44
PRKCSH-203ENST00000586486 STRCP1A6NGW2 1772 aa24.06■■□□□ 1.44
PRKCSH-203ENST00000586486 KCNA6P17658 529 aa24.05■■□□□ 1.44
PRKCSH-203ENST00000586486 AMOTL2Q9Y2J4 779 aa24.04■■□□□ 1.44
PRKCSH-203ENST00000586486 EIF3AQ14152 1382 aaKnown RBP24.02■■□□□ 1.44
PRKCSH-203ENST00000586486 USP47Q96K76 1375 aa24.02■■□□□ 1.44
PRKCSH-203ENST00000586486 FAM135BQ49AJ0 1406 aa24.02■■□□□ 1.44
PRKCSH-203ENST00000586486 SIRT1Q96EB6 747 aa24.01■■□□□ 1.43
PRKCSH-203ENST00000586486 STK26Q9P289 416 aa24.01■■□□□ 1.43
PRKCSH-203ENST00000586486 TRAK1Q9UPV9 953 aa24■■□□□ 1.43
PRKCSH-203ENST00000586486 ROBO2Q9HCK4 1378 aa23.99■■□□□ 1.43
PRKCSH-203ENST00000586486 ZNF335Q9H4Z2 1342 aaPredicted RBP23.98■■□□□ 1.43
PRKCSH-203ENST00000586486 QRICH2Q9H0J4 1663 aa23.97■■□□□ 1.43
PRKCSH-203ENST00000586486 EIF4G2P78344 907 aaKnown RBP eCLIP23.95■■□□□ 1.43
PRKCSH-203ENST00000586486 LTBP4Q8N2S1 1624 aa23.94■■□□□ 1.42
PRKCSH-203ENST00000586486 PRAM1Q96QH2 718 aa23.93■■□□□ 1.42
PRKCSH-203ENST00000586486 SBNO2Q9Y2G9 1366 aa23.93■■□□□ 1.42
PRKCSH-203ENST00000586486 CENPJQ9HC77 1338 aaPredicted RBP23.93■■□□□ 1.42
PRKCSH-203ENST00000586486 PLEKHH1Q9ULM0 1364 aa23.92■■□□□ 1.42
PRKCSH-203ENST00000586486 NCOA3Q9Y6Q9 1424 aa23.91■■□□□ 1.42
PRKCSH-203ENST00000586486 ADGRB2O60241 1585 aa23.91■■□□□ 1.42
PRKCSH-203ENST00000586486 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.9■■□□□ 1.42
PRKCSH-203ENST00000586486 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
PRKCSH-203ENST00000586486 XIRP1Q702N8 1843 aaKnown RBP23.9■■□□□ 1.42
PRKCSH-203ENST00000586486 HSPA5P11021 654 aaKnown RBP23.9■■□□□ 1.42
PRKCSH-203ENST00000586486 POGKQ9P215 609 aa23.9■■□□□ 1.42
PRKCSH-203ENST00000586486 NALCNQ8IZF0 1738 aa23.9■■□□□ 1.42
PRKCSH-203ENST00000586486 ST20-MTHFSA0A0A6YYL1 179 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms