RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 ZNF326Q5BKZ1 582 aaKnown RBP11.84□□□□□ -0.51
TREM1-203ENST00000586287 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
TREM1-203ENST00000586287 UHRF1BP1Q6BDS2 1440 aa11.84□□□□□ -0.51
TREM1-203ENST00000586287 TMEM2Q9UHN6 1383 aa11.83□□□□□ -0.52
TREM1-203ENST00000586287 NEXMIFQ5QGS0 1516 aa11.83□□□□□ -0.52
TREM1-203ENST00000586287 NBPF8Q3BBV2 869 aa11.83□□□□□ -0.52
TREM1-203ENST00000586287 THEMISQ8N1K5 641 aaPredicted RBP11.83□□□□□ -0.52
TREM1-203ENST00000586287 STAC3Q96MF2 364 aa11.83□□□□□ -0.52
TREM1-203ENST00000586287 ZNF142P52746 1687 aaPredicted RBP11.83□□□□□ -0.52
TREM1-203ENST00000586287 ZFYVE9O95405 1425 aa11.83□□□□□ -0.52
TREM1-203ENST00000586287 ADGRF5Q8IZF2 1346 aa11.83□□□□□ -0.52
TREM1-203ENST00000586287 ARHGAP23Q9P227 1491 aa11.83□□□□□ -0.52
TREM1-203ENST00000586287 RIMS2Q9UQ26 1411 aa11.82□□□□□ -0.52
TREM1-203ENST00000586287 SLIT1O75093 1534 aa11.81□□□□□ -0.52
TREM1-203ENST00000586287 IFT172Q9UG01 1749 aa11.81□□□□□ -0.52
TREM1-203ENST00000586287 ADRA2BP18089 450 aa11.81□□□□□ -0.52
TREM1-203ENST00000586287 LTKP29376 864 aa11.81□□□□□ -0.52
TREM1-203ENST00000586287 NUTM2DQ5VT03 806 aaPredicted RBP11.81□□□□□ -0.52
TREM1-203ENST00000586287 MYOM2P54296 1465 aa11.81□□□□□ -0.52
TREM1-203ENST00000586287 NRXN1Q9ULB1 1477 aa11.81□□□□□ -0.52
TREM1-203ENST00000586287 PPLO60437 1756 aa11.8□□□□□ -0.52
TREM1-203ENST00000586287 VGFO15240 615 aaPredicted RBP11.8□□□□□ -0.52
TREM1-203ENST00000586287 PRAG1Q86YV5 1406 aa11.79□□□□□ -0.52
TREM1-203ENST00000586287 LMTK3Q96Q04 1460 aa11.79□□□□□ -0.52
TREM1-203ENST00000586287 TXNDC2Q86VQ3 553 aa11.78□□□□□ -0.52
TREM1-203ENST00000586287 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.78□□□□□ -0.52
TREM1-203ENST00000586287 FBXO41Q8TF61 875 aa11.78□□□□□ -0.52
TREM1-203ENST00000586287 PIK3C2GO75747 1445 aa11.77□□□□□ -0.52
TREM1-203ENST00000586287 HDGFP51858 240 aaKnown RBP11.77□□□□□ -0.53
TREM1-203ENST00000586287 HSPA2P54652 639 aa11.76□□□□□ -0.53
TREM1-203ENST00000586287 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
TREM1-203ENST00000586287 C14orf93Q9H972 538 aaKnown RBP11.76□□□□□ -0.53
TREM1-203ENST00000586287 NBPF1Q3BBV0 1214 aa11.75□□□□□ -0.53
TREM1-203ENST00000586287 CFAP70Q5T0N1 1121 aa11.75□□□□□ -0.53
TREM1-203ENST00000586287 ANKLE2Q86XL3 938 aa11.75□□□□□ -0.53
TREM1-203ENST00000586287 EID1Q9Y6B2 187 aa11.75□□□□□ -0.53
TREM1-203ENST00000586287 SCAF11Q99590 1463 aaKnown RBP11.75□□□□□ -0.53
TREM1-203ENST00000586287 PLEKHG1Q9ULL1 1385 aa11.74□□□□□ -0.53
TREM1-203ENST00000586287 ADAMTS13Q76LX8 1427 aa11.73□□□□□ -0.53
TREM1-203ENST00000586287 NCKAP5LQ9HCH0 1330 aa11.73□□□□□ -0.53
TREM1-203ENST00000586287 TRPM1Q7Z4N2 1603 aa11.72□□□□□ -0.53
TREM1-203ENST00000586287 NRXN3Q9Y4C0 1643 aa11.72□□□□□ -0.53
TREM1-203ENST00000586287 SETBP1Q9Y6X0 1596 aa11.72□□□□□ -0.53
TREM1-203ENST00000586287 MED14O60244 1454 aa11.72□□□□□ -0.53
TREM1-203ENST00000586287 RALGAPBQ86X10 1494 aa11.72□□□□□ -0.53
TREM1-203ENST00000586287 GPRASP1Q5JY77 1395 aa11.71□□□□□ -0.53
TREM1-203ENST00000586287 ALKQ9UM73 1620 aa11.71□□□□□ -0.54
TREM1-203ENST00000586287 TMEM132EQ6IEE7 984 aa11.7□□□□□ -0.54
TREM1-203ENST00000586287 TBX22Q9Y458 520 aa11.7□□□□□ -0.54
TREM1-203ENST00000586287 ADGRB1O14514 1584 aa11.7□□□□□ -0.54
TREM1-203ENST00000586287 NPHP4O75161 1426 aaPredicted RBP11.69□□□□□ -0.54
TREM1-203ENST00000586287 KIAA1210Q9ULL0 1709 aa11.69□□□□□ -0.54
TREM1-203ENST00000586287 ROCK2O75116 1388 aaKnown RBP11.69□□□□□ -0.54
TREM1-203ENST00000586287 METP08581 1390 aa11.69□□□□□ -0.54
TREM1-203ENST00000586287 SLC26A8Q96RN1 970 aa11.69□□□□□ -0.54
TREM1-203ENST00000586287 ASXL1Q8IXJ9 1541 aa11.69□□□□□ -0.54
TREM1-203ENST00000586287 SETD1AO15047 1707 aaKnown RBP11.69□□□□□ -0.54
TREM1-203ENST00000586287 IQGAP1P46940 1657 aa11.68□□□□□ -0.54
TREM1-203ENST00000586287 CARD11Q9BXL7 1154 aa11.68□□□□□ -0.54
TREM1-203ENST00000586287 STRCQ7RTU9 1775 aa11.67□□□□□ -0.54
TREM1-203ENST00000586287 BCANQ96GW7 911 aa11.67□□□□□ -0.54
TREM1-203ENST00000586287 LAMC1P11047 1609 aa11.67□□□□□ -0.54
TREM1-203ENST00000586287 POLR1AO95602 1720 aaPredicted RBP11.66□□□□□ -0.54
TREM1-203ENST00000586287 PTPRUQ92729 1446 aa11.65□□□□□ -0.54
TREM1-203ENST00000586287 DIP2AQ14689 1571 aa11.65□□□□□ -0.54
TREM1-203ENST00000586287 YTHDC2Q9H6S0 1430 aaKnown RBP11.64□□□□□ -0.55
TREM1-203ENST00000586287 LRPPRCP42704 1394 aaKnown RBP11.64□□□□□ -0.55
TREM1-203ENST00000586287 ABCC11Q96J66 1382 aa11.64□□□□□ -0.55
TREM1-203ENST00000586287 HSPA5P11021 654 aaKnown RBP11.63□□□□□ -0.55
TREM1-203ENST00000586287 USP47Q96K76 1375 aa11.63□□□□□ -0.55
TREM1-203ENST00000586287 PIK3R4Q99570 1358 aa11.63□□□□□ -0.55
TREM1-203ENST00000586287 EIF4G2P78344 907 aaKnown RBP eCLIP11.62□□□□□ -0.55
TREM1-203ENST00000586287 STK26Q9P289 416 aa11.62□□□□□ -0.55
TREM1-203ENST00000586287 TRAK1Q9UPV9 953 aa11.62□□□□□ -0.55
TREM1-203ENST00000586287 AMOTL2Q9Y2J4 779 aa11.62□□□□□ -0.55
TREM1-203ENST00000586287 TECPR2O15040 1411 aa11.61□□□□□ -0.55
TREM1-203ENST00000586287 HIRIP3Q9BW71 556 aaPredicted RBP11.61□□□□□ -0.55
TREM1-203ENST00000586287 ROBO2Q9HCK4 1378 aa11.6□□□□□ -0.55
TREM1-203ENST00000586287 ST20-MTHFSA0A0A6YYL1 179 aa11.6□□□□□ -0.55
TREM1-203ENST00000586287 SIRT1Q96EB6 747 aa11.6□□□□□ -0.55
TREM1-203ENST00000586287 TESK2Q96S53 571 aa11.6□□□□□ -0.55
TREM1-203ENST00000586287 KCNA6P17658 529 aa11.59□□□□□ -0.55
TREM1-203ENST00000586287 DLC1Q96QB1 1528 aa11.59□□□□□ -0.55
TREM1-203ENST00000586287 CHD2O14647 1828 aaKnown RBP11.58□□□□□ -0.56
TREM1-203ENST00000586287 XRN1Q8IZH2 1706 aaKnown RBP11.58□□□□□ -0.56
TREM1-203ENST00000586287 PLEKHH1Q9ULM0 1364 aa11.58□□□□□ -0.56
TREM1-203ENST00000586287 WAPLQ7Z5K2 1190 aa11.58□□□□□ -0.56
TREM1-203ENST00000586287 PRAM1Q96QH2 718 aa11.58□□□□□ -0.56
TREM1-203ENST00000586287 DMRT2Q9Y5R5 561 aa11.58□□□□□ -0.56
TREM1-203ENST00000586287 CPS1P31327 1500 aa11.57□□□□□ -0.56
TREM1-203ENST00000586287 FAM135BQ49AJ0 1406 aa11.57□□□□□ -0.56
TREM1-203ENST00000586287 KNDC1Q76NI1 1749 aa11.57□□□□□ -0.56
TREM1-203ENST00000586287 ARHGEF28Q8N1W1 1705 aaKnown RBP11.57□□□□□ -0.56
TREM1-203ENST00000586287 EIF3AQ14152 1382 aaKnown RBP11.56□□□□□ -0.56
TREM1-203ENST00000586287 PTCH1Q13635 1447 aa11.56□□□□□ -0.56
TREM1-203ENST00000586287 NWD1Q149M9 1564 aa11.56□□□□□ -0.56
TREM1-203ENST00000586287 CENPJQ9HC77 1338 aaPredicted RBP11.56□□□□□ -0.56
TREM1-203ENST00000586287 C11orf95C9JLR9 678 aaPredicted RBP11.55□□□□□ -0.56
TREM1-203ENST00000586287 ZNF335Q9H4Z2 1342 aaPredicted RBP11.55□□□□□ -0.56
TREM1-203ENST00000586287 SBNO2Q9Y2G9 1366 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms