RNA–Protein interactions for RNA: ENST00000586074.1

PCSK4-204, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-204ENST00000586074 ROCK1Q13464 1354 aa29.28■■■□□ 2.28
PCSK4-204ENST00000586074 ZFYVE9O95405 1425 aa29.27■■■□□ 2.28
PCSK4-204ENST00000586074 FAM135BQ49AJ0 1406 aa29.27■■■□□ 2.28
PCSK4-204ENST00000586074 BCANQ96GW7 911 aa29.26■■■□□ 2.27
PCSK4-204ENST00000586074 PLEKHG1Q9ULL1 1385 aa29.25■■■□□ 2.27
PCSK4-204ENST00000586074 TMEM131LA2VDJ0 1609 aa29.24■■■□□ 2.27
PCSK4-204ENST00000586074 PROSER2Q86WR7 435 aaPredicted RBP29.24■■■□□ 2.27
PCSK4-204ENST00000586074 RIMS2Q9UQ26 1411 aa29.23■■■□□ 2.27
PCSK4-204ENST00000586074 PPP1R15AO75807 674 aaPredicted RBP29.23■■■□□ 2.27
PCSK4-204ENST00000586074 HDGFP51858 240 aaKnown RBP29.23■■■□□ 2.27
PCSK4-204ENST00000586074 MYO5BQ9ULV0 1848 aa29.22■■■□□ 2.27
PCSK4-204ENST00000586074 IQGAP3Q86VI3 1631 aa29.21■■■□□ 2.27
PCSK4-204ENST00000586074 E9PCH4 1651 aa29.2■■■□□ 2.26
PCSK4-204ENST00000586074 MSH6P52701 1360 aa29.18■■■□□ 2.26
PCSK4-204ENST00000586074 ROBO1Q9Y6N7 1651 aa29.18■■■□□ 2.26
PCSK4-204ENST00000586074 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.16■■■□□ 2.26
PCSK4-204ENST00000586074 RBM33Q96EV2 1170 aaKnown RBP29.15■■■□□ 2.26
PCSK4-204ENST00000586074 CHGAP10645 457 aaKnown RBP29.14■■■□□ 2.26
PCSK4-204ENST00000586074 DIP2AQ14689 1571 aa29.13■■■□□ 2.25
PCSK4-204ENST00000586074 CHD2O14647 1828 aaKnown RBP29.13■■■□□ 2.25
PCSK4-204ENST00000586074 NUP155O75694 1391 aa29.11■■■□□ 2.25
PCSK4-204ENST00000586074 TBX22Q9Y458 520 aa29.1■■■□□ 2.25
PCSK4-204ENST00000586074 ITGAEP38570 1179 aa29.07■■■□□ 2.24
PCSK4-204ENST00000586074 NCOA3Q9Y6Q9 1424 aa29.07■■■□□ 2.24
PCSK4-204ENST00000586074 ADAMTS13Q76LX8 1427 aa29.05■■■□□ 2.24
PCSK4-204ENST00000586074 PIK3R4Q99570 1358 aa29.05■■■□□ 2.24
PCSK4-204ENST00000586074 SLAIN2Q9P270 581 aa29.04■■■□□ 2.24
PCSK4-204ENST00000586074 TRPM2O94759 1503 aa29.02■■■□□ 2.24
PCSK4-204ENST00000586074 PHLPP1O60346 1717 aa29■■■□□ 2.23
PCSK4-204ENST00000586074 NUTM2DQ5VT03 806 aaPredicted RBP29■■■□□ 2.23
PCSK4-204ENST00000586074 C14orf37Q86TY3 774 aa29■■■□□ 2.23
PCSK4-204ENST00000586074 RGS17Q9UGC6 210 aaPredicted RBP29■■■□□ 2.23
PCSK4-204ENST00000586074 SPHKAPQ2M3C7 1700 aa28.99■■■□□ 2.23
PCSK4-204ENST00000586074 PPARGC1BQ86YN6 1023 aaKnown RBP28.95■■■□□ 2.22
PCSK4-204ENST00000586074 JCADQ9P266 1359 aa28.95■■■□□ 2.22
PCSK4-204ENST00000586074 CADPS2Q86UW7 1296 aa28.93■■■□□ 2.22
PCSK4-204ENST00000586074 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.92■■■□□ 2.22
PCSK4-204ENST00000586074 COL16A1Q07092 1604 aaPredicted RBP28.92■■■□□ 2.22
PCSK4-204ENST00000586074 SETBP1Q9Y6X0 1596 aa28.92■■■□□ 2.22
PCSK4-204ENST00000586074 C19orf44Q9H6X5 657 aa28.91■■■□□ 2.22
PCSK4-204ENST00000586074 ATF3P18847 181 aa28.9■■■□□ 2.22
PCSK4-204ENST00000586074 RRBP1Q9P2E9 1410 aaKnown RBP28.88■■■□□ 2.21
PCSK4-204ENST00000586074 NRXN3Q9Y4C0 1643 aa28.88■■■□□ 2.21
PCSK4-204ENST00000586074 AMOTL2Q9Y2J4 779 aa28.88■■■□□ 2.21
PCSK4-204ENST00000586074 AHDC1Q5TGY3 1603 aaPredicted RBP28.87■■■□□ 2.21
PCSK4-204ENST00000586074 PTPRUQ92729 1446 aa28.87■■■□□ 2.21
PCSK4-204ENST00000586074 XRN1Q8IZH2 1706 aaKnown RBP28.87■■■□□ 2.21
PCSK4-204ENST00000586074 ZNF326Q5BKZ1 582 aaKnown RBP28.87■■■□□ 2.21
PCSK4-204ENST00000586074 DCCP43146 1447 aa28.86■■■□□ 2.21
PCSK4-204ENST00000586074 POTEAQ6S8J7 498 aa28.84■■■□□ 2.21
PCSK4-204ENST00000586074 CLTCL1P53675 1640 aa28.83■■■□□ 2.21
PCSK4-204ENST00000586074 NAIPQ13075 1403 aa28.82■■■□□ 2.2
PCSK4-204ENST00000586074 SPATA31A6Q5VVP1 1343 aa28.81■■■□□ 2.2
PCSK4-204ENST00000586074 NEXMIFQ5QGS0 1516 aa28.8■■■□□ 2.2
PCSK4-204ENST00000586074 SHPRHQ149N8 1683 aa28.78■■■□□ 2.2
PCSK4-204ENST00000586074 METP08581 1390 aa28.76■■■□□ 2.2
PCSK4-204ENST00000586074 LRP6O75581 1613 aa28.76■■■□□ 2.19
PCSK4-204ENST00000586074 BRINP3Q76B58 766 aa28.75■■■□□ 2.19
PCSK4-204ENST00000586074 KIF1BO60333 1816 aa28.75■■■□□ 2.19
PCSK4-204ENST00000586074 ASXL1Q8IXJ9 1541 aa28.74■■■□□ 2.19
PCSK4-204ENST00000586074 HFM1A2PYH4 1435 aa28.73■■■□□ 2.19
PCSK4-204ENST00000586074 MEX3CQ5U5Q3 659 aaKnown RBP28.73■■■□□ 2.19
PCSK4-204ENST00000586074 MST1RQ04912 1400 aa28.71■■■□□ 2.19
PCSK4-204ENST00000586074 ADGRL3Q9HAR2 1447 aa28.71■■■□□ 2.19
PCSK4-204ENST00000586074 TRIM52Q96A61 297 aa28.67■■■□□ 2.18
PCSK4-204ENST00000586074 NALCNQ8IZF0 1738 aa28.66■■■□□ 2.18
PCSK4-204ENST00000586074 NHSL1Q5SYE7 1610 aa28.66■■■□□ 2.18
PCSK4-204ENST00000586074 ZNF772Q68DY9 489 aaPredicted RBP28.66■■■□□ 2.18
PCSK4-204ENST00000586074 PTCH1Q13635 1447 aa28.65■■■□□ 2.18
PCSK4-204ENST00000586074 SETD5Q9C0A6 1442 aa28.65■■■□□ 2.18
PCSK4-204ENST00000586074 SETD1AO15047 1707 aaKnown RBP28.65■■■□□ 2.18
PCSK4-204ENST00000586074 VGFO15240 615 aaPredicted RBP28.63■■■□□ 2.17
PCSK4-204ENST00000586074 SLC4A1APQ9BWU0 796 aaKnown RBP28.61■■■□□ 2.17
PCSK4-204ENST00000586074 RPGRIP1LQ68CZ1 1315 aa28.6■■■□□ 2.17
PCSK4-204ENST00000586074 PRAG1Q86YV5 1406 aa28.6■■■□□ 2.17
PCSK4-204ENST00000586074 NUTM2BA6NNL0 878 aaPredicted RBP28.57■■■□□ 2.16
PCSK4-204ENST00000586074 NUTM2EB1AL46 878 aaPredicted RBP28.57■■■□□ 2.16
PCSK4-204ENST00000586074 NUTM2AQ8IVF1 878 aaPredicted RBP28.57■■■□□ 2.16
PCSK4-204ENST00000586074 LRRC59Q96AG4 307 aaKnown RBP28.57■■■□□ 2.16
PCSK4-204ENST00000586074 PPLO60437 1756 aa28.55■■■□□ 2.16
PCSK4-204ENST00000586074 C1orf167Q5SNV9 1468 aa28.54■■■□□ 2.16
PCSK4-204ENST00000586074 ROBO2Q9HCK4 1378 aa28.53■■■□□ 2.16
PCSK4-204ENST00000586074 PNPLA6Q8IY17 1366 aa28.51■■■□□ 2.16
PCSK4-204ENST00000586074 LAMC1P11047 1609 aa28.5■■■□□ 2.15
PCSK4-204ENST00000586074 AFF2P51816 1311 aa28.48■■■□□ 2.15
PCSK4-204ENST00000586074 CDK12Q9NYV4 1490 aaPredicted RBP28.48■■■□□ 2.15
PCSK4-204ENST00000586074 RXRBP28702 533 aa28.48■■■□□ 2.15
PCSK4-204ENST00000586074 DDX17Q92841 729 aaKnown RBP28.48■■■□□ 2.15
PCSK4-204ENST00000586074 CCDC144AA2RUR9 1427 aa28.48■■■□□ 2.15
PCSK4-204ENST00000586074 CDC42BPGQ6DT37 1551 aa28.43■■■□□ 2.14
PCSK4-204ENST00000586074 FOXD1Q16676 465 aa28.42■■■□□ 2.14
PCSK4-204ENST00000586074 C8orf37Q96NL8 207 aa28.42■■■□□ 2.14
PCSK4-204ENST00000586074 ORAI2Q96SN7 254 aa28.4■■■□□ 2.14
PCSK4-204ENST00000586074 SOS2Q07890 1332 aaPredicted RBP28.4■■■□□ 2.14
PCSK4-204ENST00000586074 ANKRD30BQ9BXX2 1392 aa28.39■■■□□ 2.14
PCSK4-204ENST00000586074 SPATA31E1Q6ZUB1 1445 aa28.39■■■□□ 2.14
PCSK4-204ENST00000586074 UPF1Q92900 1129 aaKnown RBP eCLIP28.37■■■□□ 2.13
PCSK4-204ENST00000586074 IFT172Q9UG01 1749 aa28.37■■■□□ 2.13
PCSK4-204ENST00000586074 ADGRF5Q8IZF2 1346 aa28.37■■■□□ 2.13
PCSK4-204ENST00000586074 TECPR2O15040 1411 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms