RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 SPHKAPQ2M3C7 1700 aa25.97■■□□□ 1.75
MBD3-204ENST00000585967 PPP1R15AO75807 674 aaPredicted RBP25.96■■□□□ 1.75
MBD3-204ENST00000585967 CHD2O14647 1828 aaKnown RBP25.95■■□□□ 1.74
MBD3-204ENST00000585967 MED1Q15648 1581 aaPredicted RBP25.95■■□□□ 1.74
MBD3-204ENST00000585967 NUP155O75694 1391 aa25.95■■□□□ 1.74
MBD3-204ENST00000585967 ZFYVE9O95405 1425 aa25.93■■□□□ 1.74
MBD3-204ENST00000585967 RIMS2Q9UQ26 1411 aa25.93■■□□□ 1.74
MBD3-204ENST00000585967 PLEKHG1Q9ULL1 1385 aa25.92■■□□□ 1.74
MBD3-204ENST00000585967 DIP2AQ14689 1571 aa25.91■■□□□ 1.74
MBD3-204ENST00000585967 KCNA6P17658 529 aa25.91■■□□□ 1.74
MBD3-204ENST00000585967 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.91■■□□□ 1.74
MBD3-204ENST00000585967 SLC26A8Q96RN1 970 aa25.89■■□□□ 1.74
MBD3-204ENST00000585967 RRBP1Q9P2E9 1410 aaKnown RBP25.88■■□□□ 1.73
MBD3-204ENST00000585967 CHGAP10645 457 aaKnown RBP25.88■■□□□ 1.73
MBD3-204ENST00000585967 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
MBD3-204ENST00000585967 TMEM94Q12767 1356 aa25.87■■□□□ 1.73
MBD3-204ENST00000585967 ILDR2Q71H61 639 aa25.86■■□□□ 1.73
MBD3-204ENST00000585967 SOCS7O14512 581 aa25.85■■□□□ 1.73
MBD3-204ENST00000585967 PROSER2Q86WR7 435 aaPredicted RBP25.84■■□□□ 1.73
MBD3-204ENST00000585967 KIF1BO60333 1816 aa25.84■■□□□ 1.73
MBD3-204ENST00000585967 MSH6P52701 1360 aa25.82■■□□□ 1.72
MBD3-204ENST00000585967 ROBO1Q9Y6N7 1651 aa25.82■■□□□ 1.72
MBD3-204ENST00000585967 TRPM2O94759 1503 aa25.8■■□□□ 1.72
MBD3-204ENST00000585967 PHF23Q9BUL5 403 aaPredicted RBP25.79■■□□□ 1.72
MBD3-204ENST00000585967 FAM135BQ49AJ0 1406 aa25.79■■□□□ 1.72
MBD3-204ENST00000585967 PIK3R4Q99570 1358 aa25.78■■□□□ 1.72
MBD3-204ENST00000585967 TBX22Q9Y458 520 aa25.77■■□□□ 1.72
MBD3-204ENST00000585967 SENP3Q9H4L4 574 aaPredicted RBP25.75■■□□□ 1.71
MBD3-204ENST00000585967 NCOA3Q9Y6Q9 1424 aa25.74■■□□□ 1.71
MBD3-204ENST00000585967 NAIPQ13075 1403 aa25.73■■□□□ 1.71
MBD3-204ENST00000585967 ADAMTS13Q76LX8 1427 aa25.71■■□□□ 1.71
MBD3-204ENST00000585967 CLTCL1P53675 1640 aa25.71■■□□□ 1.71
MBD3-204ENST00000585967 PHLPP1O60346 1717 aa25.71■■□□□ 1.71
MBD3-204ENST00000585967 HFM1A2PYH4 1435 aa25.71■■□□□ 1.71
MBD3-204ENST00000585967 SETBP1Q9Y6X0 1596 aa25.7■■□□□ 1.71
MBD3-204ENST00000585967 C14orf37Q86TY3 774 aa25.69■■□□□ 1.7
MBD3-204ENST00000585967 ZNF326Q5BKZ1 582 aaKnown RBP25.68■■□□□ 1.7
MBD3-204ENST00000585967 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.68■■□□□ 1.7
MBD3-204ENST00000585967 NUTM2DQ5VT03 806 aaPredicted RBP25.67■■□□□ 1.7
MBD3-204ENST00000585967 NRXN3Q9Y4C0 1643 aa25.66■■□□□ 1.7
MBD3-204ENST00000585967 XRN1Q8IZH2 1706 aaKnown RBP25.66■■□□□ 1.7
MBD3-204ENST00000585967 RBM33Q96EV2 1170 aaKnown RBP25.65■■□□□ 1.7
MBD3-204ENST00000585967 NEXMIFQ5QGS0 1516 aa25.63■■□□□ 1.69
MBD3-204ENST00000585967 TRIM52Q96A61 297 aa25.62■■□□□ 1.69
MBD3-204ENST00000585967 SLAIN2Q9P270 581 aa25.62■■□□□ 1.69
MBD3-204ENST00000585967 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
MBD3-204ENST00000585967 ATF3P18847 181 aa25.59■■□□□ 1.69
MBD3-204ENST00000585967 DCCP43146 1447 aa25.58■■□□□ 1.69
MBD3-204ENST00000585967 C19orf44Q9H6X5 657 aa25.58■■□□□ 1.69
MBD3-204ENST00000585967 AMOTL2Q9Y2J4 779 aa25.57■■□□□ 1.68
MBD3-204ENST00000585967 PPLO60437 1756 aa25.56■■□□□ 1.68
MBD3-204ENST00000585967 SLC4A1APQ9BWU0 796 aaKnown RBP25.55■■□□□ 1.68
MBD3-204ENST00000585967 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
MBD3-204ENST00000585967 AHDC1Q5TGY3 1603 aaPredicted RBP25.53■■□□□ 1.68
MBD3-204ENST00000585967 JCADQ9P266 1359 aa25.53■■□□□ 1.68
MBD3-204ENST00000585967 PTPRUQ92729 1446 aa25.52■■□□□ 1.68
MBD3-204ENST00000585967 ACIN1Q9UKV3 1341 aaKnown RBP25.51■■□□□ 1.67
MBD3-204ENST00000585967 SETD1AO15047 1707 aaKnown RBP25.5■■□□□ 1.67
MBD3-204ENST00000585967 VGFO15240 615 aaPredicted RBP25.5■■□□□ 1.67
MBD3-204ENST00000585967 SHPRHQ149N8 1683 aa25.5■■□□□ 1.67
MBD3-204ENST00000585967 RPGRIP1LQ68CZ1 1315 aa25.49■■□□□ 1.67
MBD3-204ENST00000585967 NALCNQ8IZF0 1738 aa25.49■■□□□ 1.67
MBD3-204ENST00000585967 CCDC144AA2RUR9 1427 aa25.45■■□□□ 1.66
MBD3-204ENST00000585967 ADGRL3Q9HAR2 1447 aa25.45■■□□□ 1.66
MBD3-204ENST00000585967 NHSL1Q5SYE7 1610 aa25.45■■□□□ 1.66
MBD3-204ENST00000585967 METP08581 1390 aa25.44■■□□□ 1.66
MBD3-204ENST00000585967 PTCH1Q13635 1447 aa25.43■■□□□ 1.66
MBD3-204ENST00000585967 IFT172Q9UG01 1749 aa25.42■■□□□ 1.66
MBD3-204ENST00000585967 ASXL1Q8IXJ9 1541 aa25.42■■□□□ 1.66
MBD3-204ENST00000585967 SPATA31A6Q5VVP1 1343 aa25.41■■□□□ 1.66
MBD3-204ENST00000585967 MST1RQ04912 1400 aa25.38■■□□□ 1.65
MBD3-204ENST00000585967 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
MBD3-204ENST00000585967 BRINP3Q76B58 766 aa25.36■■□□□ 1.65
MBD3-204ENST00000585967 MEX3CQ5U5Q3 659 aaKnown RBP25.34■■□□□ 1.65
MBD3-204ENST00000585967 RGS17Q9UGC6 210 aaPredicted RBP25.34■■□□□ 1.65
MBD3-204ENST00000585967 ANKRD30BQ9BXX2 1392 aa25.32■■□□□ 1.64
MBD3-204ENST00000585967 KNDC1Q76NI1 1749 aa25.32■■□□□ 1.64
MBD3-204ENST00000585967 MPHOSPH9Q99550 1183 aa25.31■■□□□ 1.64
MBD3-204ENST00000585967 SETD5Q9C0A6 1442 aa25.29■■□□□ 1.64
MBD3-204ENST00000585967 LAMC1P11047 1609 aa25.29■■□□□ 1.64
MBD3-204ENST00000585967 LRP6O75581 1613 aa25.28■■□□□ 1.64
MBD3-204ENST00000585967 FOXD1Q16676 465 aa25.28■■□□□ 1.64
MBD3-204ENST00000585967 SPATA31E1Q6ZUB1 1445 aa25.28■■□□□ 1.64
MBD3-204ENST00000585967 CDC42BPGQ6DT37 1551 aa25.27■■□□□ 1.64
MBD3-204ENST00000585967 LRRC59Q96AG4 307 aaKnown RBP25.26■■□□□ 1.63
MBD3-204ENST00000585967 ROBO2Q9HCK4 1378 aa25.26■■□□□ 1.63
MBD3-204ENST00000585967 ZNF772Q68DY9 489 aaPredicted RBP25.25■■□□□ 1.63
MBD3-204ENST00000585967 C1orf167Q5SNV9 1468 aa25.25■■□□□ 1.63
MBD3-204ENST00000585967 POTEAQ6S8J7 498 aa25.24■■□□□ 1.63
MBD3-204ENST00000585967 RGL3Q3MIN7 710 aa25.22■■□□□ 1.63
MBD3-204ENST00000585967 TECPR2O15040 1411 aa25.2■■□□□ 1.63
MBD3-204ENST00000585967 PIK3C2GO75747 1445 aa25.2■■□□□ 1.63
MBD3-204ENST00000585967 ADGRF5Q8IZF2 1346 aa25.17■■□□□ 1.62
MBD3-204ENST00000585967 NUTM2BA6NNL0 878 aaPredicted RBP25.17■■□□□ 1.62
MBD3-204ENST00000585967 NUTM2EB1AL46 878 aaPredicted RBP25.17■■□□□ 1.62
MBD3-204ENST00000585967 NUTM2AQ8IVF1 878 aaPredicted RBP25.17■■□□□ 1.62
MBD3-204ENST00000585967 MYOM2P54296 1465 aa25.16■■□□□ 1.62
MBD3-204ENST00000585967 LRPPRCP42704 1394 aaKnown RBP25.16■■□□□ 1.62
MBD3-204ENST00000585967 RAB3GAP2Q9H2M9 1393 aa25.16■■□□□ 1.62
MBD3-204ENST00000585967 PNPLA6Q8IY17 1366 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms