RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, human

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-206	ENST00000585856	PHF23	Q9BUL5	403 aa	Predicted RBP	40.92	■■■■■ 4.14
PTBP1-206	ENST00000585856	TMEM131L	A2VDJ0	1609 aa		40.92	■■■■■ 4.14
PTBP1-206	ENST00000585856	SENP3	Q9H4L4	574 aa	Predicted RBP	40.91	■■■■■ 4.14
PTBP1-206	ENST00000585856	ZFYVE9	O95405	1425 aa		40.9	■■■■■ 4.14
PTBP1-206	ENST00000585856		E9PCH4	1651 aa		40.89	■■■■■ 4.14
PTBP1-206	ENST00000585856	FAM135B	Q49AJ0	1406 aa		40.89	■■■■■ 4.14
PTBP1-206	ENST00000585856	HDGF	P51858	240 aa	Known RBP	40.88	■■■■■ 4.13
PTBP1-206	ENST00000585856	IQGAP3	Q86VI3	1631 aa		40.88	■■■■■ 4.13
PTBP1-206	ENST00000585856	PROSER2	Q86WR7	435 aa	Predicted RBP	40.86	■■■■■ 4.13
PTBP1-206	ENST00000585856	BCAN	Q96GW7	911 aa		40.86	■■■■■ 4.13
PTBP1-206	ENST00000585856	PLEKHG1	Q9ULL1	1385 aa		40.86	■■■■■ 4.13
PTBP1-206	ENST00000585856	CHD2	O14647	1828 aa	Known RBP	40.84	■■■■■ 4.13
PTBP1-206	ENST00000585856	RIMS2	Q9UQ26	1411 aa		40.84	■■■■■ 4.13
PTBP1-206	ENST00000585856	PPP1R15A	O75807	674 aa	Predicted RBP	40.8	■■■■■ 4.12
PTBP1-206	ENST00000585856	ROBO1	Q9Y6N7	1651 aa		40.79	■■■■■ 4.12
PTBP1-206	ENST00000585856	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	40.75	■■■■■ 4.11
PTBP1-206	ENST00000585856	MSH6	P52701	1360 aa		40.74	■■■■■ 4.11
PTBP1-206	ENST00000585856	RBM33	Q96EV2	1170 aa	Known RBP	40.71	■■■■■ 4.11
PTBP1-206	ENST00000585856	TBX22	Q9Y458	520 aa		40.7	■■■■■ 4.11
PTBP1-206	ENST00000585856	DIP2A	Q14689	1571 aa		40.69	■■■■■ 4.11
PTBP1-206	ENST00000585856	CHGA	P10645	457 aa	Known RBP	40.69	■■■■■ 4.1
PTBP1-206	ENST00000585856	NUP155	O75694	1391 aa		40.69	■■■■■ 4.1
PTBP1-206	ENST00000585856	NCOA3	Q9Y6Q9	1424 aa		40.64	■■■■■ 4.1
PTBP1-206	ENST00000585856	ITGAE	P38570	1179 aa		40.62	■■■■■ 4.09
PTBP1-206	ENST00000585856	ADAMTS13	Q76LX8	1427 aa		40.6	■■■■■ 4.09
PTBP1-206	ENST00000585856	PIK3R4	Q99570	1358 aa		40.6	■■■■■ 4.09
PTBP1-206	ENST00000585856	SPHKAP	Q2M3C7	1700 aa		40.59	■■■■■ 4.09
PTBP1-206	ENST00000585856	SLAIN2	Q9P270	581 aa		40.58	■■■■■ 4.09
PTBP1-206	ENST00000585856	PHLPP1	O60346	1717 aa		40.57	■■■■■ 4.09
PTBP1-206	ENST00000585856	TRPM2	O94759	1503 aa		40.54	■■■■■ 4.08
PTBP1-206	ENST00000585856	RGS17	Q9UGC6	210 aa	Predicted RBP	40.53	■■■■■ 4.08
PTBP1-206	ENST00000585856	NUTM2D	Q5VT03	806 aa	Predicted RBP	40.52	■■■■■ 4.08
PTBP1-206	ENST00000585856	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	40.49	■■■■■ 4.07
PTBP1-206	ENST00000585856	PPARGC1B	Q86YN6	1023 aa	Known RBP	40.48	■■■■■ 4.07
PTBP1-206	ENST00000585856	C14orf37	Q86TY3	774 aa		40.47	■■■■■ 4.07
PTBP1-206	ENST00000585856	CADPS2	Q86UW7	1296 aa		40.43	■■■■■ 4.06
PTBP1-206	ENST00000585856	C19orf44	Q9H6X5	657 aa		40.42	■■■■■ 4.06
PTBP1-206	ENST00000585856	JCAD	Q9P266	1359 aa		40.42	■■■■■ 4.06
PTBP1-206	ENST00000585856	SETBP1	Q9Y6X0	1596 aa		40.42	■■■■■ 4.06
PTBP1-206	ENST00000585856	COL16A1	Q07092	1604 aa	Predicted RBP	40.42	■■■■■ 4.06
PTBP1-206	ENST00000585856	NRXN3	Q9Y4C0	1643 aa		40.41	■■■■■ 4.06
PTBP1-206	ENST00000585856	RRBP1	Q9P2E9	1410 aa	Known RBP	40.4	■■■■■ 4.06
PTBP1-206	ENST00000585856	ATF3	P18847	181 aa		40.37	■■■■■ 4.05
PTBP1-206	ENST00000585856	AMOTL2	Q9Y2J4	779 aa		40.37	■■■■■ 4.05
PTBP1-206	ENST00000585856	XRN1	Q8IZH2	1706 aa	Known RBP	40.36	■■■■■ 4.05
PTBP1-206	ENST00000585856	PTPRU	Q92729	1446 aa		40.35	■■■■■ 4.05
PTBP1-206	ENST00000585856	AHDC1	Q5TGY3	1603 aa	Predicted RBP	40.34	■■■■■ 4.05
PTBP1-206	ENST00000585856	KIF1B	O60333	1816 aa		40.33	■■■■■ 4.05
PTBP1-206	ENST00000585856	CLTCL1	P53675	1640 aa		40.32	■■■■■ 4.05
PTBP1-206	ENST00000585856	ZNF326	Q5BKZ1	582 aa	Known RBP	40.32	■■■■■ 4.05
PTBP1-206	ENST00000585856	DCC	P43146	1447 aa		40.31	■■■■■ 4.04
PTBP1-206	ENST00000585856	NAIP	Q13075	1403 aa		40.3	■■■■■ 4.04
PTBP1-206	ENST00000585856	POTEA	Q6S8J7	498 aa		40.29	■■■■■ 4.04
PTBP1-206	ENST00000585856	NEXMIF	Q5QGS0	1516 aa		40.26	■■■■■ 4.04
PTBP1-206	ENST00000585856	SHPRH	Q149N8	1683 aa		40.25	■■■■■ 4.03
PTBP1-206	ENST00000585856	SPATA31A6	Q5VVP1	1343 aa		40.24	■■■■■ 4.03
PTBP1-206	ENST00000585856	MET	P08581	1390 aa		40.19	■■■■■ 4.02
PTBP1-206	ENST00000585856	BRINP3	Q76B58	766 aa		40.16	■■■■■ 4.02
PTBP1-206	ENST00000585856	HFM1	A2PYH4	1435 aa		40.16	■■■■■ 4.02
PTBP1-206	ENST00000585856	LRP6	O75581	1613 aa		40.14	■■■■■ 4.02
PTBP1-206	ENST00000585856	ASXL1	Q8IXJ9	1541 aa		40.13	■■■■■ 4.01
PTBP1-206	ENST00000585856	MST1R	Q04912	1400 aa		40.11	■■■■■ 4.01
PTBP1-206	ENST00000585856	NHSL1	Q5SYE7	1610 aa		40.11	■■■■■ 4.01
PTBP1-206	ENST00000585856	ADGRL3	Q9HAR2	1447 aa		40.1	■■■■■ 4.01
PTBP1-206	ENST00000585856	NALCN	Q8IZF0	1738 aa		40.09	■■■■■ 4.01
PTBP1-206	ENST00000585856	MEX3C	Q5U5Q3	659 aa	Known RBP	40.07	■■■■■ 4.01
PTBP1-206	ENST00000585856	TRIM52	Q96A61	297 aa		40.07	■■■■■ 4.01
PTBP1-206	ENST00000585856	SETD1A	O15047	1707 aa	Known RBP	40.06	■■■■■ 4
PTBP1-206	ENST00000585856	VGF	O15240	615 aa	Predicted RBP	40.05	■■■■■ 4
PTBP1-206	ENST00000585856	ZNF772	Q68DY9	489 aa	Predicted RBP	40.03	■■■■■ 4
PTBP1-206	ENST00000585856	SETD5	Q9C0A6	1442 aa		40.02	■■■■■ 4
PTBP1-206	ENST00000585856	RPGRIP1L	Q68CZ1	1315 aa		40.01	■■■■■ 4
PTBP1-206	ENST00000585856	PPL	O60437	1756 aa		40	■■■■□ 3.99
PTBP1-206	ENST00000585856	SLC4A1AP	Q9BWU0	796 aa	Known RBP	40	■■■■□ 3.99
PTBP1-206	ENST00000585856	PTCH1	Q13635	1447 aa		39.99	■■■■□ 3.99
PTBP1-206	ENST00000585856	PRAG1	Q86YV5	1406 aa		39.94	■■■■□ 3.98
PTBP1-206	ENST00000585856	LRRC59	Q96AG4	307 aa	Known RBP	39.93	■■■■□ 3.98
PTBP1-206	ENST00000585856	LAMC1	P11047	1609 aa		39.88	■■■■□ 3.97
PTBP1-206	ENST00000585856	NUTM2B	A6NNL0	878 aa	Predicted RBP	39.88	■■■■□ 3.97
PTBP1-206	ENST00000585856	NUTM2E	B1AL46	878 aa	Predicted RBP	39.88	■■■■□ 3.97
PTBP1-206	ENST00000585856	NUTM2A	Q8IVF1	878 aa	Predicted RBP	39.88	■■■■□ 3.97
PTBP1-206	ENST00000585856	C1orf167	Q5SNV9	1468 aa		39.88	■■■■□ 3.97
PTBP1-206	ENST00000585856	ROBO2	Q9HCK4	1378 aa		39.85	■■■■□ 3.97
PTBP1-206	ENST00000585856	PNPLA6	Q8IY17	1366 aa		39.81	■■■■□ 3.96
PTBP1-206	ENST00000585856	DDX17	Q92841	729 aa	Known RBP	39.79	■■■■□ 3.96
PTBP1-206	ENST00000585856	CCDC144A	A2RUR9	1427 aa		39.79	■■■■□ 3.96
PTBP1-206	ENST00000585856	RXRB	P28702	533 aa		39.78	■■■■□ 3.96
PTBP1-206	ENST00000585856	CDK12	Q9NYV4	1490 aa	Predicted RBP	39.77	■■■■□ 3.96
PTBP1-206	ENST00000585856	AFF2	P51816	1311 aa		39.76	■■■■□ 3.96
PTBP1-206	ENST00000585856	IFT172	Q9UG01	1749 aa		39.75	■■■■□ 3.95
PTBP1-206	ENST00000585856	FOXD1	Q16676	465 aa		39.73	■■■■□ 3.95
PTBP1-206	ENST00000585856	CDC42BPG	Q6DT37	1551 aa		39.72	■■■■□ 3.95
PTBP1-206	ENST00000585856	SOS2	Q07890	1332 aa	Predicted RBP	39.7	■■■■□ 3.95
PTBP1-206	ENST00000585856	SPATA31E1	Q6ZUB1	1445 aa		39.69	■■■■□ 3.94
PTBP1-206	ENST00000585856	ORAI2	Q96SN7	254 aa		39.69	■■■■□ 3.94
PTBP1-206	ENST00000585856	ANKRD30B	Q9BXX2	1392 aa		39.69	■■■■□ 3.94
PTBP1-206	ENST00000585856	C8orf37	Q96NL8	207 aa		39.67	■■■■□ 3.94
PTBP1-206	ENST00000585856	MPHOSPH9	Q99550	1183 aa		39.66	■■■■□ 3.94
PTBP1-206	ENST00000585856	ADGRF5	Q8IZF2	1346 aa		39.65	■■■■□ 3.94
PTBP1-206	ENST00000585856	ACIN1	Q9UKV3	1341 aa	Known RBP	39.65	■■■■□ 3.94

Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms