RNA–Protein interactions for RNA: ENST00000585854.1

CHAF1A-203, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 2

Gene CHAF1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-203ENST00000585854 RBM33Q96EV2 1170 aaKnown RBP31.37■■■□□ 2.61
CHAF1A-203ENST00000585854 UNC13BO14795 1591 aa31.34■■■□□ 2.61
CHAF1A-203ENST00000585854 CHGAP10645 457 aaKnown RBP31.34■■■□□ 2.61
CHAF1A-203ENST00000585854 PPP1R15AO75807 674 aaPredicted RBP31.33■■■□□ 2.61
CHAF1A-203ENST00000585854 ITGAEP38570 1179 aa31.32■■■□□ 2.6
CHAF1A-203ENST00000585854 E9PCH4 1651 aa31.3■■■□□ 2.6
CHAF1A-203ENST00000585854 TMEM131LA2VDJ0 1609 aa31.29■■■□□ 2.6
CHAF1A-203ENST00000585854 PPARGC1BQ86YN6 1023 aaKnown RBP31.29■■■□□ 2.6
CHAF1A-203ENST00000585854 RIMS2Q9UQ26 1411 aa31.29■■■□□ 2.6
CHAF1A-203ENST00000585854 NWD1Q149M9 1564 aa31.27■■■□□ 2.6
CHAF1A-203ENST00000585854 HDGFP51858 240 aaKnown RBP31.27■■■□□ 2.6
CHAF1A-203ENST00000585854 ZFYVE9O95405 1425 aa31.26■■■□□ 2.6
CHAF1A-203ENST00000585854 NKTRP30414 1462 aaKnown RBP31.26■■■□□ 2.59
CHAF1A-203ENST00000585854 ROCK1Q13464 1354 aa31.25■■■□□ 2.59
CHAF1A-203ENST00000585854 ROBO1Q9Y6N7 1651 aa31.25■■■□□ 2.59
CHAF1A-203ENST00000585854 FAM135BQ49AJ0 1406 aa31.24■■■□□ 2.59
CHAF1A-203ENST00000585854 PLEKHG1Q9ULL1 1385 aa31.24■■■□□ 2.59
CHAF1A-203ENST00000585854 CHD2O14647 1828 aaKnown RBP31.24■■■□□ 2.59
CHAF1A-203ENST00000585854 IQGAP3Q86VI3 1631 aa31.24■■■□□ 2.59
CHAF1A-203ENST00000585854 NUTM2DQ5VT03 806 aaPredicted RBP31.23■■■□□ 2.59
CHAF1A-203ENST00000585854 MSH6P52701 1360 aa31.21■■■□□ 2.59
CHAF1A-203ENST00000585854 NUP155O75694 1391 aa31.19■■■□□ 2.58
CHAF1A-203ENST00000585854 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.18■■■□□ 2.58
CHAF1A-203ENST00000585854 C14orf37Q86TY3 774 aa31.13■■■□□ 2.57
CHAF1A-203ENST00000585854 TBX22Q9Y458 520 aa31.13■■■□□ 2.57
CHAF1A-203ENST00000585854 SLAIN2Q9P270 581 aa31.1■■■□□ 2.57
CHAF1A-203ENST00000585854 PHLPP1O60346 1717 aa31.1■■■□□ 2.57
CHAF1A-203ENST00000585854 RGS17Q9UGC6 210 aaPredicted RBP31.08■■■□□ 2.57
CHAF1A-203ENST00000585854 ADAMTS13Q76LX8 1427 aa31.07■■■□□ 2.57
CHAF1A-203ENST00000585854 DIP2AQ14689 1571 aa31.06■■■□□ 2.56
CHAF1A-203ENST00000585854 SPHKAPQ2M3C7 1700 aa31.06■■■□□ 2.56
CHAF1A-203ENST00000585854 TRPM2O94759 1503 aa31.01■■■□□ 2.55
CHAF1A-203ENST00000585854 SIPA1L2Q9P2F8 1722 aaPredicted RBP31■■■□□ 2.55
CHAF1A-203ENST00000585854 ZNF326Q5BKZ1 582 aaKnown RBP30.99■■■□□ 2.55
CHAF1A-203ENST00000585854 PIK3R4Q99570 1358 aa30.98■■■□□ 2.55
CHAF1A-203ENST00000585854 NCOA3Q9Y6Q9 1424 aa30.98■■■□□ 2.55
CHAF1A-203ENST00000585854 ATF3P18847 181 aa30.96■■■□□ 2.55
CHAF1A-203ENST00000585854 AMOTL2Q9Y2J4 779 aa30.96■■■□□ 2.55
CHAF1A-203ENST00000585854 JCADQ9P266 1359 aa30.94■■■□□ 2.54
CHAF1A-203ENST00000585854 POTEAQ6S8J7 498 aa30.93■■■□□ 2.54
CHAF1A-203ENST00000585854 CADPS2Q86UW7 1296 aa30.93■■■□□ 2.54
CHAF1A-203ENST00000585854 C19orf44Q9H6X5 657 aa30.93■■■□□ 2.54
CHAF1A-203ENST00000585854 PTPRUQ92729 1446 aa30.92■■■□□ 2.54
CHAF1A-203ENST00000585854 COL16A1Q07092 1604 aaPredicted RBP30.92■■■□□ 2.54
CHAF1A-203ENST00000585854 NRXN3Q9Y4C0 1643 aa30.91■■■□□ 2.54
CHAF1A-203ENST00000585854 CLTCL1P53675 1640 aa30.88■■■□□ 2.53
CHAF1A-203ENST00000585854 KIF1BO60333 1816 aa30.87■■■□□ 2.53
CHAF1A-203ENST00000585854 SETBP1Q9Y6X0 1596 aa30.87■■■□□ 2.53
CHAF1A-203ENST00000585854 RRBP1Q9P2E9 1410 aaKnown RBP30.86■■■□□ 2.53
CHAF1A-203ENST00000585854 XRN1Q8IZH2 1706 aaKnown RBP30.85■■■□□ 2.53
CHAF1A-203ENST00000585854 NAIPQ13075 1403 aa30.83■■■□□ 2.53
CHAF1A-203ENST00000585854 AHDC1Q5TGY3 1603 aaPredicted RBP30.83■■■□□ 2.53
CHAF1A-203ENST00000585854 TRIM52Q96A61 297 aa30.82■■■□□ 2.52
CHAF1A-203ENST00000585854 MEX3CQ5U5Q3 659 aaKnown RBP30.81■■■□□ 2.52
CHAF1A-203ENST00000585854 NEXMIFQ5QGS0 1516 aa30.8■■■□□ 2.52
CHAF1A-203ENST00000585854 METP08581 1390 aa30.79■■■□□ 2.52
CHAF1A-203ENST00000585854 BRINP3Q76B58 766 aa30.78■■■□□ 2.52
CHAF1A-203ENST00000585854 SPATA31A6Q5VVP1 1343 aa30.77■■■□□ 2.52
CHAF1A-203ENST00000585854 SHPRHQ149N8 1683 aa30.77■■■□□ 2.52
CHAF1A-203ENST00000585854 LRP6O75581 1613 aa30.76■■■□□ 2.52
CHAF1A-203ENST00000585854 SETD1AO15047 1707 aaKnown RBP30.76■■■□□ 2.52
CHAF1A-203ENST00000585854 DCCP43146 1447 aa30.75■■■□□ 2.51
CHAF1A-203ENST00000585854 ASXL1Q8IXJ9 1541 aa30.72■■■□□ 2.51
CHAF1A-203ENST00000585854 NUTM2BA6NNL0 878 aaPredicted RBP30.71■■■□□ 2.51
CHAF1A-203ENST00000585854 NUTM2EB1AL46 878 aaPredicted RBP30.71■■■□□ 2.51
CHAF1A-203ENST00000585854 NUTM2AQ8IVF1 878 aaPredicted RBP30.71■■■□□ 2.51
CHAF1A-203ENST00000585854 MST1RQ04912 1400 aa30.71■■■□□ 2.51
CHAF1A-203ENST00000585854 NALCNQ8IZF0 1738 aa30.7■■■□□ 2.51
CHAF1A-203ENST00000585854 SLC4A1APQ9BWU0 796 aaKnown RBP30.68■■■□□ 2.5
CHAF1A-203ENST00000585854 HFM1A2PYH4 1435 aa30.67■■■□□ 2.5
CHAF1A-203ENST00000585854 ADGRL3Q9HAR2 1447 aa30.67■■■□□ 2.5
CHAF1A-203ENST00000585854 NHSL1Q5SYE7 1610 aa30.66■■■□□ 2.5
CHAF1A-203ENST00000585854 VGFO15240 615 aaPredicted RBP30.64■■■□□ 2.5
CHAF1A-203ENST00000585854 ZNF772Q68DY9 489 aaPredicted RBP30.64■■■□□ 2.5
CHAF1A-203ENST00000585854 DDX17Q92841 729 aaKnown RBP30.62■■■□□ 2.49
CHAF1A-203ENST00000585854 PPLO60437 1756 aa30.61■■■□□ 2.49
CHAF1A-203ENST00000585854 SETD5Q9C0A6 1442 aa30.58■■■□□ 2.49
CHAF1A-203ENST00000585854 RPGRIP1LQ68CZ1 1315 aa30.57■■■□□ 2.48
CHAF1A-203ENST00000585854 FOXD1Q16676 465 aa30.57■■■□□ 2.48
CHAF1A-203ENST00000585854 LRRC59Q96AG4 307 aaKnown RBP30.57■■■□□ 2.48
CHAF1A-203ENST00000585854 PTCH1Q13635 1447 aa30.55■■■□□ 2.48
CHAF1A-203ENST00000585854 ROBO2Q9HCK4 1378 aa30.54■■■□□ 2.48
CHAF1A-203ENST00000585854 C1orf167Q5SNV9 1468 aa30.53■■■□□ 2.48
CHAF1A-203ENST00000585854 AFF2P51816 1311 aa30.52■■■□□ 2.48
CHAF1A-203ENST00000585854 RXRBP28702 533 aa30.51■■■□□ 2.47
CHAF1A-203ENST00000585854 PNPLA6Q8IY17 1366 aa30.49■■■□□ 2.47
CHAF1A-203ENST00000585854 C8orf37Q96NL8 207 aa30.48■■■□□ 2.47
CHAF1A-203ENST00000585854 RGL3Q3MIN7 710 aa30.47■■■□□ 2.47
CHAF1A-203ENST00000585854 ORAI2Q96SN7 254 aa30.47■■■□□ 2.47
CHAF1A-203ENST00000585854 CCDC144AA2RUR9 1427 aa30.46■■■□□ 2.47
CHAF1A-203ENST00000585854 ADGRF5Q8IZF2 1346 aa30.43■■■□□ 2.46
CHAF1A-203ENST00000585854 ADAMTS2O95450 1211 aa30.42■■■□□ 2.46
CHAF1A-203ENST00000585854 STK26Q9P289 416 aa30.41■■■□□ 2.46
CHAF1A-203ENST00000585854 PRAG1Q86YV5 1406 aa30.4■■■□□ 2.46
CHAF1A-203ENST00000585854 MPHOSPH9Q99550 1183 aa30.4■■■□□ 2.46
CHAF1A-203ENST00000585854 LAMC1P11047 1609 aa30.4■■■□□ 2.46
CHAF1A-203ENST00000585854 UPF1Q92900 1129 aaKnown RBP eCLIP30.39■■■□□ 2.46
CHAF1A-203ENST00000585854 IFT172Q9UG01 1749 aa30.39■■■□□ 2.45
CHAF1A-203ENST00000585854 NGLY1Q96IV0 654 aa30.37■■■□□ 2.45
CHAF1A-203ENST00000585854 QTRT2Q9H974 415 aaKnown RBP30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms