RNA–Protein interactions for RNA: ENST00000585535.2

PTBP1-205, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-205ENST00000585535 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
PTBP1-205ENST00000585535 MYO5BQ9ULV0 1848 aa17.21■□□□□ 0.35
PTBP1-205ENST00000585535 TBX22Q9Y458 520 aa17.21■□□□□ 0.35
PTBP1-205ENST00000585535 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
PTBP1-205ENST00000585535 CHGAP10645 457 aaKnown RBP17.19■□□□□ 0.34
PTBP1-205ENST00000585535 TRIM52Q96A61 297 aa17.18■□□□□ 0.34
PTBP1-205ENST00000585535 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
PTBP1-205ENST00000585535 SPHKAPQ2M3C7 1700 aa17.17■□□□□ 0.34
PTBP1-205ENST00000585535 SLC4A1APQ9BWU0 796 aaKnown RBP17.16■□□□□ 0.34
PTBP1-205ENST00000585535 ALKQ9UM73 1620 aa17.15■□□□□ 0.34
PTBP1-205ENST00000585535 BCANQ96GW7 911 aa17.15■□□□□ 0.34
PTBP1-205ENST00000585535 TRPM2O94759 1503 aa17.14■□□□□ 0.33
PTBP1-205ENST00000585535 PIK3R4Q99570 1358 aa17.14■□□□□ 0.33
PTBP1-205ENST00000585535 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
PTBP1-205ENST00000585535 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
PTBP1-205ENST00000585535 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
PTBP1-205ENST00000585535 NKTRP30414 1462 aaKnown RBP17.12■□□□□ 0.33
PTBP1-205ENST00000585535 NWD1Q149M9 1564 aa17.12■□□□□ 0.33
PTBP1-205ENST00000585535 TMEM94Q12767 1356 aa17.12■□□□□ 0.33
PTBP1-205ENST00000585535 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
PTBP1-205ENST00000585535 CHD2O14647 1828 aaKnown RBP17.11■□□□□ 0.33
PTBP1-205ENST00000585535 HSPA1LP34931 641 aa17.1■□□□□ 0.33
PTBP1-205ENST00000585535 NUTM2DQ5VT03 806 aaPredicted RBP17.1■□□□□ 0.33
PTBP1-205ENST00000585535 ZNF326Q5BKZ1 582 aaKnown RBP17.09■□□□□ 0.33
PTBP1-205ENST00000585535 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
PTBP1-205ENST00000585535 NCOA3Q9Y6Q9 1424 aa17.09■□□□□ 0.33
PTBP1-205ENST00000585535 DIP2AQ14689 1571 aa17.09■□□□□ 0.33
PTBP1-205ENST00000585535 CLTCL1P53675 1640 aa17.09■□□□□ 0.33
PTBP1-205ENST00000585535 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
PTBP1-205ENST00000585535 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
PTBP1-205ENST00000585535 SETD5Q9C0A6 1442 aa17.07■□□□□ 0.32
PTBP1-205ENST00000585535 FAM135BQ49AJ0 1406 aa17.06■□□□□ 0.32
PTBP1-205ENST00000585535 KIF1BO60333 1816 aa17.06■□□□□ 0.32
PTBP1-205ENST00000585535 SETBP1Q9Y6X0 1596 aa17.06■□□□□ 0.32
PTBP1-205ENST00000585535 VGFO15240 615 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-205ENST00000585535 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-205ENST00000585535 HRCP23327 699 aa17.04■□□□□ 0.32
PTBP1-205ENST00000585535 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
PTBP1-205ENST00000585535 NEXMIFQ5QGS0 1516 aa17.04■□□□□ 0.32
PTBP1-205ENST00000585535 RBM33Q96EV2 1170 aaKnown RBP17.03■□□□□ 0.32
PTBP1-205ENST00000585535 FOXD1Q16676 465 aa17.02■□□□□ 0.32
PTBP1-205ENST00000585535 NRXN3Q9Y4C0 1643 aa17.02■□□□□ 0.31
PTBP1-205ENST00000585535 PTPRUQ92729 1446 aa17.02■□□□□ 0.31
PTBP1-205ENST00000585535 MSH6P52701 1360 aa17.02■□□□□ 0.31
PTBP1-205ENST00000585535 C19orf44Q9H6X5 657 aa17.01■□□□□ 0.31
PTBP1-205ENST00000585535 SLAIN2Q9P270 581 aa17.01■□□□□ 0.31
PTBP1-205ENST00000585535 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
PTBP1-205ENST00000585535 METP08581 1390 aa16.99■□□□□ 0.31
PTBP1-205ENST00000585535 RAB3GAP2Q9H2M9 1393 aa16.99■□□□□ 0.31
PTBP1-205ENST00000585535 CCDC144AA2RUR9 1427 aa16.98■□□□□ 0.31
PTBP1-205ENST00000585535 SPATA31E1Q6ZUB1 1445 aa16.97■□□□□ 0.31
PTBP1-205ENST00000585535 CADPS2Q86UW7 1296 aa16.96■□□□□ 0.31
PTBP1-205ENST00000585535 XRN1Q8IZH2 1706 aaKnown RBP16.96■□□□□ 0.3
PTBP1-205ENST00000585535 ANKRD30BQ9BXX2 1392 aa16.94■□□□□ 0.3
PTBP1-205ENST00000585535 PPLO60437 1756 aa16.93■□□□□ 0.3
PTBP1-205ENST00000585535 ATF3P18847 181 aa16.93■□□□□ 0.3
PTBP1-205ENST00000585535 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
PTBP1-205ENST00000585535 DCCP43146 1447 aa16.92■□□□□ 0.3
PTBP1-205ENST00000585535 PRAG1Q86YV5 1406 aa16.92■□□□□ 0.3
PTBP1-205ENST00000585535 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-205ENST00000585535 RGL3Q3MIN7 710 aa16.91■□□□□ 0.3
PTBP1-205ENST00000585535 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
PTBP1-205ENST00000585535 ADGRF5Q8IZF2 1346 aa16.9■□□□□ 0.3
PTBP1-205ENST00000585535 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
PTBP1-205ENST00000585535 SETD1AO15047 1707 aaKnown RBP16.89■□□□□ 0.29
PTBP1-205ENST00000585535 PTCH1Q13635 1447 aa16.87■□□□□ 0.29
PTBP1-205ENST00000585535 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
PTBP1-205ENST00000585535 MED1Q15648 1581 aaPredicted RBP16.86■□□□□ 0.29
PTBP1-205ENST00000585535 ROBO2Q9HCK4 1378 aa16.85■□□□□ 0.29
PTBP1-205ENST00000585535 IFT172Q9UG01 1749 aa16.84■□□□□ 0.29
PTBP1-205ENST00000585535 STAC3Q96MF2 364 aa16.84■□□□□ 0.29
PTBP1-205ENST00000585535 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
PTBP1-205ENST00000585535 BRINP3Q76B58 766 aa16.83■□□□□ 0.28
PTBP1-205ENST00000585535 ABCC11Q96J66 1382 aa16.83■□□□□ 0.28
PTBP1-205ENST00000585535 C14orf93Q9H972 538 aaKnown RBP16.83■□□□□ 0.28
PTBP1-205ENST00000585535 NRXN1Q9ULB1 1477 aa16.82■□□□□ 0.28
PTBP1-205ENST00000585535 TECPR2O15040 1411 aa16.82■□□□□ 0.28
PTBP1-205ENST00000585535 MST1RQ04912 1400 aa16.82■□□□□ 0.28
PTBP1-205ENST00000585535 SIRT1Q96EB6 747 aa16.82■□□□□ 0.28
PTBP1-205ENST00000585535 LRPPRCP42704 1394 aaKnown RBP16.81■□□□□ 0.28
PTBP1-205ENST00000585535 JCADQ9P266 1359 aa16.81■□□□□ 0.28
PTBP1-205ENST00000585535 AHDC1Q5TGY3 1603 aaPredicted RBP16.8■□□□□ 0.28
PTBP1-205ENST00000585535 MYOM2P54296 1465 aa16.8■□□□□ 0.28
PTBP1-205ENST00000585535 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
PTBP1-205ENST00000585535 SOCS7O14512 581 aa16.79■□□□□ 0.28
PTBP1-205ENST00000585535 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
PTBP1-205ENST00000585535 NALCNQ8IZF0 1738 aa16.78■□□□□ 0.28
PTBP1-205ENST00000585535 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-205ENST00000585535 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
PTBP1-205ENST00000585535 RGS17Q9UGC6 210 aaPredicted RBP16.76■□□□□ 0.27
PTBP1-205ENST00000585535 ASXL1Q8IXJ9 1541 aa16.75■□□□□ 0.27
PTBP1-205ENST00000585535 C1orf167Q5SNV9 1468 aa16.75■□□□□ 0.27
PTBP1-205ENST00000585535 CFAP70Q5T0N1 1121 aa16.75■□□□□ 0.27
PTBP1-205ENST00000585535 STK26Q9P289 416 aa16.75■□□□□ 0.27
PTBP1-205ENST00000585535 YTHDC2Q9H6S0 1430 aaKnown RBP16.75■□□□□ 0.27
PTBP1-205ENST00000585535 SPATA31A6Q5VVP1 1343 aa16.74■□□□□ 0.27
PTBP1-205ENST00000585535 DHX57Q6P158 1386 aaKnown RBP16.74■□□□□ 0.27
PTBP1-205ENST00000585535 WAPLQ7Z5K2 1190 aa16.73■□□□□ 0.27
PTBP1-205ENST00000585535 LRRC59Q96AG4 307 aaKnown RBP16.73■□□□□ 0.27
PTBP1-205ENST00000585535 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms