RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 PIP4K2BP78356 416 aa26.91■■□□□ 1.9
SRSF1-209ENST00000585096 ZFYVE9O95405 1425 aa26.9■■□□□ 1.9
SRSF1-209ENST00000585096 KCNA6P17658 529 aa26.89■■□□□ 1.9
SRSF1-209ENST00000585096 TMEM131LA2VDJ0 1609 aa26.89■■□□□ 1.9
SRSF1-209ENST00000585096 PLEKHG1Q9ULL1 1385 aa26.88■■□□□ 1.89
SRSF1-209ENST00000585096 TRIM52Q96A61 297 aa26.88■■□□□ 1.89
SRSF1-209ENST00000585096 STRCP1A6NGW2 1772 aa26.85■■□□□ 1.89
SRSF1-209ENST00000585096 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.89
SRSF1-209ENST00000585096 NUTM2DQ5VT03 806 aaPredicted RBP26.81■■□□□ 1.88
SRSF1-209ENST00000585096 TBX22Q9Y458 520 aa26.81■■□□□ 1.88
SRSF1-209ENST00000585096 PROSER2Q86WR7 435 aaPredicted RBP26.8■■□□□ 1.88
SRSF1-209ENST00000585096 SLC4A1APQ9BWU0 796 aaKnown RBP26.79■■□□□ 1.88
SRSF1-209ENST00000585096 HSPA1LP34931 641 aa26.78■■□□□ 1.88
SRSF1-209ENST00000585096 ZNF326Q5BKZ1 582 aaKnown RBP26.78■■□□□ 1.88
SRSF1-209ENST00000585096 TMEM94Q12767 1356 aa26.78■■□□□ 1.88
SRSF1-209ENST00000585096 SPHKAPQ2M3C7 1700 aa26.75■■□□□ 1.87
SRSF1-209ENST00000585096 NKTRP30414 1462 aaKnown RBP26.74■■□□□ 1.87
SRSF1-209ENST00000585096 MYO5BQ9ULV0 1848 aa26.74■■□□□ 1.87
SRSF1-209ENST00000585096 DISP3Q9P2K9 1392 aa26.74■■□□□ 1.87
SRSF1-209ENST00000585096 ALKQ9UM73 1620 aa26.73■■□□□ 1.87
SRSF1-209ENST00000585096 TRPM2O94759 1503 aa26.73■■□□□ 1.87
SRSF1-209ENST00000585096 ADAMTS13Q76LX8 1427 aa26.72■■□□□ 1.87
SRSF1-209ENST00000585096 NWD1Q149M9 1564 aa26.71■■□□□ 1.87
SRSF1-209ENST00000585096 RBM33Q96EV2 1170 aaKnown RBP26.7■■□□□ 1.86
SRSF1-209ENST00000585096 PIK3R4Q99570 1358 aa26.7■■□□□ 1.86
SRSF1-209ENST00000585096 ACIN1Q9UKV3 1341 aaKnown RBP26.68■■□□□ 1.86
SRSF1-209ENST00000585096 DIP2AQ14689 1571 aa26.67■■□□□ 1.86
SRSF1-209ENST00000585096 CLTCL1P53675 1640 aa26.65■■□□□ 1.86
SRSF1-209ENST00000585096 MSH6P52701 1360 aa26.65■■□□□ 1.86
SRSF1-209ENST00000585096 MPHOSPH9Q99550 1183 aa26.63■■□□□ 1.85
SRSF1-209ENST00000585096 XIRP1Q702N8 1843 aaKnown RBP26.61■■□□□ 1.85
SRSF1-209ENST00000585096 AMOTL2Q9Y2J4 779 aa26.61■■□□□ 1.85
SRSF1-209ENST00000585096 NCOA3Q9Y6Q9 1424 aa26.61■■□□□ 1.85
SRSF1-209ENST00000585096 FAM135BQ49AJ0 1406 aa26.6■■□□□ 1.85
SRSF1-209ENST00000585096 FOXD1Q16676 465 aa26.6■■□□□ 1.85
SRSF1-209ENST00000585096 C14orf37Q86TY3 774 aa26.6■■□□□ 1.85
SRSF1-209ENST00000585096 RPGRIP1LQ68CZ1 1315 aa26.6■■□□□ 1.85
SRSF1-209ENST00000585096 SETD5Q9C0A6 1442 aa26.59■■□□□ 1.85
SRSF1-209ENST00000585096 VGFO15240 615 aaPredicted RBP26.59■■□□□ 1.85
SRSF1-209ENST00000585096 CHD2O14647 1828 aaKnown RBP26.59■■□□□ 1.85
SRSF1-209ENST00000585096 SETBP1Q9Y6X0 1596 aa26.58■■□□□ 1.85
SRSF1-209ENST00000585096 NEXMIFQ5QGS0 1516 aa26.57■■□□□ 1.84
SRSF1-209ENST00000585096 SLAIN2Q9P270 581 aa26.55■■□□□ 1.84
SRSF1-209ENST00000585096 CCDC144AA2RUR9 1427 aa26.54■■□□□ 1.84
SRSF1-209ENST00000585096 PTPRUQ92729 1446 aa26.54■■□□□ 1.84
SRSF1-209ENST00000585096 C19orf44Q9H6X5 657 aa26.53■■□□□ 1.84
SRSF1-209ENST00000585096 KIF1BO60333 1816 aa26.53■■□□□ 1.84
SRSF1-209ENST00000585096 METP08581 1390 aa26.52■■□□□ 1.84
SRSF1-209ENST00000585096 NRXN3Q9Y4C0 1643 aa26.51■■□□□ 1.83
SRSF1-209ENST00000585096 CADPS2Q86UW7 1296 aa26.51■■□□□ 1.83
SRSF1-209ENST00000585096 ATF3P18847 181 aa26.5■■□□□ 1.83
SRSF1-209ENST00000585096 RAB3GAP2Q9H2M9 1393 aa26.48■■□□□ 1.83
SRSF1-209ENST00000585096 ILDR2Q71H61 639 aa26.48■■□□□ 1.83
SRSF1-209ENST00000585096 RGL3Q3MIN7 710 aa26.45■■□□□ 1.82
SRSF1-209ENST00000585096 MED1Q15648 1581 aaPredicted RBP26.44■■□□□ 1.82
SRSF1-209ENST00000585096 ROBO1Q9Y6N7 1651 aa26.43■■□□□ 1.82
SRSF1-209ENST00000585096 SPATA31E1Q6ZUB1 1445 aa26.41■■□□□ 1.82
SRSF1-209ENST00000585096 XRN1Q8IZH2 1706 aaKnown RBP26.41■■□□□ 1.82
SRSF1-209ENST00000585096 PHF23Q9BUL5 403 aaPredicted RBP26.4■■□□□ 1.82
SRSF1-209ENST00000585096 ANKRD30BQ9BXX2 1392 aa26.4■■□□□ 1.82
SRSF1-209ENST00000585096 DCCP43146 1447 aa26.39■■□□□ 1.81
SRSF1-209ENST00000585096 HRCP23327 699 aa26.38■■□□□ 1.81
SRSF1-209ENST00000585096 ADGRF5Q8IZF2 1346 aa26.37■■□□□ 1.81
SRSF1-209ENST00000585096 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.36■■□□□ 1.81
SRSF1-209ENST00000585096 PTCH1Q13635 1447 aa26.34■■□□□ 1.81
SRSF1-209ENST00000585096 PPLO60437 1756 aa26.33■■□□□ 1.81
SRSF1-209ENST00000585096 ADGRL3Q9HAR2 1447 aa26.33■■□□□ 1.81
SRSF1-209ENST00000585096 SOCS7O14512 581 aa26.31■■□□□ 1.8
SRSF1-209ENST00000585096 ROBO2Q9HCK4 1378 aa26.31■■□□□ 1.8
SRSF1-209ENST00000585096 BRINP3Q76B58 766 aa26.3■■□□□ 1.8
SRSF1-209ENST00000585096 PRAG1Q86YV5 1406 aa26.3■■□□□ 1.8
SRSF1-209ENST00000585096 JCADQ9P266 1359 aa26.29■■□□□ 1.8
SRSF1-209ENST00000585096 MST1RQ04912 1400 aa26.28■■□□□ 1.8
SRSF1-209ENST00000585096 SETD1AO15047 1707 aaKnown RBP26.27■■□□□ 1.8
SRSF1-209ENST00000585096 PHLPP1O60346 1717 aa26.25■■□□□ 1.79
SRSF1-209ENST00000585096 PIK3C2GO75747 1445 aa26.25■■□□□ 1.79
SRSF1-209ENST00000585096 STK26Q9P289 416 aa26.23■■□□□ 1.79
SRSF1-209ENST00000585096 LRPPRCP42704 1394 aaKnown RBP26.22■■□□□ 1.79
SRSF1-209ENST00000585096 AHDC1Q5TGY3 1603 aaPredicted RBP26.22■■□□□ 1.79
SRSF1-209ENST00000585096 TMEM132EQ6IEE7 984 aa26.21■■□□□ 1.79
SRSF1-209ENST00000585096 C14orf93Q9H972 538 aaKnown RBP26.21■■□□□ 1.79
SRSF1-209ENST00000585096 ASXL1Q8IXJ9 1541 aa26.2■■□□□ 1.79
SRSF1-209ENST00000585096 COL16A1Q07092 1604 aaPredicted RBP26.2■■□□□ 1.78
SRSF1-209ENST00000585096 ABCC11Q96J66 1382 aa26.2■■□□□ 1.78
SRSF1-209ENST00000585096 IFT172Q9UG01 1749 aa26.19■■□□□ 1.78
SRSF1-209ENST00000585096 SPATA31A6Q5VVP1 1343 aa26.18■■□□□ 1.78
SRSF1-209ENST00000585096 MYOM2P54296 1465 aa26.18■■□□□ 1.78
SRSF1-209ENST00000585096 TECPR2O15040 1411 aa26.18■■□□□ 1.78
SRSF1-209ENST00000585096 NALCNQ8IZF0 1738 aa26.18■■□□□ 1.78
SRSF1-209ENST00000585096 C1orf167Q5SNV9 1468 aa26.17■■□□□ 1.78
SRSF1-209ENST00000585096 NRXN1Q9ULB1 1477 aa26.17■■□□□ 1.78
SRSF1-209ENST00000585096 RGS17Q9UGC6 210 aaPredicted RBP26.16■■□□□ 1.78
SRSF1-209ENST00000585096 CFAP70Q5T0N1 1121 aa26.15■■□□□ 1.78
SRSF1-209ENST00000585096 WAPLQ7Z5K2 1190 aa26.15■■□□□ 1.78
SRSF1-209ENST00000585096 YTHDC2Q9H6S0 1430 aaKnown RBP26.14■■□□□ 1.78
SRSF1-209ENST00000585096 LRRC59Q96AG4 307 aaKnown RBP26.14■■□□□ 1.78
SRSF1-209ENST00000585096 DHX57Q6P158 1386 aaKnown RBP26.13■■□□□ 1.77
SRSF1-209ENST00000585096 SIRT1Q96EB6 747 aa26.13■■□□□ 1.77
SRSF1-209ENST00000585096 STAC3Q96MF2 364 aa26.13■■□□□ 1.77
SRSF1-209ENST00000585096 DCAF11Q8TEB1 546 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms