RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 TRIM29Q14134 588 aa16.23■□□□□ 0.19
RAB11FIP4-210ENST00000585058 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
RAB11FIP4-210ENST00000585058 EIF2S2P20042 333 aaKnown RBP16.22■□□□□ 0.19
RAB11FIP4-210ENST00000585058 CPLX2Q6PUV4 134 aaKnown RBP16.22■□□□□ 0.19
RAB11FIP4-210ENST00000585058 COG3Q96JB2 828 aa16.22■□□□□ 0.19
RAB11FIP4-210ENST00000585058 FBXO3Q9UK99 471 aa16.22■□□□□ 0.19
RAB11FIP4-210ENST00000585058 ZKSCAN1P17029 563 aaPredicted RBP16.21■□□□□ 0.19
RAB11FIP4-210ENST00000585058 TEFQ10587 303 aa16.21■□□□□ 0.19
RAB11FIP4-210ENST00000585058 RUFY2Q8WXA3 655 aa16.21■□□□□ 0.19
RAB11FIP4-210ENST00000585058 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.19
RAB11FIP4-210ENST00000585058 IPO7O95373 1038 aaKnown RBP16.21■□□□□ 0.19
RAB11FIP4-210ENST00000585058 TCEAL9Q9UHQ7 104 aa16.21■□□□□ 0.19
RAB11FIP4-210ENST00000585058 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.18
RAB11FIP4-210ENST00000585058 REC8O95072 547 aa16.2■□□□□ 0.18
RAB11FIP4-210ENST00000585058 APPP05067 770 aa16.2■□□□□ 0.18
RAB11FIP4-210ENST00000585058 NECTIN2Q92692 538 aa16.2■□□□□ 0.18
RAB11FIP4-210ENST00000585058 NEXNQ0ZGT2 675 aa16.2■□□□□ 0.18
RAB11FIP4-210ENST00000585058 BICD2Q8TD16 824 aa16.2■□□□□ 0.18
RAB11FIP4-210ENST00000585058 CPLX1O14810 134 aa16.2■□□□□ 0.18
RAB11FIP4-210ENST00000585058 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
RAB11FIP4-210ENST00000585058 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
RAB11FIP4-210ENST00000585058 LRRFIP1Q32MZ4 808 aaKnown RBP16.19■□□□□ 0.18
RAB11FIP4-210ENST00000585058 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
RAB11FIP4-210ENST00000585058 AMOTL1Q8IY63 956 aa16.18■□□□□ 0.18
RAB11FIP4-210ENST00000585058 FBXW7Q969H0 707 aa16.18■□□□□ 0.18
RAB11FIP4-210ENST00000585058 APAF1O14727 1248 aa16.18■□□□□ 0.18
RAB11FIP4-210ENST00000585058 TTC5Q8N0Z6 440 aa16.18■□□□□ 0.18
RAB11FIP4-210ENST00000585058 ANKRD20A12PQ8NF67 263 aa16.18■□□□□ 0.18
RAB11FIP4-210ENST00000585058 NOL10Q9BSC4 688 aaKnown RBP16.18■□□□□ 0.18
RAB11FIP4-210ENST00000585058 DHX16O60231 1041 aaKnown RBP16.17■□□□□ 0.18
RAB11FIP4-210ENST00000585058 TRIM34Q9BYJ4 488 aa16.17■□□□□ 0.18
RAB11FIP4-210ENST00000585058 FAM13BQ9NYF5 915 aa16.17■□□□□ 0.18
RAB11FIP4-210ENST00000585058 CCDC47Q96A33 483 aaKnown RBP16.17■□□□□ 0.18
RAB11FIP4-210ENST00000585058 DDX19BQ9UMR2 479 aa16.16■□□□□ 0.18
RAB11FIP4-210ENST00000585058 VPS37CA5D8V6 355 aaPredicted RBP16.16■□□□□ 0.18
RAB11FIP4-210ENST00000585058 MSH5O43196 834 aa16.16■□□□□ 0.18
RAB11FIP4-210ENST00000585058 EVA1CP58658 441 aa16.16■□□□□ 0.18
RAB11FIP4-210ENST00000585058 CCDC144AA2RUR9 1427 aa16.16■□□□□ 0.18
RAB11FIP4-210ENST00000585058 PRKRIP1Q9H875 184 aaPredicted RBP16.16■□□□□ 0.18
RAB11FIP4-210ENST00000585058 CTDP1Q9Y5B0 961 aaPredicted RBP16.15■□□□□ 0.18
RAB11FIP4-210ENST00000585058 FOSBP53539 338 aa16.15■□□□□ 0.18
RAB11FIP4-210ENST00000585058 ZBED9Q6R2W3 1325 aa16.14■□□□□ 0.18
RAB11FIP4-210ENST00000585058 EVC2Q86UK5 1308 aa16.14■□□□□ 0.17
RAB11FIP4-210ENST00000585058 NFXL1Q6ZNB6 911 aa16.14■□□□□ 0.17
RAB11FIP4-210ENST00000585058 CHMP5Q9NZZ3 219 aa16.14■□□□□ 0.17
RAB11FIP4-210ENST00000585058 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.17
RAB11FIP4-210ENST00000585058 TRDNQ13061 729 aa16.13■□□□□ 0.17
RAB11FIP4-210ENST00000585058 HOOK1Q9UJC3 728 aaKnown RBP16.13■□□□□ 0.17
RAB11FIP4-210ENST00000585058 MINK1Q8N4C8 1332 aaPredicted RBP16.13■□□□□ 0.17
RAB11FIP4-210ENST00000585058 FHOD3Q2V2M9 1422 aa16.13■□□□□ 0.17
RAB11FIP4-210ENST00000585058 RSPH4AQ5TD94 716 aa16.13■□□□□ 0.17
RAB11FIP4-210ENST00000585058 DZIP1LQ8IYY4 767 aaKnown RBP16.13■□□□□ 0.17
RAB11FIP4-210ENST00000585058 TEX35Q5T0J7 233 aa16.13■□□□□ 0.17
RAB11FIP4-210ENST00000585058 RNF20Q5VTR2 975 aa16.13■□□□□ 0.17
RAB11FIP4-210ENST00000585058 VPS37DQ86XT2 251 aa16.13■□□□□ 0.17
RAB11FIP4-210ENST00000585058 SMC3Q9UQE7 1217 aa16.12■□□□□ 0.17
RAB11FIP4-210ENST00000585058 SASS6Q6UVJ0 657 aa16.12■□□□□ 0.17
RAB11FIP4-210ENST00000585058 RIPK4P57078 832 aa16.11■□□□□ 0.17
RAB11FIP4-210ENST00000585058 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
RAB11FIP4-210ENST00000585058 FKBP5Q13451 457 aaPredicted RBP16.11■□□□□ 0.17
RAB11FIP4-210ENST00000585058 G3BP1Q13283 466 aaKnown RBP eCLIP16.11■□□□□ 0.17
RAB11FIP4-210ENST00000585058 API5Q9BZZ5 524 aaKnown RBP16.11■□□□□ 0.17
RAB11FIP4-210ENST00000585058 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
RAB11FIP4-210ENST00000585058 DIAPH1O60610 1272 aaKnown RBP16.11■□□□□ 0.17
RAB11FIP4-210ENST00000585058 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
RAB11FIP4-210ENST00000585058 BCL11BQ9C0K0 894 aaPredicted RBP16.1■□□□□ 0.17
RAB11FIP4-210ENST00000585058 NAP1L1P55209 391 aaKnown RBP16.09■□□□□ 0.17
RAB11FIP4-210ENST00000585058 IFT57Q9NWB7 429 aa16.09■□□□□ 0.17
RAB11FIP4-210ENST00000585058 USP47Q96K76 1375 aa16.09■□□□□ 0.17
RAB11FIP4-210ENST00000585058 ERICH2A1L162 156 aa16.09■□□□□ 0.17
RAB11FIP4-210ENST00000585058 SYTL4Q96C24 671 aaPredicted RBP16.09■□□□□ 0.17
RAB11FIP4-210ENST00000585058 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
RAB11FIP4-210ENST00000585058 DDX58O95786 925 aaKnown RBP16.08■□□□□ 0.17
RAB11FIP4-210ENST00000585058 UACAQ9BZF9 1416 aa16.08■□□□□ 0.16
RAB11FIP4-210ENST00000585058 VGFO15240 615 aaPredicted RBP16.08■□□□□ 0.16
RAB11FIP4-210ENST00000585058 RUFY1Q96T51 708 aa16.08■□□□□ 0.16
RAB11FIP4-210ENST00000585058 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.07■□□□□ 0.16
RAB11FIP4-210ENST00000585058 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
RAB11FIP4-210ENST00000585058 LNPKQ9C0E8 428 aa16.07■□□□□ 0.16
RAB11FIP4-210ENST00000585058 MNS1Q8NEH6 495 aa16.07■□□□□ 0.16
RAB11FIP4-210ENST00000585058 FAM43AQ8N2R8 423 aa16.07■□□□□ 0.16
RAB11FIP4-210ENST00000585058 CCDC43Q96MW1 224 aaKnown RBP16.07■□□□□ 0.16
RAB11FIP4-210ENST00000585058 ROCK1Q13464 1354 aa16.07■□□□□ 0.16
RAB11FIP4-210ENST00000585058 NUCB2P80303 420 aa16.06■□□□□ 0.16
RAB11FIP4-210ENST00000585058 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
RAB11FIP4-210ENST00000585058 FANCIQ9NVI1 1328 aa16.05■□□□□ 0.16
RAB11FIP4-210ENST00000585058 SAFBQ15424 915 aaKnown RBP eCLIP16.05■□□□□ 0.16
RAB11FIP4-210ENST00000585058 RRP12Q5JTH9 1297 aaKnown RBP16.05■□□□□ 0.16
RAB11FIP4-210ENST00000585058 C22orf23Q9BZE7 217 aa16.04■□□□□ 0.16
RAB11FIP4-210ENST00000585058 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.04■□□□□ 0.16
RAB11FIP4-210ENST00000585058 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
RAB11FIP4-210ENST00000585058 AK7Q96M32 723 aa16.04■□□□□ 0.16
RAB11FIP4-210ENST00000585058 CT47A1Q5JQC4 288 aaPredicted RBP16.04■□□□□ 0.16
RAB11FIP4-210ENST00000585058 ARGLU1Q9NWB6 273 aaPredicted RBP16.04■□□□□ 0.16
RAB11FIP4-210ENST00000585058 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
RAB11FIP4-210ENST00000585058 TSPYL4Q9UJ04 414 aa16.03■□□□□ 0.16
RAB11FIP4-210ENST00000585058 ERC2O15083 957 aa16.03■□□□□ 0.16
RAB11FIP4-210ENST00000585058 NEUROD6Q96NK8 337 aa16.03■□□□□ 0.16
RAB11FIP4-210ENST00000585058 RALYLQ86SE5 291 aaKnown RBP16.02■□□□□ 0.16
RAB11FIP4-210ENST00000585058 FYB1O15117 783 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms