RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 BCANQ96GW7 911 aa31.26■■■□□ 2.59
TOP3A-218ENST00000584669 ALKQ9UM73 1620 aa31.26■■■□□ 2.59
TOP3A-218ENST00000584669 SLC26A8Q96RN1 970 aa31.24■■■□□ 2.59
TOP3A-218ENST00000584669 SPHKAPQ2M3C7 1700 aa31.24■■■□□ 2.59
TOP3A-218ENST00000584669 CHGAP10645 457 aaKnown RBP31.21■■■□□ 2.59
TOP3A-218ENST00000584669 TMEM131LA2VDJ0 1609 aa31.18■■■□□ 2.58
TOP3A-218ENST00000584669 PPP1R15AO75807 674 aaPredicted RBP31.18■■■□□ 2.58
TOP3A-218ENST00000584669 TRIM52Q96A61 297 aa31.16■■■□□ 2.58
TOP3A-218ENST00000584669 RIMS2Q9UQ26 1411 aa31.15■■■□□ 2.58
TOP3A-218ENST00000584669 KCNA6P17658 529 aa31.15■■■□□ 2.58
TOP3A-218ENST00000584669 XIRP1Q702N8 1843 aaKnown RBP31.13■■■□□ 2.57
TOP3A-218ENST00000584669 TMEM94Q12767 1356 aa31.13■■■□□ 2.57
TOP3A-218ENST00000584669 ZFYVE9O95405 1425 aa31.13■■■□□ 2.57
TOP3A-218ENST00000584669 PROSER2Q86WR7 435 aaPredicted RBP31.12■■■□□ 2.57
TOP3A-218ENST00000584669 HDGFP51858 240 aaKnown RBP31.11■■■□□ 2.57
TOP3A-218ENST00000584669 MED1Q15648 1581 aaPredicted RBP31.11■■■□□ 2.57
TOP3A-218ENST00000584669 RBM33Q96EV2 1170 aaKnown RBP31.1■■■□□ 2.57
TOP3A-218ENST00000584669 PLEKHG1Q9ULL1 1385 aa31.09■■■□□ 2.57
TOP3A-218ENST00000584669 SOCS7O14512 581 aa31.09■■■□□ 2.57
TOP3A-218ENST00000584669 NUTM2DQ5VT03 806 aaPredicted RBP31.07■■■□□ 2.56
TOP3A-218ENST00000584669 CLTCL1P53675 1640 aa31.06■■■□□ 2.56
TOP3A-218ENST00000584669 NKTRP30414 1462 aaKnown RBP31.04■■■□□ 2.56
TOP3A-218ENST00000584669 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.04■■■□□ 2.56
TOP3A-218ENST00000584669 NWD1Q149M9 1564 aa31.04■■■□□ 2.56
TOP3A-218ENST00000584669 SETD5Q9C0A6 1442 aa31.03■■■□□ 2.56
TOP3A-218ENST00000584669 TRPM2O94759 1503 aa31.03■■■□□ 2.56
TOP3A-218ENST00000584669 SLC4A1APQ9BWU0 796 aaKnown RBP31.02■■■□□ 2.56
TOP3A-218ENST00000584669 KIF1BO60333 1816 aa31.02■■■□□ 2.56
TOP3A-218ENST00000584669 PHF23Q9BUL5 403 aaPredicted RBP30.98■■■□□ 2.55
TOP3A-218ENST00000584669 MSH6P52701 1360 aa30.95■■■□□ 2.55
TOP3A-218ENST00000584669 TBX22Q9Y458 520 aa30.95■■■□□ 2.55
TOP3A-218ENST00000584669 RAB3GAP2Q9H2M9 1393 aa30.93■■■□□ 2.54
TOP3A-218ENST00000584669 FAM135BQ49AJ0 1406 aa30.93■■■□□ 2.54
TOP3A-218ENST00000584669 FOXD1Q16676 465 aa30.93■■■□□ 2.54
TOP3A-218ENST00000584669 CHD2O14647 1828 aaKnown RBP30.93■■■□□ 2.54
TOP3A-218ENST00000584669 ADAMTS13Q76LX8 1427 aa30.91■■■□□ 2.54
TOP3A-218ENST00000584669 ZNF326Q5BKZ1 582 aaKnown RBP30.9■■■□□ 2.54
TOP3A-218ENST00000584669 C14orf37Q86TY3 774 aa30.9■■■□□ 2.54
TOP3A-218ENST00000584669 MPHOSPH9Q99550 1183 aa30.9■■■□□ 2.54
TOP3A-218ENST00000584669 DIP2AQ14689 1571 aa30.88■■■□□ 2.53
TOP3A-218ENST00000584669 ROBO1Q9Y6N7 1651 aa30.88■■■□□ 2.53
TOP3A-218ENST00000584669 PIK3R4Q99570 1358 aa30.82■■■□□ 2.52
TOP3A-218ENST00000584669 ACIN1Q9UKV3 1341 aaKnown RBP30.82■■■□□ 2.52
TOP3A-218ENST00000584669 SLAIN2Q9P270 581 aa30.82■■■□□ 2.52
TOP3A-218ENST00000584669 NEXMIFQ5QGS0 1516 aa30.82■■■□□ 2.52
TOP3A-218ENST00000584669 NRXN3Q9Y4C0 1643 aa30.79■■■□□ 2.52
TOP3A-218ENST00000584669 AMOTL2Q9Y2J4 779 aa30.78■■■□□ 2.52
TOP3A-218ENST00000584669 PPLO60437 1756 aa30.77■■■□□ 2.52
TOP3A-218ENST00000584669 PTPRUQ92729 1446 aa30.76■■■□□ 2.51
TOP3A-218ENST00000584669 NCOA3Q9Y6Q9 1424 aa30.76■■■□□ 2.51
TOP3A-218ENST00000584669 SETBP1Q9Y6X0 1596 aa30.74■■■□□ 2.51
TOP3A-218ENST00000584669 CCDC144AA2RUR9 1427 aa30.73■■■□□ 2.51
TOP3A-218ENST00000584669 ATF3P18847 181 aa30.73■■■□□ 2.51
TOP3A-218ENST00000584669 PHLPP1O60346 1717 aa30.71■■■□□ 2.51
TOP3A-218ENST00000584669 C19orf44Q9H6X5 657 aa30.71■■■□□ 2.51
TOP3A-218ENST00000584669 CADPS2Q86UW7 1296 aa30.7■■■□□ 2.51
TOP3A-218ENST00000584669 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.7■■■□□ 2.5
TOP3A-218ENST00000584669 IFT172Q9UG01 1749 aa30.68■■■□□ 2.5
TOP3A-218ENST00000584669 METP08581 1390 aa30.67■■■□□ 2.5
TOP3A-218ENST00000584669 HRCP23327 699 aa30.67■■■□□ 2.5
TOP3A-218ENST00000584669 XRN1Q8IZH2 1706 aaKnown RBP30.66■■■□□ 2.5
TOP3A-218ENST00000584669 SPATA31E1Q6ZUB1 1445 aa30.64■■■□□ 2.5
TOP3A-218ENST00000584669 RGS17Q9UGC6 210 aaPredicted RBP30.63■■■□□ 2.49
TOP3A-218ENST00000584669 SETD1AO15047 1707 aaKnown RBP30.63■■■□□ 2.49
TOP3A-218ENST00000584669 RPGRIP1LQ68CZ1 1315 aa30.62■■■□□ 2.49
TOP3A-218ENST00000584669 JCADQ9P266 1359 aa30.62■■■□□ 2.49
TOP3A-218ENST00000584669 RGL3Q3MIN7 710 aa30.6■■■□□ 2.49
TOP3A-218ENST00000584669 COL16A1Q07092 1604 aaPredicted RBP30.58■■■□□ 2.49
TOP3A-218ENST00000584669 VGFO15240 615 aaPredicted RBP30.58■■■□□ 2.49
TOP3A-218ENST00000584669 DCCP43146 1447 aa30.56■■■□□ 2.48
TOP3A-218ENST00000584669 ANKRD30BQ9BXX2 1392 aa30.55■■■□□ 2.48
TOP3A-218ENST00000584669 BRINP3Q76B58 766 aa30.54■■■□□ 2.48
TOP3A-218ENST00000584669 AHDC1Q5TGY3 1603 aaPredicted RBP30.53■■■□□ 2.48
TOP3A-218ENST00000584669 ADGRL3Q9HAR2 1447 aa30.51■■■□□ 2.47
TOP3A-218ENST00000584669 POTEAQ6S8J7 498 aa30.5■■■□□ 2.47
TOP3A-218ENST00000584669 ADGRF5Q8IZF2 1346 aa30.49■■■□□ 2.47
TOP3A-218ENST00000584669 MST1RQ04912 1400 aa30.49■■■□□ 2.47
TOP3A-218ENST00000584669 ASXL1Q8IXJ9 1541 aa30.47■■■□□ 2.47
TOP3A-218ENST00000584669 MEX3CQ5U5Q3 659 aaKnown RBP30.47■■■□□ 2.47
TOP3A-218ENST00000584669 NALCNQ8IZF0 1738 aa30.46■■■□□ 2.47
TOP3A-218ENST00000584669 SPATA31A6Q5VVP1 1343 aa30.45■■■□□ 2.46
TOP3A-218ENST00000584669 PTCH1Q13635 1447 aa30.43■■■□□ 2.46
TOP3A-218ENST00000584669 LRP6O75581 1613 aa30.43■■■□□ 2.46
TOP3A-218ENST00000584669 ROBO2Q9HCK4 1378 aa30.42■■■□□ 2.46
TOP3A-218ENST00000584669 SHPRHQ149N8 1683 aa30.4■■■□□ 2.46
TOP3A-218ENST00000584669 PIK3C2GO75747 1445 aa30.39■■■□□ 2.46
TOP3A-218ENST00000584669 NUTM2BA6NNL0 878 aaPredicted RBP30.39■■■□□ 2.46
TOP3A-218ENST00000584669 NUTM2EB1AL46 878 aaPredicted RBP30.39■■■□□ 2.46
TOP3A-218ENST00000584669 NUTM2AQ8IVF1 878 aaPredicted RBP30.39■■■□□ 2.46
TOP3A-218ENST00000584669 MYOM2P54296 1465 aa30.38■■■□□ 2.45
TOP3A-218ENST00000584669 DDX17Q92841 729 aaKnown RBP30.37■■■□□ 2.45
TOP3A-218ENST00000584669 NRXN1Q9ULB1 1477 aa30.36■■■□□ 2.45
TOP3A-218ENST00000584669 TRIM26Q12899 539 aaPredicted RBP30.35■■■□□ 2.45
TOP3A-218ENST00000584669 NHSL1Q5SYE7 1610 aa30.35■■■□□ 2.45
TOP3A-218ENST00000584669 C1orf167Q5SNV9 1468 aa30.34■■■□□ 2.45
TOP3A-218ENST00000584669 LAMC1P11047 1609 aa30.33■■■□□ 2.45
TOP3A-218ENST00000584669 PRAG1Q86YV5 1406 aa30.31■■■□□ 2.44
TOP3A-218ENST00000584669 LRRC59Q96AG4 307 aaKnown RBP30.31■■■□□ 2.44
TOP3A-218ENST00000584669 STK26Q9P289 416 aa30.31■■■□□ 2.44
TOP3A-218ENST00000584669 KNDC1Q76NI1 1749 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms