RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 NEXMIFQ5QGS0 1516 aa26.35■■□□□ 1.81
RFFL-211ENST00000584541 DCAF11Q8TEB1 546 aa26.34■■□□□ 1.81
RFFL-211ENST00000584541 STAC3Q96MF2 364 aa26.34■■□□□ 1.81
RFFL-211ENST00000584541 SLIT1O75093 1534 aa26.34■■□□□ 1.81
RFFL-211ENST00000584541 TMEM2Q9UHN6 1383 aa26.33■■□□□ 1.81
RFFL-211ENST00000584541 RIMS2Q9UQ26 1411 aa26.33■■□□□ 1.81
RFFL-211ENST00000584541 ZEB1P37275 1124 aaPredicted RBP26.33■■□□□ 1.81
RFFL-211ENST00000584541 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.32■■□□□ 1.8
RFFL-211ENST00000584541 LMTK3Q96Q04 1460 aa26.31■■□□□ 1.8
RFFL-211ENST00000584541 KDM2AQ9Y2K7 1162 aa26.31■■□□□ 1.8
RFFL-211ENST00000584541 ARHGAP23Q9P227 1491 aa26.3■■□□□ 1.8
RFFL-211ENST00000584541 VGFO15240 615 aaPredicted RBP26.3■■□□□ 1.8
RFFL-211ENST00000584541 EID1Q9Y6B2 187 aa26.3■■□□□ 1.8
RFFL-211ENST00000584541 ZFYVE9O95405 1425 aa26.3■■□□□ 1.8
RFFL-211ENST00000584541 MYOM2P54296 1465 aa26.3■■□□□ 1.8
RFFL-211ENST00000584541 PPP1R15AO75807 674 aaPredicted RBP26.28■■□□□ 1.8
RFFL-211ENST00000584541 POLR1AO95602 1720 aaPredicted RBP26.28■■□□□ 1.8
RFFL-211ENST00000584541 NUTM2DQ5VT03 806 aaPredicted RBP26.25■■□□□ 1.79
RFFL-211ENST00000584541 TXNDC2Q86VQ3 553 aa26.25■■□□□ 1.79
RFFL-211ENST00000584541 SCAF11Q99590 1463 aaKnown RBP26.24■■□□□ 1.79
RFFL-211ENST00000584541 ANKLE2Q86XL3 938 aa26.24■■□□□ 1.79
RFFL-211ENST00000584541 ADGRF5Q8IZF2 1346 aa26.2■■□□□ 1.79
RFFL-211ENST00000584541 NRXN1Q9ULB1 1477 aa26.2■■□□□ 1.78
RFFL-211ENST00000584541 HSPA2P54652 639 aa26.2■■□□□ 1.78
RFFL-211ENST00000584541 LTKP29376 864 aa26.19■■□□□ 1.78
RFFL-211ENST00000584541 PRAG1Q86YV5 1406 aa26.19■■□□□ 1.78
RFFL-211ENST00000584541 BCANQ96GW7 911 aa26.17■■□□□ 1.78
RFFL-211ENST00000584541 PLEKHG1Q9ULL1 1385 aa26.17■■□□□ 1.78
RFFL-211ENST00000584541 LAMC1P11047 1609 aa26.17■■□□□ 1.78
RFFL-211ENST00000584541 PIK3C2GO75747 1445 aa26.16■■□□□ 1.78
RFFL-211ENST00000584541 KIAA1210Q9ULL0 1709 aa26.16■■□□□ 1.78
RFFL-211ENST00000584541 SETBP1Q9Y6X0 1596 aa26.15■■□□□ 1.78
RFFL-211ENST00000584541 IQGAP1P46940 1657 aa26.15■■□□□ 1.78
RFFL-211ENST00000584541 TRPM1Q7Z4N2 1603 aa26.14■■□□□ 1.77
RFFL-211ENST00000584541 NCKAP5LQ9HCH0 1330 aa26.13■■□□□ 1.77
RFFL-211ENST00000584541 MED14O60244 1454 aa26.12■■□□□ 1.77
RFFL-211ENST00000584541 STRCQ7RTU9 1775 aa26.12■■□□□ 1.77
RFFL-211ENST00000584541 NRXN3Q9Y4C0 1643 aa26.11■■□□□ 1.77
RFFL-211ENST00000584541 NBPF8Q3BBV2 869 aa26.11■■□□□ 1.77
RFFL-211ENST00000584541 NPHP4O75161 1426 aaPredicted RBP26.11■■□□□ 1.77
RFFL-211ENST00000584541 SENP3Q9H4L4 574 aaPredicted RBP26.1■■□□□ 1.77
RFFL-211ENST00000584541 ALKQ9UM73 1620 aa26.1■■□□□ 1.77
RFFL-211ENST00000584541 DIP2AQ14689 1571 aa26.09■■□□□ 1.77
RFFL-211ENST00000584541 FBXO41Q8TF61 875 aa26.08■■□□□ 1.77
RFFL-211ENST00000584541 RALGAPBQ86X10 1494 aa26.07■■□□□ 1.76
RFFL-211ENST00000584541 C14orf93Q9H972 538 aaKnown RBP26.07■■□□□ 1.76
RFFL-211ENST00000584541 SETD1AO15047 1707 aaKnown RBP26.06■■□□□ 1.76
RFFL-211ENST00000584541 CFAP70Q5T0N1 1121 aa26.06■■□□□ 1.76
RFFL-211ENST00000584541 ROCK2O75116 1388 aaKnown RBP26.04■■□□□ 1.76
RFFL-211ENST00000584541 ADAMTS13Q76LX8 1427 aa26.04■■□□□ 1.76
RFFL-211ENST00000584541 SLC26A8Q96RN1 970 aa26.02■■□□□ 1.76
RFFL-211ENST00000584541 TBX22Q9Y458 520 aa26.02■■□□□ 1.76
RFFL-211ENST00000584541 DMRT2Q9Y5R5 561 aa26■■□□□ 1.75
RFFL-211ENST00000584541 NBPF1Q3BBV0 1214 aa25.98■■□□□ 1.75
RFFL-211ENST00000584541 ADGRB1O14514 1584 aa25.97■■□□□ 1.75
RFFL-211ENST00000584541 CARD11Q9BXL7 1154 aa25.96■■□□□ 1.75
RFFL-211ENST00000584541 ASXL1Q8IXJ9 1541 aa25.96■■□□□ 1.75
RFFL-211ENST00000584541 GPRASP1Q5JY77 1395 aa25.95■■□□□ 1.75
RFFL-211ENST00000584541 TMEM132EQ6IEE7 984 aa25.95■■□□□ 1.74
RFFL-211ENST00000584541 PIK3R4Q99570 1358 aa25.95■■□□□ 1.74
RFFL-211ENST00000584541 METP08581 1390 aa25.94■■□□□ 1.74
RFFL-211ENST00000584541 CHD2O14647 1828 aaKnown RBP25.93■■□□□ 1.74
RFFL-211ENST00000584541 YTHDC2Q9H6S0 1430 aaKnown RBP25.91■■□□□ 1.74
RFFL-211ENST00000584541 KNDC1Q76NI1 1749 aa25.91■■□□□ 1.74
RFFL-211ENST00000584541 LRPPRCP42704 1394 aaKnown RBP25.89■■□□□ 1.74
RFFL-211ENST00000584541 STK26Q9P289 416 aa25.88■■□□□ 1.73
RFFL-211ENST00000584541 XRN1Q8IZH2 1706 aaKnown RBP25.86■■□□□ 1.73
RFFL-211ENST00000584541 ARHGEF28Q8N1W1 1705 aaKnown RBP25.86■■□□□ 1.73
RFFL-211ENST00000584541 EIF3AQ14152 1382 aaKnown RBP25.86■■□□□ 1.73
RFFL-211ENST00000584541 ABCC11Q96J66 1382 aa25.85■■□□□ 1.73
RFFL-211ENST00000584541 TRAK1Q9UPV9 953 aa25.85■■□□□ 1.73
RFFL-211ENST00000584541 AMOTL2Q9Y2J4 779 aa25.85■■□□□ 1.73
RFFL-211ENST00000584541 PTPRUQ92729 1446 aa25.85■■□□□ 1.73
RFFL-211ENST00000584541 DLC1Q96QB1 1528 aa25.84■■□□□ 1.73
RFFL-211ENST00000584541 NWD1Q149M9 1564 aa25.84■■□□□ 1.73
RFFL-211ENST00000584541 USP47Q96K76 1375 aa25.83■■□□□ 1.73
RFFL-211ENST00000584541 KCNA6P17658 529 aa25.83■■□□□ 1.73
RFFL-211ENST00000584541 EIF4G2P78344 907 aaKnown RBP eCLIP25.83■■□□□ 1.73
RFFL-211ENST00000584541 CPS1P31327 1500 aa25.83■■□□□ 1.72
RFFL-211ENST00000584541 TECPR2O15040 1411 aa25.82■■□□□ 1.72
RFFL-211ENST00000584541 PTCH1Q13635 1447 aa25.79■■□□□ 1.72
RFFL-211ENST00000584541 STRCP1A6NGW2 1772 aa25.78■■□□□ 1.72
RFFL-211ENST00000584541 SIRT1Q96EB6 747 aa25.78■■□□□ 1.72
RFFL-211ENST00000584541 FAM135BQ49AJ0 1406 aa25.78■■□□□ 1.72
RFFL-211ENST00000584541 NKTRP30414 1462 aaKnown RBP25.78■■□□□ 1.72
RFFL-211ENST00000584541 POGKQ9P215 609 aa25.77■■□□□ 1.72
RFFL-211ENST00000584541 QRICH2Q9H0J4 1663 aa25.77■■□□□ 1.72
RFFL-211ENST00000584541 CENPJQ9HC77 1338 aaPredicted RBP25.75■■□□□ 1.71
RFFL-211ENST00000584541 ROBO2Q9HCK4 1378 aa25.74■■□□□ 1.71
RFFL-211ENST00000584541 HSPA5P11021 654 aaKnown RBP25.74■■□□□ 1.71
RFFL-211ENST00000584541 PRAM1Q96QH2 718 aa25.74■■□□□ 1.71
RFFL-211ENST00000584541 ZNF335Q9H4Z2 1342 aaPredicted RBP25.73■■□□□ 1.71
RFFL-211ENST00000584541 ST20-MTHFSA0A0A6YYL1 179 aa25.72■■□□□ 1.71
RFFL-211ENST00000584541 WAPLQ7Z5K2 1190 aa25.7■■□□□ 1.7
RFFL-211ENST00000584541 PROSER2Q86WR7 435 aaPredicted RBP25.7■■□□□ 1.7
RFFL-211ENST00000584541 SAFB2Q14151 953 aaKnown RBP eCLIP25.69■■□□□ 1.7
RFFL-211ENST00000584541 SLC24A1O60721 1099 aa25.68■■□□□ 1.7
RFFL-211ENST00000584541 PLEKHH1Q9ULM0 1364 aa25.68■■□□□ 1.7
RFFL-211ENST00000584541 SBNO2Q9Y2G9 1366 aa25.66■■□□□ 1.7
RFFL-211ENST00000584541 HIRIP3Q9BW71 556 aaPredicted RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms