RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 ZFYVE9O95405 1425 aa40.44■■■■■ 4.06
SMARCD2-210ENST00000584400 BCANQ96GW7 911 aa40.44■■■■■ 4.06
SMARCD2-210ENST00000584400 TRPM2O94759 1503 aa40.42■■■■■ 4.06
SMARCD2-210ENST00000584400 PLEKHG1Q9ULL1 1385 aa40.38■■■■■ 4.06
SMARCD2-210ENST00000584400 MPHOSPH9Q99550 1183 aa40.38■■■■■ 4.05
SMARCD2-210ENST00000584400 ZNF326Q5BKZ1 582 aaKnown RBP40.34■■■■■ 4.05
SMARCD2-210ENST00000584400 SLC26A8Q96RN1 970 aa40.34■■■■■ 4.05
SMARCD2-210ENST00000584400 RAB3GAP2Q9H2M9 1393 aa40.33■■■■■ 4.05
SMARCD2-210ENST00000584400 MYO5BQ9ULV0 1848 aa40.32■■■■■ 4.05
SMARCD2-210ENST00000584400 CLTCL1P53675 1640 aa40.28■■■■■ 4.04
SMARCD2-210ENST00000584400 UBAP1LF5GYI3 381 aa40.27■■■■■ 4.04
SMARCD2-210ENST00000584400 NUTM2DQ5VT03 806 aaPredicted RBP40.26■■■■■ 4.04
SMARCD2-210ENST00000584400 KCNA6P17658 529 aa40.25■■■■■ 4.03
SMARCD2-210ENST00000584400 HRCP23327 699 aa40.24■■■■■ 4.03
SMARCD2-210ENST00000584400 FOXD1Q16676 465 aa40.24■■■■■ 4.03
SMARCD2-210ENST00000584400 TBX22Q9Y458 520 aa40.24■■■■■ 4.03
SMARCD2-210ENST00000584400 LRRC7Q96NW7 1537 aa40.21■■■■■ 4.03
SMARCD2-210ENST00000584400 TOM1O60784 492 aa40.2■■■■■ 4.03
SMARCD2-210ENST00000584400 SENP3Q9H4L4 574 aaPredicted RBP40.2■■■■■ 4.03
SMARCD2-210ENST00000584400 CCDC144AA2RUR9 1427 aa40.19■■■■■ 4.02
SMARCD2-210ENST00000584400 KIF1BO60333 1816 aa40.16■■■■■ 4.02
SMARCD2-210ENST00000584400 STRCP1A6NGW2 1772 aa40.16■■■■■ 4.02
SMARCD2-210ENST00000584400 RPGRIP1LQ68CZ1 1315 aa40.15■■■■■ 4.02
SMARCD2-210ENST00000584400 DIP2AQ14689 1571 aa40.14■■■■■ 4.02
SMARCD2-210ENST00000584400 ADAMTS13Q76LX8 1427 aa40.12■■■■■ 4.01
SMARCD2-210ENST00000584400 PIK3R4Q99570 1358 aa40.11■■■■■ 4.01
SMARCD2-210ENST00000584400 VGFO15240 615 aaPredicted RBP40.11■■■■■ 4.01
SMARCD2-210ENST00000584400 NKTRP30414 1462 aaKnown RBP40.09■■■■■ 4.01
SMARCD2-210ENST00000584400 NEXMIFQ5QGS0 1516 aa40.08■■■■■ 4.01
SMARCD2-210ENST00000584400 PROSER2Q86WR7 435 aaPredicted RBP40.08■■■■■ 4.01
SMARCD2-210ENST00000584400 NWD1Q149M9 1564 aa40.06■■■■■ 4
SMARCD2-210ENST00000584400 SETBP1Q9Y6X0 1596 aa40.03■■■■■ 4
SMARCD2-210ENST00000584400 TMEM94Q12767 1356 aa40.03■■■■■ 4
SMARCD2-210ENST00000584400 SCAF1Q9H7N4 1312 aaKnown RBP40■■■■□ 3.99
SMARCD2-210ENST00000584400 PIP4K2BP78356 416 aa39.98■■■■□ 3.99
SMARCD2-210ENST00000584400 RGL3Q3MIN7 710 aa39.96■■■■□ 3.99
SMARCD2-210ENST00000584400 SPATA31E1Q6ZUB1 1445 aa39.95■■■■□ 3.99
SMARCD2-210ENST00000584400 CHD2O14647 1828 aaKnown RBP39.95■■■■□ 3.99
SMARCD2-210ENST00000584400 AMOTL2Q9Y2J4 779 aa39.93■■■■□ 3.98
SMARCD2-210ENST00000584400 NRXN3Q9Y4C0 1643 aa39.91■■■■□ 3.98
SMARCD2-210ENST00000584400 ANKRD30BQ9BXX2 1392 aa39.91■■■■□ 3.98
SMARCD2-210ENST00000584400 NCOA3Q9Y6Q9 1424 aa39.91■■■■□ 3.98
SMARCD2-210ENST00000584400 MSH6P52701 1360 aa39.88■■■■□ 3.97
SMARCD2-210ENST00000584400 RBM33Q96EV2 1170 aaKnown RBP39.88■■■■□ 3.97
SMARCD2-210ENST00000584400 METP08581 1390 aa39.85■■■■□ 3.97
SMARCD2-210ENST00000584400 C14orf37Q86TY3 774 aa39.84■■■■□ 3.97
SMARCD2-210ENST00000584400 PTPRUQ92729 1446 aa39.83■■■■□ 3.97
SMARCD2-210ENST00000584400 PPLO60437 1756 aa39.83■■■■□ 3.97
SMARCD2-210ENST00000584400 XIRP1Q702N8 1843 aaKnown RBP39.83■■■■□ 3.97
SMARCD2-210ENST00000584400 ALKQ9UM73 1620 aa39.81■■■■□ 3.96
SMARCD2-210ENST00000584400 ADGRF5Q8IZF2 1346 aa39.77■■■■□ 3.96
SMARCD2-210ENST00000584400 C19orf44Q9H6X5 657 aa39.75■■■■□ 3.95
SMARCD2-210ENST00000584400 XRN1Q8IZH2 1706 aaKnown RBP39.72■■■■□ 3.95
SMARCD2-210ENST00000584400 HSPA1LP34931 641 aa39.72■■■■□ 3.95
SMARCD2-210ENST00000584400 CADPS2Q86UW7 1296 aa39.7■■■■□ 3.95
SMARCD2-210ENST00000584400 FAM135BQ49AJ0 1406 aa39.69■■■■□ 3.94
SMARCD2-210ENST00000584400 ATF3P18847 181 aa39.68■■■■□ 3.94
SMARCD2-210ENST00000584400 IFT172Q9UG01 1749 aa39.68■■■■□ 3.94
SMARCD2-210ENST00000584400 TRIM26Q12899 539 aaPredicted RBP39.67■■■■□ 3.94
SMARCD2-210ENST00000584400 SLAIN2Q9P270 581 aa39.66■■■■□ 3.94
SMARCD2-210ENST00000584400 PIK3C2GO75747 1445 aa39.65■■■■□ 3.94
SMARCD2-210ENST00000584400 MYOM2P54296 1465 aa39.64■■■■□ 3.94
SMARCD2-210ENST00000584400 STAC3Q96MF2 364 aa39.64■■■■□ 3.94
SMARCD2-210ENST00000584400 PTCH1Q13635 1447 aa39.63■■■■□ 3.93
SMARCD2-210ENST00000584400 SETD1AO15047 1707 aaKnown RBP39.62■■■■□ 3.93
SMARCD2-210ENST00000584400 PRAG1Q86YV5 1406 aa39.6■■■■□ 3.93
SMARCD2-210ENST00000584400 DCCP43146 1447 aa39.59■■■■□ 3.93
SMARCD2-210ENST00000584400 NRXN1Q9ULB1 1477 aa39.57■■■■□ 3.93
SMARCD2-210ENST00000584400 C14orf93Q9H972 538 aaKnown RBP39.57■■■■□ 3.93
SMARCD2-210ENST00000584400 DCAF11Q8TEB1 546 aa39.54■■■■□ 3.92
SMARCD2-210ENST00000584400 ROBO2Q9HCK4 1378 aa39.53■■■■□ 3.92
SMARCD2-210ENST00000584400 ADGRL3Q9HAR2 1447 aa39.53■■■■□ 3.92
SMARCD2-210ENST00000584400 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.53■■■■□ 3.92
SMARCD2-210ENST00000584400 LRPPRCP42704 1394 aaKnown RBP39.51■■■■□ 3.92
SMARCD2-210ENST00000584400 TMEM132EQ6IEE7 984 aa39.49■■■■□ 3.91
SMARCD2-210ENST00000584400 KDM2AQ9Y2K7 1162 aa39.49■■■■□ 3.91
SMARCD2-210ENST00000584400 ROBO1Q9Y6N7 1651 aa39.48■■■■□ 3.91
SMARCD2-210ENST00000584400 STK26Q9P289 416 aa39.48■■■■□ 3.91
SMARCD2-210ENST00000584400 ABCC11Q96J66 1382 aa39.47■■■■□ 3.91
SMARCD2-210ENST00000584400 CFAP70Q5T0N1 1121 aa39.47■■■■□ 3.91
SMARCD2-210ENST00000584400 LAMC1P11047 1609 aa39.46■■■■□ 3.91
SMARCD2-210ENST00000584400 TECPR2O15040 1411 aa39.46■■■■□ 3.91
SMARCD2-210ENST00000584400 DHX57Q6P158 1386 aaKnown RBP39.46■■■■□ 3.91
SMARCD2-210ENST00000584400 YTHDC2Q9H6S0 1430 aaKnown RBP39.43■■■■□ 3.9
SMARCD2-210ENST00000584400 ASXL1Q8IXJ9 1541 aa39.4■■■■□ 3.9
SMARCD2-210ENST00000584400 SIRT1Q96EB6 747 aa39.4■■■■□ 3.9
SMARCD2-210ENST00000584400 DISP3Q9P2K9 1392 aa39.37■■■■□ 3.89
SMARCD2-210ENST00000584400 MST1RQ04912 1400 aa39.37■■■■□ 3.89
SMARCD2-210ENST00000584400 NALCNQ8IZF0 1738 aa39.35■■■■□ 3.89
SMARCD2-210ENST00000584400 BRINP3Q76B58 766 aa39.34■■■■□ 3.89
SMARCD2-210ENST00000584400 WAPLQ7Z5K2 1190 aa39.33■■■■□ 3.89
SMARCD2-210ENST00000584400 KNDC1Q76NI1 1749 aa39.32■■■■□ 3.89
SMARCD2-210ENST00000584400 C1orf167Q5SNV9 1468 aa39.24■■■■□ 3.87
SMARCD2-210ENST00000584400 PHLPP1O60346 1717 aa39.23■■■■□ 3.87
SMARCD2-210ENST00000584400 PLEKHH1Q9ULM0 1364 aa39.23■■■■□ 3.87
SMARCD2-210ENST00000584400 SIN3AQ96ST3 1273 aa39.23■■■■□ 3.87
SMARCD2-210ENST00000584400 ADGRB1O14514 1584 aa39.23■■■■□ 3.87
SMARCD2-210ENST00000584400 AHDC1Q5TGY3 1603 aaPredicted RBP39.22■■■■□ 3.87
SMARCD2-210ENST00000584400 CDC42BPGQ6DT37 1551 aa39.22■■■■□ 3.87
SMARCD2-210ENST00000584400 POGKQ9P215 609 aa39.22■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms